Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148643481

Identifier: 148643481

GI number: 148643481

Start: 1448793

End: 1450577

Strand: Reverse

Name: 148643481

Synonym: Msm_1421

Alternate gene names: NA

Gene position: 1450577-1448793 (Counterclockwise)

Preceding gene: 148643482

Following gene: 148643478

Centisome position: 78.28

GC content: 33.05

Gene sequence:

>1785_bases
ATGGTTAATAAAAAGATAGTAACCATCTTCCTTCTACTTTTTTTAATAACATCAACAATCTCTTGTGTTTATGCAGATGA
CGATGACAGAAGCTATTCCATTACACAGGCACTTGTAGACATCATAGTTGATACAAACGGAATGCTCCATATAAATGAAA
CCTTTGACTATTCATTTGACGGAACATTTAATGGAGTTTACAGAGACATACCCCTGAAAGAGGGAGAAAGTATTTCAAAT
ATTCATGTATCAGCAGAAGGTGCATATACAAAAGTAGAGCAACATCAGGAAGATGGAACTCAGCATATAAAAATTTATTT
ATATTCAGATGCTGCCAAAACCCAACCAATAAGTGATACAAATGTTAAAGTCCATATCAGCTACGATATGAAAAATGTAG
TGACTGTTTATCAGGACACTGCATCTCTACAGTATCAGCTTTGGGGAGACCAGTGGGCAGTAGGAGTTGATGAATTAATA
ACAACAATACATTTACCTAATGATAATGGTAATGAATACTGGTTAAATCCTACAAAATATACCAAAACCAGCTCATTAGA
CGGAAATACAATAACTTCAACCAGCAATTACATAGATTCTGGAAACTTTTACGAGATTGAAGTTTTAATGCCTGAAAGTG
ACTTTGCAAACTCACCAAATGCAATCCATATTGATAAAGCAGCTAAAAAAGAAATAGAACAACGTTACAATGATTATCAG
GCAAATGAAAAAATGTGGGACAATATCGGATCACTTATAGGAATACTGTTTATTATAAGTCCAGTAATTCCATTTTTTAT
TTACCGCAAATATGGTGTAGAACCTAAAGTTAATTATGAAGGAATTTATGAAAGGGATCTTCCAAGTAACGACCCCCCAG
CTGTAGTTAATGCATTAATCCAAAAAAGATACAATATTGGAACTCCTGATTTAAAAGGATTTGAAGCTACAATAATGGAT
TTGATTAATCGTAAAATATTTAAAATTAAATCAAATGAAGAAAAACATTTAATTATAGAATTAGATGAAACAAACTACGA
CAGTTTAACATTAGATGAAAAAGATGTTTTCGATATCTTCAAAACAATAGCTAAAGACAATCTCTTGGATTTAAGTAATG
TTAAAGATTATTTATCCGATGAACATAATGCGGAATGGTTCAACAACAGAATCAAATCATGGAAAAATGATGTTGCCTAC
GAACATTTATCAAAATCCAGATTGAAACAATTCTTTAATAACGAAGGAAATAAAATAGCTACTTACTATTCAATAGCTTG
TATAATTATTGGAGTTCTGTTTGGTTCATTATTCTATCTGGAAAATGGTTTAAATACAACTGGAGGAACAATTGGACTTA
TAGGATCAGTATTTTTATTTATTTCAGGATTTGTGATTTACATGTTGCCCGAAGATATCTTCGGACAATGGACAAAAGAA
GGCAGACTATATATGCTAAAGTGGAAAAACTTTAAGAAGTTTTTAAGTGACAACAGTTTAATGAAAGAACACCCTCCTGA
ATCAATAGTTATATGGAATCAATATCTCGTATATGCAACAGCTCTTGGAGTAGCTGATAAGGTTTACGAATCCATGAAAC
TGCATGTTGGTGAAGGAAACATTGATGACGATTATCTTGATTCATACTACTATTATGGAACAGGATATTACATGATGCAT
AATGCAATAGATACCGGAATACAAACAGCAAATGCAAATTCAGACAGCTCCGGCTTTGGTGGCGTTGGTGGAGGTTCCGG
CGGAGGAGGTGGAGGAGCATTCTAG

Upstream 100 bases:

>100_bases
TTATTGCAGGAATGTTTAATTTTAAAGAAGCTGACTTTTTTGAAATAGCCAGTGGTGAAAGGGAAGCACCTAAAGTGCAA
TTTTAAGGGAGATTAAATAT

Downstream 100 bases:

>100_bases
ATTCCCATCTCTTTTTTAAATGGTTCAGTGTGTCTACATTTAGGAAAACCACTGCATCCTACAAATAAACTATTATCCTC
ACCATTAACCCTTTTTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 594; Mature: 594

Protein sequence:

>594_residues
MVNKKIVTIFLLLFLITSTISCVYADDDDRSYSITQALVDIIVDTNGMLHINETFDYSFDGTFNGVYRDIPLKEGESISN
IHVSAEGAYTKVEQHQEDGTQHIKIYLYSDAAKTQPISDTNVKVHISYDMKNVVTVYQDTASLQYQLWGDQWAVGVDELI
TTIHLPNDNGNEYWLNPTKYTKTSSLDGNTITSTSNYIDSGNFYEIEVLMPESDFANSPNAIHIDKAAKKEIEQRYNDYQ
ANEKMWDNIGSLIGILFIISPVIPFFIYRKYGVEPKVNYEGIYERDLPSNDPPAVVNALIQKRYNIGTPDLKGFEATIMD
LINRKIFKIKSNEEKHLIIELDETNYDSLTLDEKDVFDIFKTIAKDNLLDLSNVKDYLSDEHNAEWFNNRIKSWKNDVAY
EHLSKSRLKQFFNNEGNKIATYYSIACIIIGVLFGSLFYLENGLNTTGGTIGLIGSVFLFISGFVIYMLPEDIFGQWTKE
GRLYMLKWKNFKKFLSDNSLMKEHPPESIVIWNQYLVYATALGVADKVYESMKLHVGEGNIDDDYLDSYYYYGTGYYMMH
NAIDTGIQTANANSDSSGFGGVGGGSGGGGGGAF

Sequences:

>Translated_594_residues
MVNKKIVTIFLLLFLITSTISCVYADDDDRSYSITQALVDIIVDTNGMLHINETFDYSFDGTFNGVYRDIPLKEGESISN
IHVSAEGAYTKVEQHQEDGTQHIKIYLYSDAAKTQPISDTNVKVHISYDMKNVVTVYQDTASLQYQLWGDQWAVGVDELI
TTIHLPNDNGNEYWLNPTKYTKTSSLDGNTITSTSNYIDSGNFYEIEVLMPESDFANSPNAIHIDKAAKKEIEQRYNDYQ
ANEKMWDNIGSLIGILFIISPVIPFFIYRKYGVEPKVNYEGIYERDLPSNDPPAVVNALIQKRYNIGTPDLKGFEATIMD
LINRKIFKIKSNEEKHLIIELDETNYDSLTLDEKDVFDIFKTIAKDNLLDLSNVKDYLSDEHNAEWFNNRIKSWKNDVAY
EHLSKSRLKQFFNNEGNKIATYYSIACIIIGVLFGSLFYLENGLNTTGGTIGLIGSVFLFISGFVIYMLPEDIFGQWTKE
GRLYMLKWKNFKKFLSDNSLMKEHPPESIVIWNQYLVYATALGVADKVYESMKLHVGEGNIDDDYLDSYYYYGTGYYMMH
NAIDTGIQTANANSDSSGFGGVGGGSGGGGGGAF
>Mature_594_residues
MVNKKIVTIFLLLFLITSTISCVYADDDDRSYSITQALVDIIVDTNGMLHINETFDYSFDGTFNGVYRDIPLKEGESISN
IHVSAEGAYTKVEQHQEDGTQHIKIYLYSDAAKTQPISDTNVKVHISYDMKNVVTVYQDTASLQYQLWGDQWAVGVDELI
TTIHLPNDNGNEYWLNPTKYTKTSSLDGNTITSTSNYIDSGNFYEIEVLMPESDFANSPNAIHIDKAAKKEIEQRYNDYQ
ANEKMWDNIGSLIGILFIISPVIPFFIYRKYGVEPKVNYEGIYERDLPSNDPPAVVNALIQKRYNIGTPDLKGFEATIMD
LINRKIFKIKSNEEKHLIIELDETNYDSLTLDEKDVFDIFKTIAKDNLLDLSNVKDYLSDEHNAEWFNNRIKSWKNDVAY
EHLSKSRLKQFFNNEGNKIATYYSIACIIIGVLFGSLFYLENGLNTTGGTIGLIGSVFLFISGFVIYMLPEDIFGQWTKE
GRLYMLKWKNFKKFLSDNSLMKEHPPESIVIWNQYLVYATALGVADKVYESMKLHVGEGNIDDDYLDSYYYYGTGYYMMH
NAIDTGIQTANANSDSSGFGGVGGGSGGGGGGAF

Specific function: Unknown

COG id: COG4907

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018702 [H]

Pfam domain/function: PF09972 DUF2207 [H]

EC number: NA

Molecular weight: Translated: 67202; Mature: 67202

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00144 ASN_GLN_ASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNKKIVTIFLLLFLITSTISCVYADDDDRSYSITQALVDIIVDTNGMLHINETFDYSFD
CCCCHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEECC
GTFNGVYRDIPLKEGESISNIHVSAEGAYTKVEQHQEDGTQHIKIYLYSDAAKTQPISDT
CCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCC
NVKVHISYDMKNVVTVYQDTASLQYQLWGDQWAVGVDELITTIHLPNDNGNEYWLNPTKY
CEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHEEECCCCCCCEEEECCCCC
TKTSSLDGNTITSTSNYIDSGNFYEIEVLMPESDFANSPNAIHIDKAAKKEIEQRYNDYQ
CCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHC
ANEKMWDNIGSLIGILFIISPVIPFFIYRKYGVEPKVNYEGIYERDLPSNDPPAVVNALI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHH
QKRYNIGTPDLKGFEATIMDLINRKIFKIKSNEEKHLIIELDETNYDSLTLDEKDVFDIF
HHHCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCEECCHHHHHHHH
KTIAKDNLLDLSNVKDYLSDEHNAEWFNNRIKSWKNDVAYEHLSKSRLKQFFNNEGNKIA
HHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
TYYSIACIIIGVLFGSLFYLENGLNTTGGTIGLIGSVFLFISGFVIYMLPEDIFGQWTKE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHCCCCCC
GRLYMLKWKNFKKFLSDNSLMKEHPPESIVIWNQYLVYATALGVADKVYESMKLHVGEGN
CCEEEEEEHHHHHHHCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEECCCC
IDDDYLDSYYYYGTGYYMMHNAIDTGIQTANANSDSSGFGGVGGGSGGGGGGAF
CCHHHHCCEEEEECEEEEEEHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVNKKIVTIFLLLFLITSTISCVYADDDDRSYSITQALVDIIVDTNGMLHINETFDYSFD
CCCCHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEECC
GTFNGVYRDIPLKEGESISNIHVSAEGAYTKVEQHQEDGTQHIKIYLYSDAAKTQPISDT
CCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCC
NVKVHISYDMKNVVTVYQDTASLQYQLWGDQWAVGVDELITTIHLPNDNGNEYWLNPTKY
CEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHEEECCCCCCCEEEECCCCC
TKTSSLDGNTITSTSNYIDSGNFYEIEVLMPESDFANSPNAIHIDKAAKKEIEQRYNDYQ
CCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHC
ANEKMWDNIGSLIGILFIISPVIPFFIYRKYGVEPKVNYEGIYERDLPSNDPPAVVNALI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHH
QKRYNIGTPDLKGFEATIMDLINRKIFKIKSNEEKHLIIELDETNYDSLTLDEKDVFDIF
HHHCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCEECCHHHHHHHH
KTIAKDNLLDLSNVKDYLSDEHNAEWFNNRIKSWKNDVAYEHLSKSRLKQFFNNEGNKIA
HHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
TYYSIACIIIGVLFGSLFYLENGLNTTGGTIGLIGSVFLFISGFVIYMLPEDIFGQWTKE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHCCCCCC
GRLYMLKWKNFKKFLSDNSLMKEHPPESIVIWNQYLVYATALGVADKVYESMKLHVGEGN
CCEEEEEEHHHHHHHCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEECCCC
IDDDYLDSYYYYGTGYYMMHNAIDTGIQTANANSDSSGFGGVGGGSGGGGGGAF
CCHHHHCCEEEEECEEEEEEHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]