Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

Click here to switch to the map view.

The map label for this gene is 148643325

Identifier: 148643325

GI number: 148643325

Start: 1270570

End: 1271055

Strand: Reverse

Name: 148643325

Synonym: Msm_1265

Alternate gene names: NA

Gene position: 1271055-1270570 (Counterclockwise)

Preceding gene: 148643328

Following gene: 148643324

Centisome position: 68.59

GC content: 26.13

Gene sequence:

>486_bases
ATGACAATTGAACAAGATGTTAAAAACTGGTTAGCTGACGAAGGTGTCTTTAGAGAAAAAGCTGCTGATGAAAATGCAGA
TTTCCATTTTGTTATTGAATTTCCTAAAGATAATGTAATGGATGTTGTAAAACCAAAAGAAAAAGATGTAATTGTTATTG
GTTGTGCAACACAAGTAGCACCAGAACATATTAGTCTAATGCAAAATGCATCTCCTCAGGAAAAAAATAAATTTTTATTT
GATGTAAGTACTAATTTAAACTTATTTTTAGTTGACTATGAATTAAAAGTAGATCAAGATATTTTACAGCAATATGTTGT
TACTGATAATATTTATGAAGATGGTTTAACTAAAGATGCATTATTTAAAACTATTAAACGTGTGTTTAAAGCTAAATTAC
ATTGTATAATGTTATTAAATTACGATTTTGGCAATTTAAACAATAATAATTCAAAACCACACAATGAAAACAGTATGTTT
GTATAA

Upstream 100 bases:

>100_bases
ATATTGAAATTATTTATTAAATCAAAATTATAAAACATTATTTAATATATAATTTTAAAATAAATAAATATTTTATTATA
ATTTTAAACAAGGTGAAAAG

Downstream 100 bases:

>100_bases
TTTTTTTATAAATTTTAGACAGACAGACAGACATGAATTTCAAGTGAAAGCTCTGCGAAGGTTCTGTAGGAATGAAGACA
TGTATTTCATCTGTAAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTIEQDVKNWLADEGVFREKAADENADFHFVIEFPKDNVMDVVKPKEKDVIVIGCATQVAPEHISLMQNASPQEKNKFLF
DVSTNLNLFLVDYELKVDQDILQQYVVTDNIYEDGLTKDALFKTIKRVFKAKLHCIMLLNYDFGNLNNNNSKPHNENSMF
V

Sequences:

>Translated_161_residues
MTIEQDVKNWLADEGVFREKAADENADFHFVIEFPKDNVMDVVKPKEKDVIVIGCATQVAPEHISLMQNASPQEKNKFLF
DVSTNLNLFLVDYELKVDQDILQQYVVTDNIYEDGLTKDALFKTIKRVFKAKLHCIMLLNYDFGNLNNNNSKPHNENSMF
V
>Mature_160_residues
TIEQDVKNWLADEGVFREKAADENADFHFVIEFPKDNVMDVVKPKEKDVIVIGCATQVAPEHISLMQNASPQEKNKFLFD
VSTNLNLFLVDYELKVDQDILQQYVVTDNIYEDGLTKDALFKTIKRVFKAKLHCIMLLNYDFGNLNNNNSKPHNENSMFV

Specific function: Unknown

COG id: COG5440

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18575; Mature: 18444

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIEQDVKNWLADEGVFREKAADENADFHFVIEFPKDNVMDVVKPKEKDVIVIGCATQVA
CCCHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCCCCHHCCCCCCCEEEEECCCCCC
PEHISLMQNASPQEKNKFLFDVSTNLNLFLVDYELKVDQDILQQYVVTDNIYEDGLTKDA
HHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEEEECCHHHHHHHHHCCCHHHCCCCHHH
LFKTIKRVFKAKLHCIMLLNYDFGNLNNNNSKPHNENSMFV
HHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TIEQDVKNWLADEGVFREKAADENADFHFVIEFPKDNVMDVVKPKEKDVIVIGCATQVA
CCHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCCCCHHCCCCCCCEEEEECCCCCC
PEHISLMQNASPQEKNKFLFDVSTNLNLFLVDYELKVDQDILQQYVVTDNIYEDGLTKDA
HHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEEEECCHHHHHHHHHCCCHHHCCCCHHH
LFKTIKRVFKAKLHCIMLLNYDFGNLNNNNSKPHNENSMFV
HHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA