| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is ilvE [H]
Identifier: 148643262
GI number: 148643262
Start: 1201877
End: 1202800
Strand: Reverse
Name: ilvE [H]
Synonym: Msm_1202
Alternate gene names: 148643262
Gene position: 1202800-1201877 (Counterclockwise)
Preceding gene: 148643265
Following gene: 148643261
Centisome position: 64.91
GC content: 34.85
Gene sequence:
>924_bases ATGGCATGGGACGATTCTGCTAGTAAAATATGGATGGACGGAAACATGGTTGATTGGAAAGATGCAAAAATTCATGCTCT TTCACATGTAGTCCATTATGGTACAAGTGTTTTTGAAGGTATTAGAGCATATGACAATAAAAAAGGCACTTGTATTTTTC GTTTAAATGAACATGTAAAACGTTTATTTAATTCAGCAAAAGTTTATAAAATTGATATTCCTTATACTCAAGAAGAAATT GCACAGGCAATTAGGGATACTGTTAAAATCAATGAGTTAGCTTCCTGTTACATACGTCCTATTGTATTTAGAGGATATGG TCAGTTAGGAGTTAATCCGTTATCCTGTCCTGTTAATACTGTAATTGCTGCTTGGGAATGGGGATCTTATTTAGGTGAGG AAGGAATGGCTAACGGTGTAGATGTTGGAGTTTCATCCTGGAGAAAACCAGCTCCGGATACTTTCCCAACATTAGCTAAA TGTGGTGCTAATTATATGAATTCTCAATTAGCTAAACTGGAAGCTATTGACCATGGTTATGAGGAAGCTATCATGCTTGA TTATGAAGGGCATGTTTCTGAAGGTAGTGGGGAAAACATTTTCATTATTGAAGATGGAGTATTATACACTCCTTCAATGG ATTCTTCCAATCTTAAAGGAATTACAAGGGAATCTATTAAACAATTGGCCAATGATTTAGGCTATGAAGTAGTTGAAGAA AGAATTTCAAGAGAAAGATTATATTTTGCTGATGAAGTATTTTTCAGCGGAACTGCTGCTGAAGTTACTCCTATCCGTTC AATTGATCATAAAATCATTGGTGCAGGTAAAAGAGGTCCAATTTCAGAAGAATTACAAAAAACTTTCTTTGACATTGTTG AAGGCAAAAAAGAAGATAAATTTGGCTGGTTGGATTACGTTTAA
Upstream 100 bases:
>100_bases TTACTTTGTGTATAAAATTCGCATCTGTCTGATAAGTAAGTTATAAATAAAAATAACACTATAATATACACTAATGAATT ATTAATTGAAAGTGATATAA
Downstream 100 bases:
>100_bases ATGGTGTGAGAAATGGATATAATTCAGGCAATTATTATTGGTATTGTTCAGGGATTAACTGAGTTCTTACCTGTAAGTAG TTCAGCTCATTTAATCTTTG
Product: branched-chain-amino-acid aminotransferase, IlvE
Products: NA
Alternate protein names: BCAT; Transaminase B [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MAWDDSASKIWMDGNMVDWKDAKIHALSHVVHYGTSVFEGIRAYDNKKGTCIFRLNEHVKRLFNSAKVYKIDIPYTQEEI AQAIRDTVKINELASCYIRPIVFRGYGQLGVNPLSCPVNTVIAAWEWGSYLGEEGMANGVDVGVSSWRKPAPDTFPTLAK CGANYMNSQLAKLEAIDHGYEEAIMLDYEGHVSEGSGENIFIIEDGVLYTPSMDSSNLKGITRESIKQLANDLGYEVVEE RISRERLYFADEVFFSGTAAEVTPIRSIDHKIIGAGKRGPISEELQKTFFDIVEGKKEDKFGWLDYV
Sequences:
>Translated_307_residues MAWDDSASKIWMDGNMVDWKDAKIHALSHVVHYGTSVFEGIRAYDNKKGTCIFRLNEHVKRLFNSAKVYKIDIPYTQEEI AQAIRDTVKINELASCYIRPIVFRGYGQLGVNPLSCPVNTVIAAWEWGSYLGEEGMANGVDVGVSSWRKPAPDTFPTLAK CGANYMNSQLAKLEAIDHGYEEAIMLDYEGHVSEGSGENIFIIEDGVLYTPSMDSSNLKGITRESIKQLANDLGYEVVEE RISRERLYFADEVFFSGTAAEVTPIRSIDHKIIGAGKRGPISEELQKTFFDIVEGKKEDKFGWLDYV >Mature_306_residues AWDDSASKIWMDGNMVDWKDAKIHALSHVVHYGTSVFEGIRAYDNKKGTCIFRLNEHVKRLFNSAKVYKIDIPYTQEEIA QAIRDTVKINELASCYIRPIVFRGYGQLGVNPLSCPVNTVIAAWEWGSYLGEEGMANGVDVGVSSWRKPAPDTFPTLAKC GANYMNSQLAKLEAIDHGYEEAIMLDYEGHVSEGSGENIFIIEDGVLYTPSMDSSNLKGITRESIKQLANDLGYEVVEER ISRERLYFADEVFFSGTAAEVTPIRSIDHKIIGAGKRGPISEELQKTFFDIVEGKKEDKFGWLDYV
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010904, Length=321, Percent_Identity=28.9719626168224, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI38176287, Length=321, Percent_Identity=28.9719626168224, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI296010906, Length=321, Percent_Identity=28.9719626168224, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI296010902, Length=278, Percent_Identity=29.8561151079137, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI296010900, Length=278, Percent_Identity=29.8561151079137, Blast_Score=72, Evalue=5e-13, Organism=Escherichia coli, GI48994963, Length=302, Percent_Identity=51.9867549668874, Blast_Score=339, Evalue=2e-94, Organism=Saccharomyces cerevisiae, GI6322608, Length=339, Percent_Identity=25.9587020648968, Blast_Score=78, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6322002, Length=294, Percent_Identity=27.2108843537415, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 34459; Mature: 34328
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWDDSASKIWMDGNMVDWKDAKIHALSHVVHYGTSVFEGIRAYDNKKGTCIFRLNEHVK CCCCCCCCEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHH RLFNSAKVYKIDIPYTQEEIAQAIRDTVKINELASCYIRPIVFRGYGQLGVNPLSCPVNT HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHH VIAAWEWGSYLGEEGMANGVDVGVSSWRKPAPDTFPTLAKCGANYMNSQLAKLEAIDHGY HEEHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCC EEAIMLDYEGHVSEGSGENIFIIEDGVLYTPSMDSSNLKGITRESIKQLANDLGYEVVEE CCEEEEEECCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHH RISRERLYFADEVFFSGTAAEVTPIRSIDHKIIGAGKRGPISEELQKTFFDIVEGKKEDK HHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC FGWLDYV CCCCCCC >Mature Secondary Structure AWDDSASKIWMDGNMVDWKDAKIHALSHVVHYGTSVFEGIRAYDNKKGTCIFRLNEHVK CCCCCCCEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHH RLFNSAKVYKIDIPYTQEEIAQAIRDTVKINELASCYIRPIVFRGYGQLGVNPLSCPVNT HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHH VIAAWEWGSYLGEEGMANGVDVGVSSWRKPAPDTFPTLAKCGANYMNSQLAKLEAIDHGY HEEHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCC EEAIMLDYEGHVSEGSGENIFIIEDGVLYTPSMDSSNLKGITRESIKQLANDLGYEVVEE CCEEEEEECCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHH RISRERLYFADEVFFSGTAAEVTPIRSIDHKIIGAGKRGPISEELQKTFFDIVEGKKEDK HHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC FGWLDYV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]