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The map label for this gene is yigC [C]

Identifier: 148643346

GI number: 148643346

Start: 1289974

End: 1291230

Strand: Reverse

Name: yigC [C]

Synonym: Msm_1286

Alternate gene names: 148643346

Gene position: 1291230-1289974 (Counterclockwise)

Preceding gene: 148643347

Following gene: 148643345

Centisome position: 69.68

GC content: 34.69

Gene sequence:

>1257_bases
ATGGATATCAAAGATGAAAACATTATTGAAATAACAACTGAGCTTTCAAGCGAGTTTGAAGTAGCTAAAGAGCTAAGGAA
ATATCCTAAAGACACTGTTATTATAAAAAATGTAAAAGGATATGATTTGCCGATTATTTCCGGAATCTGCAATACAAGAG
AAAAAATAGCTAAATCTATTAATTGTGAAGTAAGTGAAATTACTCAAAAAATCATAGAAGCCAGTGATAATCCAATTAAA
GTAGATAAATTTACTGATTTTTCAGATTATAACACTACAGAAGCTAATTTAGATAAAATACCTATTTTAACACATTATAA
AAGAGACGGTGGAAAGTATATTACTGCAGGTGTAGTATTTGCACGTGACCCTGAAACAGGTATTCAAAATGCATCAATTC
ACAGAATGCTTGTTTTAGATGATAAAAGACTGGTTATTAGGATTGTTCCAAGAAATCTCTACACATATTTCCAAAAAGCT
CAAAAATTAGGCAAAGATTTGGAAATTGCAATAGCTATTGGAATGGATCCTGCAATTTTACTTGCAAGTACTACTTCAAT
CCCAATTGACTACAATGAAATGGATGTGGCCAATGCATTTAAAAACGGAGAATTGACCCTGATTAAATGCGGAGACCTGG
AAGTTCCTCAAGCAGACATTATTTTGGAAGGTAAAATATCTGTAAGTGAAACTTCAGCTGAAGGTCCGTTTGTAGACTTA
ACCGATACTTATGACATTATTCGTGACCAGCCAATTATCAACTTAAGCAAAATGCATATTAAAAAGGACAATCCCCATTA
TCACGGAATCCTTCCTGCCGGATTTGAACATAAATTATTACAGGGCCTTCCTCAAGAACCTAGAATTTTCAAATCTGTTA
AAAATGCAGTTCCAACTGTTGAAAATGTTGTTTTAACAGAAGGAGGGTGTTGCTGGTTACATGCAGCTATTTCCATTAAC
AAACAAACAGAAGGAGATGGAAAAAATGCAATTATGGCTGCACTGTCTGCACATCCTTCACTTAAACACGCTGTTGTTGT
AGACACTGATGTAGATGTATTTGACCCACAGGATATTGAATATGCAATAGCTACCCGTGTAAAAGGAGACAGAGATTTAA
TGATTGTTCCTAATGTACGTGGATCTTCCCTTGACCCGGTAGCTGAAAGTGACGGTACAACAACAAAAATAGGTTTGGAT
GCCACCAAATCCTTAAAAACCCTAGATAAATTTGAAAGAGTTAGTTTCGGAGAGTAA

Upstream 100 bases:

>100_bases
TGCTGTTTTAAGTGGTGAAATACTTTCTATTAACAATCCTGTTCTTTTAGAGCTTTTAGAAAAATTAAAAAATAAAAAAA
TCAACATATAAGGGATAATT

Downstream 100 bases:

>100_bases
TTATGAATATTAAAAAATATAAGAATTATTTATTCTTATTACCTTTTATATTTTTATTTTTAATTTTATTGAATTGGCAC
CATTCGATTGGATTATCGAT

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, UbiD

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MDIKDENIIEITTELSSEFEVAKELRKYPKDTVIIKNVKGYDLPIISGICNTREKIAKSINCEVSEITQKIIEASDNPIK
VDKFTDFSDYNTTEANLDKIPILTHYKRDGGKYITAGVVFARDPETGIQNASIHRMLVLDDKRLVIRIVPRNLYTYFQKA
QKLGKDLEIAIAIGMDPAILLASTTSIPIDYNEMDVANAFKNGELTLIKCGDLEVPQADIILEGKISVSETSAEGPFVDL
TDTYDIIRDQPIINLSKMHIKKDNPHYHGILPAGFEHKLLQGLPQEPRIFKSVKNAVPTVENVVLTEGGCCWLHAAISIN
KQTEGDGKNAIMAALSAHPSLKHAVVVDTDVDVFDPQDIEYAIATRVKGDRDLMIVPNVRGSSLDPVAESDGTTTKIGLD
ATKSLKTLDKFERVSFGE

Sequences:

>Translated_418_residues
MDIKDENIIEITTELSSEFEVAKELRKYPKDTVIIKNVKGYDLPIISGICNTREKIAKSINCEVSEITQKIIEASDNPIK
VDKFTDFSDYNTTEANLDKIPILTHYKRDGGKYITAGVVFARDPETGIQNASIHRMLVLDDKRLVIRIVPRNLYTYFQKA
QKLGKDLEIAIAIGMDPAILLASTTSIPIDYNEMDVANAFKNGELTLIKCGDLEVPQADIILEGKISVSETSAEGPFVDL
TDTYDIIRDQPIINLSKMHIKKDNPHYHGILPAGFEHKLLQGLPQEPRIFKSVKNAVPTVENVVLTEGGCCWLHAAISIN
KQTEGDGKNAIMAALSAHPSLKHAVVVDTDVDVFDPQDIEYAIATRVKGDRDLMIVPNVRGSSLDPVAESDGTTTKIGLD
ATKSLKTLDKFERVSFGE
>Mature_418_residues
MDIKDENIIEITTELSSEFEVAKELRKYPKDTVIIKNVKGYDLPIISGICNTREKIAKSINCEVSEITQKIIEASDNPIK
VDKFTDFSDYNTTEANLDKIPILTHYKRDGGKYITAGVVFARDPETGIQNASIHRMLVLDDKRLVIRIVPRNLYTYFQKA
QKLGKDLEIAIAIGMDPAILLASTTSIPIDYNEMDVANAFKNGELTLIKCGDLEVPQADIILEGKISVSETSAEGPFVDL
TDTYDIIRDQPIINLSKMHIKKDNPHYHGILPAGFEHKLLQGLPQEPRIFKSVKNAVPTVENVVLTEGGCCWLHAAISIN
KQTEGDGKNAIMAALSAHPSLKHAVVVDTDVDVFDPQDIEYAIATRVKGDRDLMIVPNVRGSSLDPVAESDGTTTKIGLD
ATKSLKTLDKFERVSFGE

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=430, Percent_Identity=26.5116279069767, Blast_Score=146, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6320748, Length=467, Percent_Identity=25.0535331905782, Blast_Score=84, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 46222; Mature: 46222

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKDENIIEITTELSSEFEVAKELRKYPKDTVIIKNVKGYDLPIISGICNTREKIAKSI
CCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC
NCEVSEITQKIIEASDNPIKVDKFTDFSDYNTTEANLDKIPILTHYKRDGGKYITAGVVF
CCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEE
ARDPETGIQNASIHRMLVLDDKRLVIRIVPRNLYTYFQKAQKLGKDLEIAIAIGMDPAIL
EECCCCCCCCCCEEEEEEECCCEEEEEEECHHHHHHHHHHHHCCCCEEEEEEECCCCEEE
LASTTSIPIDYNEMDVANAFKNGELTLIKCGDLEVPQADIILEGKISVSETSAEGPFVDL
EEECCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCEEEECCEEEECCCCCCCEEEC
TDTYDIIRDQPIINLSKMHIKKDNPHYHGILPAGFEHKLLQGLPQEPRIFKSVKNAVPTV
CCCHHHHCCCCCEEEEEEEEECCCCCEEEECCCCCHHHHHHCCCCCCHHHHHHHHHCCCC
ENVVLTEGGCCWLHAAISINKQTEGDGKNAIMAALSAHPSLKHAVVVDTDVDVFDPQDIE
CEEEEECCCEEEEEEEEEECCCCCCCCCHHHHEEHHCCCCCCEEEEEECCCCCCCCCCCE
YAIATRVKGDRDLMIVPNVRGSSLDPVAESDGTTTKIGLDATKSLKTLDKFERVSFGE
EEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDIKDENIIEITTELSSEFEVAKELRKYPKDTVIIKNVKGYDLPIISGICNTREKIAKSI
CCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC
NCEVSEITQKIIEASDNPIKVDKFTDFSDYNTTEANLDKIPILTHYKRDGGKYITAGVVF
CCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEE
ARDPETGIQNASIHRMLVLDDKRLVIRIVPRNLYTYFQKAQKLGKDLEIAIAIGMDPAIL
EECCCCCCCCCCEEEEEEECCCEEEEEEECHHHHHHHHHHHHCCCCEEEEEEECCCCEEE
LASTTSIPIDYNEMDVANAFKNGELTLIKCGDLEVPQADIILEGKISVSETSAEGPFVDL
EEECCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCEEEECCEEEECCCCCCCEEEC
TDTYDIIRDQPIINLSKMHIKKDNPHYHGILPAGFEHKLLQGLPQEPRIFKSVKNAVPTV
CCCHHHHCCCCCEEEEEEEEECCCCCEEEECCCCCHHHHHHCCCCCCHHHHHHHHHCCCC
ENVVLTEGGCCWLHAAISINKQTEGDGKNAIMAALSAHPSLKHAVVVDTDVDVFDPQDIE
CEEEEECCCEEEEEEEEEECCCCCCCCCHHHHEEHHCCCCCCEEEEEECCCCCCCCCCCE
YAIATRVKGDRDLMIVPNVRGSSLDPVAESDGTTTKIGLDATKSLKTLDKFERVSFGE
EEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2993814 [H]