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The map label for this gene is rps27e [H]

Identifier: 148643194

GI number: 148643194

Start: 1112877

End: 1113056

Strand: Reverse

Name: rps27e [H]

Synonym: Msm_1134

Alternate gene names: 148643194

Gene position: 1113056-1112877 (Counterclockwise)

Preceding gene: 148643195

Following gene: 148643193

Centisome position: 60.06

GC content: 30.56

Gene sequence:

>180_bases
ATGGTTAGTAAAGGTAGAGGAAACTTTTTAAAAGTAAAATGTTTAGATTGTGACAATGAACAAATCATCTTTGATCGTGC
TGCATCAGATGTAAAATGTATCATTTGTGGTAAAACACTTGTCAAATCTCGTGGTGCTAAAGCTAAAATTATGGCACATA
TTGATAAAGTTTTAAACTAG

Upstream 100 bases:

>100_bases
TTAGATTTAAGACTTAAATGTAAAGAATGTGGAAAATCTCAAATTAAAAAATCATTCAGAACTGGTAAAGCAGAATTTGT
AGCTAAATAAGGTGGTTAAC

Downstream 100 bases:

>100_bases
ATTCAATCGAAATTTTTTAATCTAGCTTATTATTTTTTCTATTTTTTTTTAAATTTTTATTTTATTTTTGGTGATTATAT
GGTAAGGAAAAATCAAGAAT

Product: 30S ribosomal protein S27e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MVSKGRGNFLKVKCLDCDNEQIIFDRAASDVKCIICGKTLVKSRGAKAKIMAHIDKVLN

Sequences:

>Translated_59_residues
MVSKGRGNFLKVKCLDCDNEQIIFDRAASDVKCIICGKTLVKSRGAKAKIMAHIDKVLN
>Mature_59_residues
MVSKGRGNFLKVKCLDCDNEQIIFDRAASDVKCIICGKTLVKSRGAKAKIMAHIDKVLN

Specific function: Unknown

COG id: COG2051

COG function: function code J; Ribosomal protein S27E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S27e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000592
- InterPro:   IPR022959
- InterPro:   IPR011332 [H]

Pfam domain/function: PF01667 Ribosomal_S27e [H]

EC number: NA

Molecular weight: Translated: 6495; Mature: 6495

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS01168 RIBOSOMAL_S27E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSKGRGNFLKVKCLDCDNEQIIFDRAASDVKCIICGKTLVKSRGAKAKIMAHIDKVLN
CCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MVSKGRGNFLKVKCLDCDNEQIIFDRAASDVKCIICGKTLVKSRGAKAKIMAHIDKVLN
CCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]