| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643198
Identifier: 148643198
GI number: 148643198
Start: 1115343
End: 1116074
Strand: Reverse
Name: 148643198
Synonym: Msm_1138
Alternate gene names: NA
Gene position: 1116074-1115343 (Counterclockwise)
Preceding gene: 148643199
Following gene: 148643197
Centisome position: 60.23
GC content: 30.87
Gene sequence:
>732_bases ATGAGTTTTGAATTGAACATTGTTGATATGTATTCCGATATTTTAAATATCTATGGGGACATTGGTAATTTAAAATGCAT TAAAAAAAGATGTGAATGGAGAGGAATCAAGGTTAATCAAAAAAGTTACTCTCTAAATCATGATATGGATTTTGATTATG AGGATATTGACTTAATTTTAATTGGAGGAGGTTCTGACAGAACTCAAAGTATTGTTTCCAATGACCTTTTAAAACAAAGA AATGACCTGGAAAATTATGTGGAAAATGACGGAGTCATATTAACTGTCTGTGGCAGCTATCAGATGTTTGGGCATGAATA TTATGATGTTAATGGGGATAATGTCTCTTGTCTTGAAATATTTGATATTAAAACGGTAAGTCAGGAAAATAGGTTAATCG GCAATATTTTAATAGAAAATAATTTAGGTTTGGCCCCAAAAGAAGTTGTGGGATTTGAAAATCATGGTGGAAGGACATTT CATAATTATAAAACCTTAGGTAATGTTATAGCAGGGCATGGCAATAATGATGAAGACGGTGAGGAAGGAATGATTTATAA AAACTTTATTGGAACATATTTGCACGGTCCTTTTCTACCAAAAAACCCTCACATTGCGGACTATTTAATATTGAATGCTA TGAAGAATAAGTATAATGTAGATTCAATTGAAGAGTTAGATGATGAAATTGAATTTAAAGCACATGATGTTATGGTTAAC AGATTGAAATAA
Upstream 100 bases:
>100_bases AAGAAATTGTAGCTGAAAATGATAAGGCATATATTATTGGAACATTCACGGCAATGCCTGAAGCTAGAAAAGTACTTATG AAACTTAAAGGGGAAAAAGC
Downstream 100 bases:
>100_bases TCTGTTTAATCCTCTTTTTTAGAATTGCTGTGGTTTTTTAAATACTGACCTAATGTTTTATAAGTAATAAAGATAAAAAT ATAATTATCTAATTAATAAT
Product: glutamine amidotransferase
Products: NA
Alternate protein names: Cobyric Acid Synthase; CobB/CobQ Domain Protein Glutamine Amidotransferase; Cobyric Acid Synthase CobQ; CobB/CobQ-Like Glutamine Amidotransferase; CobB/CobQ-Like Glutamine Amidotransferase Domain Protein; Adenosylcobyric Acid Synthase; Amidotransferase; Glutamine Amidotransferase CobB/CobQ Family; CobB/CobQ-Like Protein; Cobb/Cobq Domain Protein Glutamine Amidotransferase; Glutamine Amidotransferase Domain Protein; CobB/CobQ Family Glutamine Amidotransferase; Glutamine Amidotransferase Domain-Containing Protein; Cobyric Acid; Cobyric Acid Synthase Glutamine Amidotransferase; Glutamine Amidotransferase-Like Protein; Cobyric Acid Synthase Cobq; Cobyric Acid Synthase Like
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSFELNIVDMYSDILNIYGDIGNLKCIKKRCEWRGIKVNQKSYSLNHDMDFDYEDIDLILIGGGSDRTQSIVSNDLLKQR NDLENYVENDGVILTVCGSYQMFGHEYYDVNGDNVSCLEIFDIKTVSQENRLIGNILIENNLGLAPKEVVGFENHGGRTF HNYKTLGNVIAGHGNNDEDGEEGMIYKNFIGTYLHGPFLPKNPHIADYLILNAMKNKYNVDSIEELDDEIEFKAHDVMVN RLK
Sequences:
>Translated_243_residues MSFELNIVDMYSDILNIYGDIGNLKCIKKRCEWRGIKVNQKSYSLNHDMDFDYEDIDLILIGGGSDRTQSIVSNDLLKQR NDLENYVENDGVILTVCGSYQMFGHEYYDVNGDNVSCLEIFDIKTVSQENRLIGNILIENNLGLAPKEVVGFENHGGRTF HNYKTLGNVIAGHGNNDEDGEEGMIYKNFIGTYLHGPFLPKNPHIADYLILNAMKNKYNVDSIEELDDEIEFKAHDVMVN RLK >Mature_242_residues SFELNIVDMYSDILNIYGDIGNLKCIKKRCEWRGIKVNQKSYSLNHDMDFDYEDIDLILIGGGSDRTQSIVSNDLLKQRN DLENYVENDGVILTVCGSYQMFGHEYYDVNGDNVSCLEIFDIKTVSQENRLIGNILIENNLGLAPKEVVGFENHGGRTFH NYKTLGNVIAGHGNNDEDGEEGMIYKNFIGTYLHGPFLPKNPHIADYLILNAMKNKYNVDSIEELDDEIEFKAHDVMVNR LK
Specific function: Unknown
COG id: COG3442
COG function: function code R; Predicted glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27700; Mature: 27569
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFELNIVDMYSDILNIYGDIGNLKCIKKRCEWRGIKVNQKSYSLNHDMDFDYEDIDLIL CCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEE IGGGSDRTQSIVSNDLLKQRNDLENYVENDGVILTVCGSYQMFGHEYYDVNGDNVSCLEI EECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEECCCEEEECCCCCEEEEEE FDIKTVSQENRLIGNILIENNLGLAPKEVVGFENHGGRTFHNYKTLGNVIAGHGNNDEDG EEEEECCCCCCEEEEEEEECCCCCCHHHHCCCCCCCCCEEHHHHHHHHHEECCCCCCCCC EEGMIYKNFIGTYLHGPFLPKNPHIADYLILNAMKNKYNVDSIEELDDEIEFKAHDVMVN CCCCEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC RLK CCC >Mature Secondary Structure SFELNIVDMYSDILNIYGDIGNLKCIKKRCEWRGIKVNQKSYSLNHDMDFDYEDIDLIL CEEEEHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEE IGGGSDRTQSIVSNDLLKQRNDLENYVENDGVILTVCGSYQMFGHEYYDVNGDNVSCLEI EECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEECCCEEEECCCCCEEEEEE FDIKTVSQENRLIGNILIENNLGLAPKEVVGFENHGGRTFHNYKTLGNVIAGHGNNDEDG EEEEECCCCCCEEEEEEEECCCCCCHHHHCCCCCCCCCEEHHHHHHHHHEECCCCCCCCC EEGMIYKNFIGTYLHGPFLPKNPHIADYLILNAMKNKYNVDSIEELDDEIEFKAHDVMVN CCCCEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC RLK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA