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The map label for this gene is rpl44e [H]

Identifier: 148643195

GI number: 148643195

Start: 1113067

End: 1113345

Strand: Reverse

Name: rpl44e [H]

Synonym: Msm_1135

Alternate gene names: 148643195

Gene position: 1113345-1113067 (Counterclockwise)

Preceding gene: 148643196

Following gene: 148643194

Centisome position: 60.08

GC content: 32.26

Gene sequence:

>279_bases
ATGAAAATACCAAAAGAAAAAAGAACTTACTGTCCACATTGTAAAAAACACACAATGCATGAAGTACATACTGCGAAAAA
AAGAAAAGCTAGTGAGTTAAAATGGGGACAAAGACAATTCAGACGTGTAACTGCTGGATATAGAGGTTACCCAAGGCCTT
TACCTGCCGGAAACAAACCAGTTAAAAAATTAGATTTAAGACTTAAATGTAAAGAATGTGGAAAATCTCAAATTAAAAAA
TCATTCAGAACTGGTAAAGCAGAATTTGTAGCTAAATAA

Upstream 100 bases:

>100_bases
TAGATCTTTGATATTTTTCAGACTGGATAAAATTCTCATATAGATTTATAATAATTTAATTAATCGGACACTTTTTAGTG
TAAAATTTAATGGTGGAAAT

Downstream 100 bases:

>100_bases
GGTGGTTAACATGGTTAGTAAAGGTAGAGGAAACTTTTTAAAAGTAAAATGTTTAGATTGTGACAATGAACAAATCATCT
TTGATCGTGCTGCATCAGAT

Product: 50S ribosomal protein L44e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MKIPKEKRTYCPHCKKHTMHEVHTAKKRKASELKWGQRQFRRVTAGYRGYPRPLPAGNKPVKKLDLRLKCKECGKSQIKK
SFRTGKAEFVAK

Sequences:

>Translated_92_residues
MKIPKEKRTYCPHCKKHTMHEVHTAKKRKASELKWGQRQFRRVTAGYRGYPRPLPAGNKPVKKLDLRLKCKECGKSQIKK
SFRTGKAEFVAK
>Mature_92_residues
MKIPKEKRTYCPHCKKHTMHEVHTAKKRKASELKWGQRQFRRVTAGYRGYPRPLPAGNKPVKKLDLRLKCKECGKSQIKK
SFRTGKAEFVAK

Specific function: Unknown

COG id: COG1631

COG function: function code J; Ribosomal protein L44E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L44e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000552
- InterPro:   IPR011332
- ProDom:   PD002841 [H]

Pfam domain/function: PF00935 Ribosomal_L44 [H]

EC number: NA

Molecular weight: Translated: 10766; Mature: 10766

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: PS01172 RIBOSOMAL_L44E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPKEKRTYCPHCKKHTMHEVHTAKKRKASELKWGQRQFRRVTAGYRGYPRPLPAGNKP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VKKLDLRLKCKECGKSQIKKSFRTGKAEFVAK
HHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MKIPKEKRTYCPHCKKHTMHEVHTAKKRKASELKWGQRQFRRVTAGYRGYPRPLPAGNKP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VKKLDLRLKCKECGKSQIKKSFRTGKAEFVAK
HHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]