| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is murC [H]
Identifier: 148643250
GI number: 148643250
Start: 1187316
End: 1188851
Strand: Reverse
Name: murC [H]
Synonym: Msm_1190
Alternate gene names: 148643250
Gene position: 1188851-1187316 (Counterclockwise)
Preceding gene: 148643251
Following gene: 148643249
Centisome position: 64.15
GC content: 32.94
Gene sequence:
>1536_bases ATGAATGAGTCTGATTTTCCGGAAGATACAACATTTGGAGTAATTGGAATTTGTGGAGCTAATTGTAATCTGGTAGCTAG AATTCTTAAAGACCGTGGATTTGATGTTATTGGAACAGATATGTCCTCTGGTGATGATTGCAGGTTTAAAAAATCTTTGG AAGGATATGACATTGAAGTATTTTATGAATCTCATCCTGAAGAGTTTTTTGAAAAAGCAGATTATATAATTCCTCCAATA AGTTTACCTAAAACAGCTGAAGTATTTGATATTATTCAGGAAAAAAACATTCCAGTTCTGGAAGTTAGTGATATTATTGA TATTTTTAAAGTAAATAAACCGGTATTTGGAATAACCGGAACTAATGGTAAGACAACTACCACAACCCTTCTGAAAAAAA TAGCTTATGATAATAATATTGCACCTGTTGAACATAATTTAGAAAAAATGCAGGGGAATGCTGAATATATTCCAATTTTA CAGTCTCGTTTAAATGGGGATGTTGGAATATTGGAAGTGGGCACATTTGGAGTTCCGGGCACTATTGAAAGAATAGTTGG AAATTCTGAATTAACTTCCGGATTAATAACAAACATAACTCCTGATCATTTAAATGATTTGGGAGGATTTATGGAGTATG CGCATGTTAAAGCAGAATTTATAAAAGGATTGGCTGGAAAACAACTTATTGTAAACGGTCAGGATCCAACAATCATGGGG CTTTTAAGGGAATTGAACTTTGCAGGTGAAATAATTACTTTTGGGGTAGATGAAATGCCTGTAGGTGTAGCTTCTAAAGA ATGTGTTTGCGGTAAAACCATTGATGTTAAAGAGATTATTTCAGGTTCCGGCTATTATTTATGTGAATGTGGTCTGACAA CTCCTCAGCTAGATTATATTGCAACCAACATTAATTTAAAAAACAGAACTTTTGAATTACATACTCCGGAAGAAAAATTA GAAGTTAAAATGCTTCTTGATGGAATTCATAATGTCTATAATGTTGTTGGAGTAATTGTTGCAGCTCATGAATTTCTAAA ATTACCTTATGATAAAATATTGGAGTCAATAGCTACTTTTGGTGGGGTTTCTGGAAGGATGGAGAAAGTAGCCACAATTG GCGAAAAAGATGTTGTTGTAGATTTTGCACATAATCCGGCAGGTGTTGAAACGGTTTTACGTGAATTTAAAAAATTATAT GGTGATATCACTACAGTTATTACAATTTCCTCTGAATCCGGTGCTGAAGGAGATTTGGAAATATTTAATAAAGTTTTAGA GTTTTCTAAATACATTGTTCCGGCATCCAGTGCTTCTCAAAAAATAGCTAGTGATAAAATAAGTGAATGTCCTGAACTTA AGGAAAAAATTATATTGAATCATGGTGTTGATAACTTTGTCAAAAAAGGCACACTTGGCGCAACCTTTGATGAAGTTCAA GAAGGAATTAATCAGGCATTAAATTTAGATTGTAATAAGATAGTAGCTATTGGCGAAGCGGCTACAAAATTTAAAAAATG TGTCAATAATTTGTAA
Upstream 100 bases:
>100_bases CCTGGAGACATTATTCTGCATATGGGGCCACTTATAGCTTATGATAGAATTACCACTGTTGAAAAAATCATGAAAGGACT TGAAGAGGGAAGTAAAAAAT
Downstream 100 bases:
>100_bases ATTAAATATTTATGTTTAATTATTCTTTCTAAATTTTAACTATATTTAATACTCTAAATATTTATTTTGTTTATGTATTA TTATTATTTTTATTATTTTT
Product: UDP-N-acetylmuramate-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase [H]
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MNESDFPEDTTFGVIGICGANCNLVARILKDRGFDVIGTDMSSGDDCRFKKSLEGYDIEVFYESHPEEFFEKADYIIPPI SLPKTAEVFDIIQEKNIPVLEVSDIIDIFKVNKPVFGITGTNGKTTTTTLLKKIAYDNNIAPVEHNLEKMQGNAEYIPIL QSRLNGDVGILEVGTFGVPGTIERIVGNSELTSGLITNITPDHLNDLGGFMEYAHVKAEFIKGLAGKQLIVNGQDPTIMG LLRELNFAGEIITFGVDEMPVGVASKECVCGKTIDVKEIISGSGYYLCECGLTTPQLDYIATNINLKNRTFELHTPEEKL EVKMLLDGIHNVYNVVGVIVAAHEFLKLPYDKILESIATFGGVSGRMEKVATIGEKDVVVDFAHNPAGVETVLREFKKLY GDITTVITISSESGAEGDLEIFNKVLEFSKYIVPASSASQKIASDKISECPELKEKIILNHGVDNFVKKGTLGATFDEVQ EGINQALNLDCNKIVAIGEAATKFKKCVNNL
Sequences:
>Translated_511_residues MNESDFPEDTTFGVIGICGANCNLVARILKDRGFDVIGTDMSSGDDCRFKKSLEGYDIEVFYESHPEEFFEKADYIIPPI SLPKTAEVFDIIQEKNIPVLEVSDIIDIFKVNKPVFGITGTNGKTTTTTLLKKIAYDNNIAPVEHNLEKMQGNAEYIPIL QSRLNGDVGILEVGTFGVPGTIERIVGNSELTSGLITNITPDHLNDLGGFMEYAHVKAEFIKGLAGKQLIVNGQDPTIMG LLRELNFAGEIITFGVDEMPVGVASKECVCGKTIDVKEIISGSGYYLCECGLTTPQLDYIATNINLKNRTFELHTPEEKL EVKMLLDGIHNVYNVVGVIVAAHEFLKLPYDKILESIATFGGVSGRMEKVATIGEKDVVVDFAHNPAGVETVLREFKKLY GDITTVITISSESGAEGDLEIFNKVLEFSKYIVPASSASQKIASDKISECPELKEKIILNHGVDNFVKKGTLGATFDEVQ EGINQALNLDCNKIVAIGEAATKFKKCVNNL >Mature_511_residues MNESDFPEDTTFGVIGICGANCNLVARILKDRGFDVIGTDMSSGDDCRFKKSLEGYDIEVFYESHPEEFFEKADYIIPPI SLPKTAEVFDIIQEKNIPVLEVSDIIDIFKVNKPVFGITGTNGKTTTTTLLKKIAYDNNIAPVEHNLEKMQGNAEYIPIL QSRLNGDVGILEVGTFGVPGTIERIVGNSELTSGLITNITPDHLNDLGGFMEYAHVKAEFIKGLAGKQLIVNGQDPTIMG LLRELNFAGEIITFGVDEMPVGVASKECVCGKTIDVKEIISGSGYYLCECGLTTPQLDYIATNINLKNRTFELHTPEEKL EVKMLLDGIHNVYNVVGVIVAAHEFLKLPYDKILESIATFGGVSGRMEKVATIGEKDVVVDFAHNPAGVETVLREFKKLY GDITTVITISSESGAEGDLEIFNKVLEFSKYIVPASSASQKIASDKISECPELKEKIILNHGVDNFVKKGTLGATFDEVQ EGINQALNLDCNKIVAIGEAATKFKKCVNNL
Specific function: Cell wall formation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.8 [H]
Molecular weight: Translated: 55839; Mature: 55839
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNESDFPEDTTFGVIGICGANCNLVARILKDRGFDVIGTDMSSGDDCRFKKSLEGYDIEV CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHCCCCCEEEE FYESHPEEFFEKADYIIPPISLPKTAEVFDIIQEKNIPVLEVSDIIDIFKVNKPVFGITG EECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCEEEEEC TNGKTTTTTLLKKIAYDNNIAPVEHNLEKMQGNAEYIPILQSRLNGDVGILEVGTFGVPG CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCCH TIERIVGNSELTSGLITNITPDHLNDLGGFMEYAHVKAEFIKGLAGKQLIVNGQDPTIMG HHHHHHCCCHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHH LLRELNFAGEIITFGVDEMPVGVASKECVCGKTIDVKEIISGSGYYLCECGLTTPQLDYI HHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCEE ATNINLKNRTFELHTPEEKLEVKMLLDGIHNVYNVVGVIVAAHEFLKLPYDKILESIATF EEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GGVSGRMEKVATIGEKDVVVDFAHNPAGVETVLREFKKLYGDITTVITISSESGAEGDLE CCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHH IFNKVLEFSKYIVPASSASQKIASDKISECPELKEKIILNHGVDNFVKKGTLGATFDEVQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCCHHHHH EGINQALNLDCNKIVAIGEAATKFKKCVNNL HHHHHHHCCCCHHEEEECHHHHHHHHHHHCC >Mature Secondary Structure MNESDFPEDTTFGVIGICGANCNLVARILKDRGFDVIGTDMSSGDDCRFKKSLEGYDIEV CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHCCCCCEEEE FYESHPEEFFEKADYIIPPISLPKTAEVFDIIQEKNIPVLEVSDIIDIFKVNKPVFGITG EECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCEEEEEC TNGKTTTTTLLKKIAYDNNIAPVEHNLEKMQGNAEYIPILQSRLNGDVGILEVGTFGVPG CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCCH TIERIVGNSELTSGLITNITPDHLNDLGGFMEYAHVKAEFIKGLAGKQLIVNGQDPTIMG HHHHHHCCCHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHH LLRELNFAGEIITFGVDEMPVGVASKECVCGKTIDVKEIISGSGYYLCECGLTTPQLDYI HHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCEE ATNINLKNRTFELHTPEEKLEVKMLLDGIHNVYNVVGVIVAAHEFLKLPYDKILESIATF EEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GGVSGRMEKVATIGEKDVVVDFAHNPAGVETVLREFKKLYGDITTVITISSESGAEGDLE CCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHH IFNKVLEFSKYIVPASSASQKIASDKISECPELKEKIILNHGVDNFVKKGTLGATFDEVQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCCHHHHH EGINQALNLDCNKIVAIGEAATKFKKCVNNL HHHHHHHCCCCHHEEEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA