Click here to switch to the map view.

The map label for this gene is 148643249

Identifier: 148643249

GI number: 148643249

Start: 1185584

End: 1186789

Strand: Reverse

Name: 148643249

Synonym: Msm_1189

Alternate gene names: NA

Gene position: 1186789-1185584 (Counterclockwise)

Preceding gene: 148643250

Following gene: 148643248

Centisome position: 64.04

GC content: 26.37

Gene sequence:

>1206_bases
ATGACCAAACAAAACAAATCTGCCCTCAATAGTAATATAGACTTCATACAACTTAAACTTTATGATTTTTTTGATGAAAA
AATTGATCAAGAAAAAATTATTTCAAAAAGATTGAATAAAACACCTAATTTTGAAAATACTAATCATAAACTATTTTTAG
ATGAAAATAATACTTTTAAATATGATAATCCCATTTGTCCAGTTTGTGGAAGCCACAAAATAATCAAAAAAGGCACAATA
AAGAAAAACAAACAAAATACTAATGGAAAAACAACAGAATTCAAAGAACAGCAATATCAATGCAAAAAATGTGGAAAAAA
ATTCGGAATATACAATAATCCATTAATTGGTGAAAATAAACAATTTTTACAAGAAATAATGGATAAAATTCCAGGAATAA
TGAAAATAGGGTACCAATCACTTCGTAAAATAAGTAAATACTTTGAAATATTCCTTGGAATCAGAATATCTCATCAAACA
ATCAAGAACTGGTCTGACAAAAATCACGAAGAAAGCATCAGCAATGAAAAATTTGAATATTCTGGCTATTATTTATATGA
TGAGCAATTTTTAAGACTTAATGGAACTAGACACTACAGATTAACTTTATTTGATGCAATACTCAATATTCCAGTCACAG
AACGAATAGTACGTCGCAGAATACCAAAAAACACGAAAAAATTTATCTTAGAATCAACAGAAAATAAACCATTCATTTGC
CTAACAACCGATTTATTCCCAATGTATCGTAATGTAGCAGATGAAATAGAAGTAAAACATCAATTGTGCATATTTCATCT
GTTTCAAACAATAAACCATAAATTAAAAGTATATTGTAGAAGAAACAAGATTAATGGAAAACAAAGAGACCATATTTACG
AAAATGCACAAGAATTAAAAAACTGTTTCAGACAAAACTCAAAAAAAGAAGCAATAGAACAATTTAAACAATATTTACAA
AAATATACGGCCATACCAGTTGTTTTAAAAGATTTCATAAGAAAACATATCATAAATCACTTCCACAGATACGTAGAATA
TCTTGATGATGAAAATATAGAAAAAACATCAAATAAAGTCGAAAATTACTACAGACAAACCAATCCTGAAAAAATAAAGA
AAATATACAAAACCAAAAATGGAATCCTGACATTTTTAGACTATCAAATGCAAAATTGGACTGAAAAACACATTAAAATC
AAATAA

Upstream 100 bases:

>100_bases
TTTCATTTTGATGAAATTTCATTCTAATTTTTCTTTAATTTTAATATAAATGATTTAAAAATAGTAAAATACTTTAATAA
GTGAGGACAAATAATATTTT

Downstream 100 bases:

>100_bases
GCCTATAAAATTTTACAGACTCTTTAAATTATAATTTTAAAAAAGGAGAATAATATCATGAGTCTAAAAAAGAATATTGG
TGTGTTAGTTCTTTTATTAG

Product: putative transposase

Products: NA

Alternate protein names: ORFIS

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MTKQNKSALNSNIDFIQLKLYDFFDEKIDQEKIISKRLNKTPNFENTNHKLFLDENNTFKYDNPICPVCGSHKIIKKGTI
KKNKQNTNGKTTEFKEQQYQCKKCGKKFGIYNNPLIGENKQFLQEIMDKIPGIMKIGYQSLRKISKYFEIFLGIRISHQT
IKNWSDKNHEESISNEKFEYSGYYLYDEQFLRLNGTRHYRLTLFDAILNIPVTERIVRRRIPKNTKKFILESTENKPFIC
LTTDLFPMYRNVADEIEVKHQLCIFHLFQTINHKLKVYCRRNKINGKQRDHIYENAQELKNCFRQNSKKEAIEQFKQYLQ
KYTAIPVVLKDFIRKHIINHFHRYVEYLDDENIEKTSNKVENYYRQTNPEKIKKIYKTKNGILTFLDYQMQNWTEKHIKI
K

Sequences:

>Translated_401_residues
MTKQNKSALNSNIDFIQLKLYDFFDEKIDQEKIISKRLNKTPNFENTNHKLFLDENNTFKYDNPICPVCGSHKIIKKGTI
KKNKQNTNGKTTEFKEQQYQCKKCGKKFGIYNNPLIGENKQFLQEIMDKIPGIMKIGYQSLRKISKYFEIFLGIRISHQT
IKNWSDKNHEESISNEKFEYSGYYLYDEQFLRLNGTRHYRLTLFDAILNIPVTERIVRRRIPKNTKKFILESTENKPFIC
LTTDLFPMYRNVADEIEVKHQLCIFHLFQTINHKLKVYCRRNKINGKQRDHIYENAQELKNCFRQNSKKEAIEQFKQYLQ
KYTAIPVVLKDFIRKHIINHFHRYVEYLDDENIEKTSNKVENYYRQTNPEKIKKIYKTKNGILTFLDYQMQNWTEKHIKI
K
>Mature_400_residues
TKQNKSALNSNIDFIQLKLYDFFDEKIDQEKIISKRLNKTPNFENTNHKLFLDENNTFKYDNPICPVCGSHKIIKKGTIK
KNKQNTNGKTTEFKEQQYQCKKCGKKFGIYNNPLIGENKQFLQEIMDKIPGIMKIGYQSLRKISKYFEIFLGIRISHQTI
KNWSDKNHEESISNEKFEYSGYYLYDEQFLRLNGTRHYRLTLFDAILNIPVTERIVRRRIPKNTKKFILESTENKPFICL
TTDLFPMYRNVADEIEVKHQLCIFHLFQTINHKLKVYCRRNKINGKQRDHIYENAQELKNCFRQNSKKEAIEQFKQYLQK
YTAIPVVLKDFIRKHIINHFHRYVEYLDDENIEKTSNKVENYYRQTNPEKIKKIYKTKNGILTFLDYQMQNWTEKHIKIK

Specific function: This polypeptide is involved in transposition, and should therefore bind to nucleic acids

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YI48_METSM (P22344)

Other databases:

- EMBL:   X02587
- PIR:   S28653

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48314; Mature: 48183

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQNKSALNSNIDFIQLKLYDFFDEKIDQEKIISKRLNKTPNFENTNHKLFLDENNTFK
CCCCCCHHHCCCCCEEEEHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCEE
YDNPICPVCGSHKIIKKGTIKKNKQNTNGKTTEFKEQQYQCKKCGKKFGIYNNPLIGENK
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCH
QFLQEIMDKIPGIMKIGYQSLRKISKYFEIFLGIRISHQTIKNWSDKNHEESISNEKFEY
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHCCCCCCHHHHHCCCCEEE
SGYYLYDEQFLRLNGTRHYRLTLFDAILNIPVTERIVRRRIPKNTKKFILESTENKPFIC
CCEEEECCEEEEECCCCEEEHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCCCCEEE
LTTDLFPMYRNVADEIEVKHQLCIFHLFQTINHKLKVYCRRNKINGKQRDHIYENAQELK
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCHHHHHHHHHHHHH
NCFRQNSKKEAIEQFKQYLQKYTAIPVVLKDFIRKHIINHFHRYVEYLDDENIEKTSNKV
HHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ENYYRQTNPEKIKKIYKTKNGILTFLDYQMQNWTEKHIKIK
HHHHHHCCHHHHHHHHHCCCCEEEEEHHHHHCCHHHCCCCC
>Mature Secondary Structure 
TKQNKSALNSNIDFIQLKLYDFFDEKIDQEKIISKRLNKTPNFENTNHKLFLDENNTFK
CCCCCHHHCCCCCEEEEHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCEE
YDNPICPVCGSHKIIKKGTIKKNKQNTNGKTTEFKEQQYQCKKCGKKFGIYNNPLIGENK
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCH
QFLQEIMDKIPGIMKIGYQSLRKISKYFEIFLGIRISHQTIKNWSDKNHEESISNEKFEY
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHCCCCCCHHHHHCCCCEEE
SGYYLYDEQFLRLNGTRHYRLTLFDAILNIPVTERIVRRRIPKNTKKFILESTENKPFIC
CCEEEECCEEEEECCCCEEEHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCCCCEEE
LTTDLFPMYRNVADEIEVKHQLCIFHLFQTINHKLKVYCRRNKINGKQRDHIYENAQELK
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCHHHHHHHHHHHHH
NCFRQNSKKEAIEQFKQYLQKYTAIPVVLKDFIRKHIINHFHRYVEYLDDENIEKTSNKV
HHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ENYYRQTNPEKIKKIYKTKNGILTFLDYQMQNWTEKHIKIK
HHHHHHCCHHHHHHHHHCCCCEEEEEHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2993814