Click here to switch to the map view.

The map label for this gene is 148643215

Identifier: 148643215

GI number: 148643215

Start: 1134370

End: 1134759

Strand: Reverse

Name: 148643215

Synonym: Msm_1155

Alternate gene names: NA

Gene position: 1134759-1134370 (Counterclockwise)

Preceding gene: 148643216

Following gene: 148643214

Centisome position: 61.23

GC content: 33.08

Gene sequence:

>390_bases
ATGATTGATTGTAGAAATATTGCTAAGGGAAAAGATAGTGGAGAATTAATAGTAAGCAGTGAGCCAATTAGTTTTTTGGG
AGGTGTGGATCCTAAAACAGGCATTGTAATTGATCCAAATCATGAACTTAAAGGTCAATCCATTAAGGACAAAGTTTTAT
TCATTCCTGGTGGAAAAGGTTCAACTGTTGGTTCTTATGTTATATTTCAAATGAAAAAGAATAATACTGCACCTAAAGCT
ATTATATGTTTAAATGCAGAACCGATTATTGCTACTGGTGCTATAATGTCTGATATACCTATGGTCGACTCTCCGGAAGA
TACTGATGAACTGAAAAATGGTGTTTTAGTTGAAGTTGATGGGGATAATGGTAAAATAGCTATTTTATAA

Upstream 100 bases:

>100_bases
GAAATTTTCATATAATTCATTTTATTTTAATATGCTCTTTAATTTTAAGTAATAGTTTTTATAAAATTATATCAAAGAAT
TATTATTTAAGTTGATTTTT

Downstream 100 bases:

>100_bases
ATAATGTGGTTATTATGGAAACTTTAATTAAAAATGTAAACATTTTAAATCCGAATGAAGAAATTCAAACTTCATGCAAT
GTTTTAATTGAAGATAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MIDCRNIAKGKDSGELIVSSEPISFLGGVDPKTGIVIDPNHELKGQSIKDKVLFIPGGKGSTVGSYVIFQMKKNNTAPKA
IICLNAEPIIATGAIMSDIPMVDSPEDTDELKNGVLVEVDGDNGKIAIL

Sequences:

>Translated_129_residues
MIDCRNIAKGKDSGELIVSSEPISFLGGVDPKTGIVIDPNHELKGQSIKDKVLFIPGGKGSTVGSYVIFQMKKNNTAPKA
IICLNAEPIIATGAIMSDIPMVDSPEDTDELKNGVLVEVDGDNGKIAIL
>Mature_129_residues
MIDCRNIAKGKDSGELIVSSEPISFLGGVDPKTGIVIDPNHELKGQSIKDKVLFIPGGKGSTVGSYVIFQMKKNNTAPKA
IICLNAEPIIATGAIMSDIPMVDSPEDTDELKNGVLVEVDGDNGKIAIL

Specific function: Unknown

COG id: COG1786

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0107 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015928
- InterPro:   IPR002840
- InterPro:   IPR008279
- InterPro:   IPR012016
- InterPro:   IPR020794 [H]

Pfam domain/function: PF01989 DUF126 [H]

EC number: NA

Molecular weight: Translated: 13593; Mature: 13593

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDCRNIAKGKDSGELIVSSEPISFLGGVDPKTGIVIDPNHELKGQSIKDKVLFIPGGKG
CCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCC
STVGSYVIFQMKKNNTAPKAIICLNAEPIIATGAIMSDIPMVDSPEDTDELKNGVLVEVD
CCCEEEEEEEEECCCCCCEEEEEECCCCEEEECCCHHCCCCCCCCCCHHHHCCCEEEEEE
GDNGKIAIL
CCCCEEEEC
>Mature Secondary Structure
MIDCRNIAKGKDSGELIVSSEPISFLGGVDPKTGIVIDPNHELKGQSIKDKVLFIPGGKG
CCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCC
STVGSYVIFQMKKNNTAPKAIICLNAEPIIATGAIMSDIPMVDSPEDTDELKNGVLVEVD
CCCEEEEEEEEECCCCCCEEEEEECCCCEEEECCCHHCCCCCCCCCCHHHHCCCEEEEEE
GDNGKIAIL
CCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]