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The map label for this gene is 148643220

Identifier: 148643220

GI number: 148643220

Start: 1138845

End: 1139912

Strand: Reverse

Name: 148643220

Synonym: Msm_1160

Alternate gene names: NA

Gene position: 1139912-1138845 (Counterclockwise)

Preceding gene: 148643224

Following gene: 148643219

Centisome position: 61.51

GC content: 34.08

Gene sequence:

>1068_bases
ATGCATCCAAGACCAAGTCCCATAGCTGCATCTCTTTATACTTTAAGAGACATGAATGTTGATGTTATTATAATGCATGG
ACCTCATGGTTGTTGTTTTAGAACTGGCAGGCTTTTAGAAAGTGACGGTGTACGTGTTTTAACTACGGCAATGGCTGAAA
ATGATTTTATTTTAGGAGCTAGTGAAAAACTAGAAAATACATTAAAAGAAGCTTATGATATGTTTAAACCGGAGTTTATA
GGTGTTGTAGGTACTTGTGCTAGTATGATTATTGGTGAAGACTTAAAAGAAGCAATAGCTAATGCTAATTTAGATTGTAC
AGTTATTCCTGTTGAATCTCACGGGGGATTTGGTGAAGGAGATAATACTGAAGGAGCAATAATGGTTTTAGATTCTGCTG
TTGAATATGGTATAATTCCTCGTGAAGAGGCAGACCGTCAAATTGAAATGCTTAAAAAAGCTACTGAAATAGAAAAAACC
AGGGGAATGGCTCAGGGAAAATATATTCAACCTAATTTTGGTGATAATAAGGAAGAAGTGGCTAAAAAAATCATAAAGGC
ACTAAGAGACAATAAAAAAGTTGCTTTTGTATTGAATGCTAAAAAAGAAACTTCTTATTTATTTGCAGATATTTTAAACT
TTGATTATCGTGAAATCAATCCTGAAAATAAACCAATAATTGTAGCTAATTTAGATGAAAATATTGGTCTTTCAAGAATT
AGGAATCATGCAGTTAATATTAAACAGGGACTGAAAACGGATATTGATTATATTACTGGAGGATTGGACGAATATCCTGT
AACCGGAAAAGTTGCTGCAGACTACTTAAAGGAAAACCCTGTTGATTTGTATGTTGTATGCGGTGTTCCTCATGCATTTC
CTGTTGAAGAAATTGAAGGGGAATCAATAGCTGTAACTGATGGTCCTCGTTTAGTTGAACCATTAAGAGATTTGGGATAT
GATAATGTAGTTGCAGAACTTGATGCTCACTCAAAAACTTTAGGAACTGATAAAATTGTTTTTTCTGACTTTGGAGGAAT
GATTAGGTCAGCTATTGACTGGAAGTAG

Upstream 100 bases:

>100_bases
GTATACATTAGATATATGTTATTTATACTATTAAAACTTAATTTTATAAATTAAGAAAATTTAATATTATATATAAAAAA
TTTAGTGAATAGGTGAAAAA

Downstream 100 bases:

>100_bases
AATTATGATAACAATTATTGATTATAAAAGCGGAAATTTAAAAAGCATTTCCAATGGATTTAAAAAAATCGGCTGTGATG
TTGAAATTACAAGCAGCATT

Product: nitrogenase molybdenum-iron protein, NifD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MHPRPSPIAASLYTLRDMNVDVIIMHGPHGCCFRTGRLLESDGVRVLTTAMAENDFILGASEKLENTLKEAYDMFKPEFI
GVVGTCASMIIGEDLKEAIANANLDCTVIPVESHGGFGEGDNTEGAIMVLDSAVEYGIIPREEADRQIEMLKKATEIEKT
RGMAQGKYIQPNFGDNKEEVAKKIIKALRDNKKVAFVLNAKKETSYLFADILNFDYREINPENKPIIVANLDENIGLSRI
RNHAVNIKQGLKTDIDYITGGLDEYPVTGKVAADYLKENPVDLYVVCGVPHAFPVEEIEGESIAVTDGPRLVEPLRDLGY
DNVVAELDAHSKTLGTDKIVFSDFGGMIRSAIDWK

Sequences:

>Translated_355_residues
MHPRPSPIAASLYTLRDMNVDVIIMHGPHGCCFRTGRLLESDGVRVLTTAMAENDFILGASEKLENTLKEAYDMFKPEFI
GVVGTCASMIIGEDLKEAIANANLDCTVIPVESHGGFGEGDNTEGAIMVLDSAVEYGIIPREEADRQIEMLKKATEIEKT
RGMAQGKYIQPNFGDNKEEVAKKIIKALRDNKKVAFVLNAKKETSYLFADILNFDYREINPENKPIIVANLDENIGLSRI
RNHAVNIKQGLKTDIDYITGGLDEYPVTGKVAADYLKENPVDLYVVCGVPHAFPVEEIEGESIAVTDGPRLVEPLRDLGY
DNVVAELDAHSKTLGTDKIVFSDFGGMIRSAIDWK
>Mature_355_residues
MHPRPSPIAASLYTLRDMNVDVIIMHGPHGCCFRTGRLLESDGVRVLTTAMAENDFILGASEKLENTLKEAYDMFKPEFI
GVVGTCASMIIGEDLKEAIANANLDCTVIPVESHGGFGEGDNTEGAIMVLDSAVEYGIIPREEADRQIEMLKKATEIEKT
RGMAQGKYIQPNFGDNKEEVAKKIIKALRDNKKVAFVLNAKKETSYLFADILNFDYREINPENKPIIVANLDENIGLSRI
RNHAVNIKQGLKTDIDYITGGLDEYPVTGKVAADYLKENPVDLYVVCGVPHAFPVEEIEGESIAVTDGPRLVEPLRDLGY
DNVVAELDAHSKTLGTDKIVFSDFGGMIRSAIDWK

Specific function: Unknown

COG id: COG2710

COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1423 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017675
- InterPro:   IPR000510 [H]

Pfam domain/function: PF00148 Oxidored_nitro [H]

EC number: NA

Molecular weight: Translated: 39123; Mature: 39123

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPRPSPIAASLYTLRDMNVDVIIMHGPHGCCFRTGRLLESDGVRVLTTAMAENDFILGA
CCCCCCCHHHHHEEEECCCEEEEEEECCCCCEECCCCEECCCCCEEEEEECCCCCEEECC
SEKLENTLKEAYDMFKPEFIGVVGTCASMIIGEDLKEAIANANLDCTVIPVESHGGFGEG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
DNTEGAIMVLDSAVEYGIIPREEADRQIEMLKKATEIEKTRGMAQGKYIQPNFGDNKEEV
CCCCCEEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHH
AKKIIKALRDNKKVAFVLNAKKETSYLFADILNFDYREINPENKPIIVANLDENIGLSRI
HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCHHCCCCCCCCEEEEECCCCCCHHHH
RNHAVNIKQGLKTDIDYITGGLDEYPVTGKVAADYLKENPVDLYVVCGVPHAFPVEEIEG
HHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCC
ESIAVTDGPRLVEPLRDLGYDNVVAELDAHSKTLGTDKIVFSDFGGMIRSAIDWK
CEEEEECCCHHHHHHHHCCCCCEEHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHPRPSPIAASLYTLRDMNVDVIIMHGPHGCCFRTGRLLESDGVRVLTTAMAENDFILGA
CCCCCCCHHHHHEEEECCCEEEEEEECCCCCEECCCCEECCCCCEEEEEECCCCCEEECC
SEKLENTLKEAYDMFKPEFIGVVGTCASMIIGEDLKEAIANANLDCTVIPVESHGGFGEG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
DNTEGAIMVLDSAVEYGIIPREEADRQIEMLKKATEIEKTRGMAQGKYIQPNFGDNKEEV
CCCCCEEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHH
AKKIIKALRDNKKVAFVLNAKKETSYLFADILNFDYREINPENKPIIVANLDENIGLSRI
HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCHHCCCCCCCCEEEEECCCCCCHHHH
RNHAVNIKQGLKTDIDYITGGLDEYPVTGKVAADYLKENPVDLYVVCGVPHAFPVEEIEG
HHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCC
ESIAVTDGPRLVEPLRDLGYDNVVAELDAHSKTLGTDKIVFSDFGGMIRSAIDWK
CEEEEECCCHHHHHHHHCCCCCEEHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]