| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is coaBC [H]
Identifier: 148643108
GI number: 148643108
Start: 1010626
End: 1011240
Strand: Reverse
Name: coaBC [H]
Synonym: Msm_1048
Alternate gene names: 148643108
Gene position: 1011240-1010626 (Counterclockwise)
Preceding gene: 148643109
Following gene: 148643105
Centisome position: 54.57
GC content: 31.38
Gene sequence:
>615_bases ATGGGTGGAACTTATGAACCTATTGATCCGATAAGGGGAATAACCAACAAATCCTCTGGAAAAATGGGTTTGGAATTAGC TAAACAGGCTTATATTCGTGGATTTGATGTTACACTAATTGTAGCTAATGTTAGTGTAAGAATCCCTTCAGTATTTAATG TTATTAAAGTTGAAACAGCTGGAGAAATGAATAAAGCAATTAAGAAATTAATTCCGAGTCAGGATATTTTTATTTCAACA GCTGCAGTTTCTGATTTTAAATTTGAAGATAAGGACACTCATAAAATTGATTCTTCAAAGGCACTGTCTATAAATTTAAA ACCAACCATTAAAATCATCCGCCAGATTAAAGAATTGAATCCGGATATTTTTTTAGTTGGATTTAAGGCGGAAGTTAATA TTTCTAAAGAAGACATAATAGCCAGTGCAAAACAACAGATTAAAGATGCAGGAACAGATTTGGTAATAGCTAATGATGTT AGTGATGAGAATTGTCATTTTGGTTCAGATAATAATAAGGTTTGGATTGTAGACGATGATATTGTAAGTGTTCCGCTGTC TTCAAAAAAAGAAATAGCCAATATCATTTTTGATGTTATTTTGGAAAAGATTTAG
Upstream 100 bases:
>100_bases AGCAAAATTCCCAGATAAAGAAGATATAGTTTTAGAAGCATTAAGAACAATTAATTTAAATAAATGAGGTGGTTTTATCC ACGAAAAAGTTTTAATAAGT
Downstream 100 bases:
>100_bases GGATATGTGCAATTTTTAGGCCTTAAAAAGTAATATTTTTTAGTTAAAATAACTTTTTTTAAACATTTATTGAAAATTTG GTAAAAATAAGTATTTTTTA
Product: phosphopantothenoylcysteine synthetase/decarboxylase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MGGTYEPIDPIRGITNKSSGKMGLELAKQAYIRGFDVTLIVANVSVRIPSVFNVIKVETAGEMNKAIKKLIPSQDIFIST AAVSDFKFEDKDTHKIDSSKALSINLKPTIKIIRQIKELNPDIFLVGFKAEVNISKEDIIASAKQQIKDAGTDLVIANDV SDENCHFGSDNNKVWIVDDDIVSVPLSSKKEIANIIFDVILEKI
Sequences:
>Translated_204_residues MGGTYEPIDPIRGITNKSSGKMGLELAKQAYIRGFDVTLIVANVSVRIPSVFNVIKVETAGEMNKAIKKLIPSQDIFIST AAVSDFKFEDKDTHKIDSSKALSINLKPTIKIIRQIKELNPDIFLVGFKAEVNISKEDIIASAKQQIKDAGTDLVIANDV SDENCHFGSDNNKVWIVDDDIVSVPLSSKKEIANIIFDVILEKI >Mature_203_residues GGTYEPIDPIRGITNKSSGKMGLELAKQAYIRGFDVTLIVANVSVRIPSVFNVIKVETAGEMNKAIKKLIPSQDIFISTA AVSDFKFEDKDTHKIDSSKALSINLKPTIKIIRQIKELNPDIFLVGFKAEVNISKEDIIASAKQQIKDAGTDLVIANDVS DENCHFGSDNNKVWIVDDDIVSVPLSSKKEIANIIFDVILEKI
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Escherichia coli, GI87082301, Length=216, Percent_Identity=36.1111111111111, Blast_Score=100, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 22432; Mature: 22301
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGTYEPIDPIRGITNKSSGKMGLELAKQAYIRGFDVTLIVANVSVRIPSVFNVIKVETA CCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEECCCCEEEEEEECC GEMNKAIKKLIPSQDIFISTAAVSDFKFEDKDTHKIDSSKALSINLKPTIKIIRQIKELN HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCC PDIFLVGFKAEVNISKEDIIASAKQQIKDAGTDLVIANDVSDENCHFGSDNNKVWIVDDD CCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCEEEEEECC IVSVPLSSKKEIANIIFDVILEKI EEECCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure GGTYEPIDPIRGITNKSSGKMGLELAKQAYIRGFDVTLIVANVSVRIPSVFNVIKVETA CCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEECCCCEEEEEEECC GEMNKAIKKLIPSQDIFISTAAVSDFKFEDKDTHKIDSSKALSINLKPTIKIIRQIKELN HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCC PDIFLVGFKAEVNISKEDIIASAKQQIKDAGTDLVIANDVSDENCHFGSDNNKVWIVDDD CCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCEEEEEECC IVSVPLSSKKEIANIIFDVILEKI EEECCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA