| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643481
Identifier: 148643481
GI number: 148643481
Start: 1448793
End: 1450577
Strand: Reverse
Name: 148643481
Synonym: Msm_1421
Alternate gene names: NA
Gene position: 1450577-1448793 (Counterclockwise)
Preceding gene: 148643482
Following gene: 148643478
Centisome position: 78.28
GC content: 33.05
Gene sequence:
>1785_bases ATGGTTAATAAAAAGATAGTAACCATCTTCCTTCTACTTTTTTTAATAACATCAACAATCTCTTGTGTTTATGCAGATGA CGATGACAGAAGCTATTCCATTACACAGGCACTTGTAGACATCATAGTTGATACAAACGGAATGCTCCATATAAATGAAA CCTTTGACTATTCATTTGACGGAACATTTAATGGAGTTTACAGAGACATACCCCTGAAAGAGGGAGAAAGTATTTCAAAT ATTCATGTATCAGCAGAAGGTGCATATACAAAAGTAGAGCAACATCAGGAAGATGGAACTCAGCATATAAAAATTTATTT ATATTCAGATGCTGCCAAAACCCAACCAATAAGTGATACAAATGTTAAAGTCCATATCAGCTACGATATGAAAAATGTAG TGACTGTTTATCAGGACACTGCATCTCTACAGTATCAGCTTTGGGGAGACCAGTGGGCAGTAGGAGTTGATGAATTAATA ACAACAATACATTTACCTAATGATAATGGTAATGAATACTGGTTAAATCCTACAAAATATACCAAAACCAGCTCATTAGA CGGAAATACAATAACTTCAACCAGCAATTACATAGATTCTGGAAACTTTTACGAGATTGAAGTTTTAATGCCTGAAAGTG ACTTTGCAAACTCACCAAATGCAATCCATATTGATAAAGCAGCTAAAAAAGAAATAGAACAACGTTACAATGATTATCAG GCAAATGAAAAAATGTGGGACAATATCGGATCACTTATAGGAATACTGTTTATTATAAGTCCAGTAATTCCATTTTTTAT TTACCGCAAATATGGTGTAGAACCTAAAGTTAATTATGAAGGAATTTATGAAAGGGATCTTCCAAGTAACGACCCCCCAG CTGTAGTTAATGCATTAATCCAAAAAAGATACAATATTGGAACTCCTGATTTAAAAGGATTTGAAGCTACAATAATGGAT TTGATTAATCGTAAAATATTTAAAATTAAATCAAATGAAGAAAAACATTTAATTATAGAATTAGATGAAACAAACTACGA CAGTTTAACATTAGATGAAAAAGATGTTTTCGATATCTTCAAAACAATAGCTAAAGACAATCTCTTGGATTTAAGTAATG TTAAAGATTATTTATCCGATGAACATAATGCGGAATGGTTCAACAACAGAATCAAATCATGGAAAAATGATGTTGCCTAC GAACATTTATCAAAATCCAGATTGAAACAATTCTTTAATAACGAAGGAAATAAAATAGCTACTTACTATTCAATAGCTTG TATAATTATTGGAGTTCTGTTTGGTTCATTATTCTATCTGGAAAATGGTTTAAATACAACTGGAGGAACAATTGGACTTA TAGGATCAGTATTTTTATTTATTTCAGGATTTGTGATTTACATGTTGCCCGAAGATATCTTCGGACAATGGACAAAAGAA GGCAGACTATATATGCTAAAGTGGAAAAACTTTAAGAAGTTTTTAAGTGACAACAGTTTAATGAAAGAACACCCTCCTGA ATCAATAGTTATATGGAATCAATATCTCGTATATGCAACAGCTCTTGGAGTAGCTGATAAGGTTTACGAATCCATGAAAC TGCATGTTGGTGAAGGAAACATTGATGACGATTATCTTGATTCATACTACTATTATGGAACAGGATATTACATGATGCAT AATGCAATAGATACCGGAATACAAACAGCAAATGCAAATTCAGACAGCTCCGGCTTTGGTGGCGTTGGTGGAGGTTCCGG CGGAGGAGGTGGAGGAGCATTCTAG
Upstream 100 bases:
>100_bases TTATTGCAGGAATGTTTAATTTTAAAGAAGCTGACTTTTTTGAAATAGCCAGTGGTGAAAGGGAAGCACCTAAAGTGCAA TTTTAAGGGAGATTAAATAT
Downstream 100 bases:
>100_bases ATTCCCATCTCTTTTTTAAATGGTTCAGTGTGTCTACATTTAGGAAAACCACTGCATCCTACAAATAAACTATTATCCTC ACCATTAACCCTTTTTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 594; Mature: 594
Protein sequence:
>594_residues MVNKKIVTIFLLLFLITSTISCVYADDDDRSYSITQALVDIIVDTNGMLHINETFDYSFDGTFNGVYRDIPLKEGESISN IHVSAEGAYTKVEQHQEDGTQHIKIYLYSDAAKTQPISDTNVKVHISYDMKNVVTVYQDTASLQYQLWGDQWAVGVDELI TTIHLPNDNGNEYWLNPTKYTKTSSLDGNTITSTSNYIDSGNFYEIEVLMPESDFANSPNAIHIDKAAKKEIEQRYNDYQ ANEKMWDNIGSLIGILFIISPVIPFFIYRKYGVEPKVNYEGIYERDLPSNDPPAVVNALIQKRYNIGTPDLKGFEATIMD LINRKIFKIKSNEEKHLIIELDETNYDSLTLDEKDVFDIFKTIAKDNLLDLSNVKDYLSDEHNAEWFNNRIKSWKNDVAY EHLSKSRLKQFFNNEGNKIATYYSIACIIIGVLFGSLFYLENGLNTTGGTIGLIGSVFLFISGFVIYMLPEDIFGQWTKE GRLYMLKWKNFKKFLSDNSLMKEHPPESIVIWNQYLVYATALGVADKVYESMKLHVGEGNIDDDYLDSYYYYGTGYYMMH NAIDTGIQTANANSDSSGFGGVGGGSGGGGGGAF
Sequences:
>Translated_594_residues MVNKKIVTIFLLLFLITSTISCVYADDDDRSYSITQALVDIIVDTNGMLHINETFDYSFDGTFNGVYRDIPLKEGESISN IHVSAEGAYTKVEQHQEDGTQHIKIYLYSDAAKTQPISDTNVKVHISYDMKNVVTVYQDTASLQYQLWGDQWAVGVDELI TTIHLPNDNGNEYWLNPTKYTKTSSLDGNTITSTSNYIDSGNFYEIEVLMPESDFANSPNAIHIDKAAKKEIEQRYNDYQ ANEKMWDNIGSLIGILFIISPVIPFFIYRKYGVEPKVNYEGIYERDLPSNDPPAVVNALIQKRYNIGTPDLKGFEATIMD LINRKIFKIKSNEEKHLIIELDETNYDSLTLDEKDVFDIFKTIAKDNLLDLSNVKDYLSDEHNAEWFNNRIKSWKNDVAY EHLSKSRLKQFFNNEGNKIATYYSIACIIIGVLFGSLFYLENGLNTTGGTIGLIGSVFLFISGFVIYMLPEDIFGQWTKE GRLYMLKWKNFKKFLSDNSLMKEHPPESIVIWNQYLVYATALGVADKVYESMKLHVGEGNIDDDYLDSYYYYGTGYYMMH NAIDTGIQTANANSDSSGFGGVGGGSGGGGGGAF >Mature_594_residues MVNKKIVTIFLLLFLITSTISCVYADDDDRSYSITQALVDIIVDTNGMLHINETFDYSFDGTFNGVYRDIPLKEGESISN IHVSAEGAYTKVEQHQEDGTQHIKIYLYSDAAKTQPISDTNVKVHISYDMKNVVTVYQDTASLQYQLWGDQWAVGVDELI TTIHLPNDNGNEYWLNPTKYTKTSSLDGNTITSTSNYIDSGNFYEIEVLMPESDFANSPNAIHIDKAAKKEIEQRYNDYQ ANEKMWDNIGSLIGILFIISPVIPFFIYRKYGVEPKVNYEGIYERDLPSNDPPAVVNALIQKRYNIGTPDLKGFEATIMD LINRKIFKIKSNEEKHLIIELDETNYDSLTLDEKDVFDIFKTIAKDNLLDLSNVKDYLSDEHNAEWFNNRIKSWKNDVAY EHLSKSRLKQFFNNEGNKIATYYSIACIIIGVLFGSLFYLENGLNTTGGTIGLIGSVFLFISGFVIYMLPEDIFGQWTKE GRLYMLKWKNFKKFLSDNSLMKEHPPESIVIWNQYLVYATALGVADKVYESMKLHVGEGNIDDDYLDSYYYYGTGYYMMH NAIDTGIQTANANSDSSGFGGVGGGSGGGGGGAF
Specific function: Unknown
COG id: COG4907
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018702 [H]
Pfam domain/function: PF09972 DUF2207 [H]
EC number: NA
Molecular weight: Translated: 67202; Mature: 67202
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00144 ASN_GLN_ASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNKKIVTIFLLLFLITSTISCVYADDDDRSYSITQALVDIIVDTNGMLHINETFDYSFD CCCCHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEECC GTFNGVYRDIPLKEGESISNIHVSAEGAYTKVEQHQEDGTQHIKIYLYSDAAKTQPISDT CCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCC NVKVHISYDMKNVVTVYQDTASLQYQLWGDQWAVGVDELITTIHLPNDNGNEYWLNPTKY CEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHEEECCCCCCCEEEECCCCC TKTSSLDGNTITSTSNYIDSGNFYEIEVLMPESDFANSPNAIHIDKAAKKEIEQRYNDYQ CCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHC ANEKMWDNIGSLIGILFIISPVIPFFIYRKYGVEPKVNYEGIYERDLPSNDPPAVVNALI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHH QKRYNIGTPDLKGFEATIMDLINRKIFKIKSNEEKHLIIELDETNYDSLTLDEKDVFDIF HHHCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCEECCHHHHHHHH KTIAKDNLLDLSNVKDYLSDEHNAEWFNNRIKSWKNDVAYEHLSKSRLKQFFNNEGNKIA HHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE TYYSIACIIIGVLFGSLFYLENGLNTTGGTIGLIGSVFLFISGFVIYMLPEDIFGQWTKE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHCCCCCC GRLYMLKWKNFKKFLSDNSLMKEHPPESIVIWNQYLVYATALGVADKVYESMKLHVGEGN CCEEEEEEHHHHHHHCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEECCCC IDDDYLDSYYYYGTGYYMMHNAIDTGIQTANANSDSSGFGGVGGGSGGGGGGAF CCHHHHCCEEEEECEEEEEEHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVNKKIVTIFLLLFLITSTISCVYADDDDRSYSITQALVDIIVDTNGMLHINETFDYSFD CCCCHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEECC GTFNGVYRDIPLKEGESISNIHVSAEGAYTKVEQHQEDGTQHIKIYLYSDAAKTQPISDT CCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCC NVKVHISYDMKNVVTVYQDTASLQYQLWGDQWAVGVDELITTIHLPNDNGNEYWLNPTKY CEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHEEECCCCCCCEEEECCCCC TKTSSLDGNTITSTSNYIDSGNFYEIEVLMPESDFANSPNAIHIDKAAKKEIEQRYNDYQ CCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHC ANEKMWDNIGSLIGILFIISPVIPFFIYRKYGVEPKVNYEGIYERDLPSNDPPAVVNALI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHH QKRYNIGTPDLKGFEATIMDLINRKIFKIKSNEEKHLIIELDETNYDSLTLDEKDVFDIF HHHCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCEECCHHHHHHHH KTIAKDNLLDLSNVKDYLSDEHNAEWFNNRIKSWKNDVAYEHLSKSRLKQFFNNEGNKIA HHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE TYYSIACIIIGVLFGSLFYLENGLNTTGGTIGLIGSVFLFISGFVIYMLPEDIFGQWTKE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHCCCCCC GRLYMLKWKNFKKFLSDNSLMKEHPPESIVIWNQYLVYATALGVADKVYESMKLHVGEGN CCEEEEEEHHHHHHHCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEECCCC IDDDYLDSYYYYGTGYYMMHNAIDTGIQTANANSDSSGFGGVGGGSGGGGGGAF CCHHHHCCEEEEECEEEEEEHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]