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The map label for this gene is albA1 [H]

Identifier: 148643305

GI number: 148643305

Start: 1249592

End: 1249870

Strand: Reverse

Name: albA1 [H]

Synonym: Msm_1245

Alternate gene names: 148643305

Gene position: 1249870-1249592 (Counterclockwise)

Preceding gene: 148643306

Following gene: 148643302

Centisome position: 67.45

GC content: 33.69

Gene sequence:

>279_bases
ATGGAAGAAAATGTTATCTTTATTGGTAGTAAACCAGTAATGAACTATGTTCTAGCAGTAGTGACACAATTTAACGGTGG
TGCAGACCATGTATCTCTTAAAGCAAGAGGTAAAGCTATTAGTCGTGCCGTAGACACTGCAGAAATTGTTAGAAATGGGT
TTATCCCAAACGCTGATGTTGAGGATATTAGTATTGCTACAGAACAAATAGACACTTACAATGGTGAAAAAACAAATGTT
TCAACTATTGAGATAAAAATTGTAAAAAAGAGTGAATAA

Upstream 100 bases:

>100_bases
TAAGATTTTATTAATGGAAAAAAATTAGCTAAAGCAATATTTATATGTTAAAAAAATTATACACTTAACTGTATAACAGT
CTATATGGAGTCATGATACT

Downstream 100 bases:

>100_bases
CTCTTATTATCCCTTATTTTTTTTAATATAATTTACGGACATGCTTGTCAAATAGATATTTTGATAATTTTATATTTGAA
GTTCCCTTTCCGTGAGCCTC

Product: DNA-binding protein, AlbA

Products: NA

Alternate protein names: Af2 [H]

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MEENVIFIGSKPVMNYVLAVVTQFNGGADHVSLKARGKAISRAVDTAEIVRNGFIPNADVEDISIATEQIDTYNGEKTNV
STIEIKIVKKSE

Sequences:

>Translated_92_residues
MEENVIFIGSKPVMNYVLAVVTQFNGGADHVSLKARGKAISRAVDTAEIVRNGFIPNADVEDISIATEQIDTYNGEKTNV
STIEIKIVKKSE
>Mature_92_residues
MEENVIFIGSKPVMNYVLAVVTQFNGGADHVSLKARGKAISRAVDTAEIVRNGFIPNADVEDISIATEQIDTYNGEKTNV
STIEIKIVKKSE

Specific function: Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May

COG id: COG1581

COG function: function code K; Archaeal DNA-binding protein

Gene ontology:

Cell location: Cytoplasm (Probable). Chromosome (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone-like Alba family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013795
- InterPro:   IPR002775 [H]

Pfam domain/function: PF01918 Alba [H]

EC number: NA

Molecular weight: Translated: 10010; Mature: 10010

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEENVIFIGSKPVMNYVLAVVTQFNGGADHVSLKARGKAISRAVDTAEIVRNGFIPNADV
CCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCC
EDISIATEQIDTYNGEKTNVSTIEIKIVKKSE
CCEEEHHHHHHCCCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MEENVIFIGSKPVMNYVLAVVTQFNGGADHVSLKARGKAISRAVDTAEIVRNGFIPNADV
CCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCC
EDISIATEQIDTYNGEKTNVSTIEIKIVKKSE
CCEEEHHHHHHCCCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]