| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
Click here to switch to the map view.
The map label for this gene is 148643055
Identifier: 148643055
GI number: 148643055
Start: 956304
End: 959159
Strand: Reverse
Name: 148643055
Synonym: Msm_0995
Alternate gene names: NA
Gene position: 959159-956304 (Counterclockwise)
Preceding gene: 148643056
Following gene: 148643054
Centisome position: 51.76
GC content: 30.01
Gene sequence:
>2856_bases ATGAATTTTAAGTATTTAATATTTTTATGTTTGATGTTTATTGTTTCAATGGGTGCAGTAAGTGCTGCAGATGATGTTAA CAGCACTTTCAATGCAAATATTGATGTAAATGATGTGCCTGTTGATTCAGTTATTATTGATAATCCTATTTATACAAATA ATGCAAAGGAATACACAATAACAAATGACAATTATGGAAATTATTTTGATAATGAAACTGGTGATGCATTAGAAGAGGCT CCTTTTAATAATGGAGATATTTTAAAAATTGATAATGTGTCTGATAAATATTTTGTAATAAATAAAAATTTAACTATCAT GCCTGCGGGAGATAATATTACCTTGAAAAATGTAGGGTTTAATTTTGTTCCTGGAAGTGAAGGTTCTGTTGTAAATGGGT TAACTATTGACAATAATGTTGGCAAATGGAGTAATAATGATGCTATACAATTAGTACCTATTTTAATTCAGCATGCTAAA GATATAACCGTTATTAATTCTTATATTCATTCATCAGCAGCTTCTGTTCCAGCAATTAACGGGGCGATTTATATGATGAA TGCTTCTTATTGTAATATCAGGAACAATACCATTTCTCAATCTTCAGGTAAAACTCCAATACAGATTGTTTCATCAAGTT ATAATAATATGACTGATAATAAAATATATTCTAAAGCTTCAAATGTTATTTTTATAGGAATGGGTTTCAATACTTATAGT GTAGCTGGTATTAGTGAATTCAACATATTTAAAAACAACATCATAAATGGAACTACTGGTATAAGTTCTGCGGGGTGTTA TGCAATTAAGTTGCAGGGCAATTCCAAGCAGAATAAACTCGTTGGTCAGAATACTTTTATAGGTAATGTCATATCTAATG CATTTGTAGGTGTTAATGCTGTGGCAGATGTTGGGGAAGTAGTTATAATTAATAACACTTTTGTTAATATTAAAACAGGA ATTGATGTGTCCACTAATGTTGTTGGTGGGGGTATAGTTGTTAAAGGCAACTCTATAAATGTATCTAATATTGGTATTTC ACTTAAAAAAGGATATGGTATAATTGAAAATAACACAATTGATGCTGTTGGAGATGGAATTCAACTTGCTGCAAATGCAA AAAATATTACTGTAGACAATAATGTGATTATTTCCGGTAAAAATTATGCAGTATCTGTTGCAGGTACTACAGGTACCAAT ACATCCATAACTAACAATTATATTATTTCTAAAGACTATTATGGAAATGGTGCGGTTACTTCAAAAAGCAACGATACAAT AATAGAAAACAACACTCCTGCTGGTGCTTCAATCAATGCAGATATATCTGCTATCATAAATAAAAATGCTACAATCAAAA TTGATGTTTTACCATTTGATGCTAATGGTAATGTAACTATTAAGTTTAATGGAAAATCTGAAACTATTAATTTCAACGCT TCACAAACTATTGTTTATGATTTGGGAGTTTTAGGTGTTGGAGATTATGAGGTTACTGTAATTTATAATGGCAATGCTAA ATATAATGCAACCAACATTACTAAAACTTTTTCAATTGGCAAAATTTCTGATTATAATGTAACTTTAAACACTACTGATG TTGTCGCCGGTGAAAATTCAACTCTTGTTATAATTTTACCTGAAGATGCAACTGGTGTTGTCAATGTTACTGTTGGAAAA GATTCATACAAAGCAAATGTAACTGATGGAGTAGCTAGTGTAAAAATCAACTCTTTAATTGCTGGTGATTATAAAGTAAA TGTTACATATTCAGGAGATAAAACTTATGAAGTTTCAAATAATGTATTTAATTTAGCTGTTAATCCAATGAAAGTTAATT TAAATATTTCTGATGTTGTAATGTTCTATCGTGATGGAACAAGAATGGCAGCTATTTTAACTGATATTAAAGGCAATCCT ATAGCTAATGCAACATTATACTTTACAATTAACGGTCAAACATATAAGAAAACTACTGATGCTAATGGAACTGCTTCTTT AGGCATTAATTTAGTATCAAAAATATATAATGCAACTGTTTCTTATAATGGTTCAGATATTTATGATAAGCTCTCTAAAA ACATTACTGTAACTGTCAATCCAACTATTTTAGCTAATGATACTGTTTTAATGTATAAGGACGGCACTGAGTTTGTTGCA AAATTCTTGGATAAAACCGGAAAAGCATTAGCTAATACTTCAGTTAAATTCAACATCAATGGGGTGTTCTACACTAAAAC TACTGATGCTGAGGGTATTGCTAAATTAGGTATTAGGTTGAGGCCTGGAGCTTATATTTTAACTGCTTATAATGATATAA CTGGTGAAGAAAAAGGATTTGATGTAACTGTCAAATCTTTAATTGCAGCTAATGATTTAACTAAATATTATATGAATGCA TCAAGATTTGAAGCAACTATCTACAATAAAGATGGAACTTTAGCTATCAATAAAAATGTAACTTTCAATATTAACGGTGT ATTCTATCACAAAACTACTGATGAAAATGGTGTAGCTAGTTTAGGTATTGCTTTAAGACCTGGAAATTACATTATTACTA CTATTGTTGATGATTTGGCTATGGGTAATAATGTAAATGTATTGCCGACTTTAGTAACAAGTGATCTCTCTATGAAATAC CTTGACGGCAGCAGTTTTACTGCTCAAGCATTAGACGGTCAAGGCAATCCATTAGCTAATCAGAATGTATCATTTAATGT AAATGGTGTATTCTATCACAAAGTAACTGATAAAGATGGTATTGCATCATTGAATATAAGGTTAATGGCTGGACAATATA TTATTACTTCATATTGGAACAGTTTCCAAGTGGGAAACACTATAAAAATAGCTTAA
Upstream 100 bases:
>100_bases AACATTTAAATATTTTAATTTTCCATATATTATATATCAAAAATATTTTAATTATTTACAAATATTTTTGATTAGATTAT AAAATGGAGGAAACATATTA
Downstream 100 bases:
>100_bases AGGGGATTTAATTAAATCTCATTTTTCTTTCTTTTTTTTTAAAATTATAAATCATAAAATTTTTTTAATTTAACTTTCAT ATTATAAATCATGTCATTAA
Product: adhesin-like protein
Products: NA
Alternate protein names: Adhesin-Like Protein With Transglutaminase Domain; Cysteine Protease; Adhesin-Like Protein With Cysteine Protease Domain; Asn/Thr-Rich Large Protein Family Protein; Transglutaminase-Like Protein Cysteine Protease
Number of amino acids: Translated: 951; Mature: 951
Protein sequence:
>951_residues MNFKYLIFLCLMFIVSMGAVSAADDVNSTFNANIDVNDVPVDSVIIDNPIYTNNAKEYTITNDNYGNYFDNETGDALEEA PFNNGDILKIDNVSDKYFVINKNLTIMPAGDNITLKNVGFNFVPGSEGSVVNGLTIDNNVGKWSNNDAIQLVPILIQHAK DITVINSYIHSSAASVPAINGAIYMMNASYCNIRNNTISQSSGKTPIQIVSSSYNNMTDNKIYSKASNVIFIGMGFNTYS VAGISEFNIFKNNIINGTTGISSAGCYAIKLQGNSKQNKLVGQNTFIGNVISNAFVGVNAVADVGEVVIINNTFVNIKTG IDVSTNVVGGGIVVKGNSINVSNIGISLKKGYGIIENNTIDAVGDGIQLAANAKNITVDNNVIISGKNYAVSVAGTTGTN TSITNNYIISKDYYGNGAVTSKSNDTIIENNTPAGASINADISAIINKNATIKIDVLPFDANGNVTIKFNGKSETINFNA SQTIVYDLGVLGVGDYEVTVIYNGNAKYNATNITKTFSIGKISDYNVTLNTTDVVAGENSTLVIILPEDATGVVNVTVGK DSYKANVTDGVASVKINSLIAGDYKVNVTYSGDKTYEVSNNVFNLAVNPMKVNLNISDVVMFYRDGTRMAAILTDIKGNP IANATLYFTINGQTYKKTTDANGTASLGINLVSKIYNATVSYNGSDIYDKLSKNITVTVNPTILANDTVLMYKDGTEFVA KFLDKTGKALANTSVKFNINGVFYTKTTDAEGIAKLGIRLRPGAYILTAYNDITGEEKGFDVTVKSLIAANDLTKYYMNA SRFEATIYNKDGTLAINKNVTFNINGVFYHKTTDENGVASLGIALRPGNYIITTIVDDLAMGNNVNVLPTLVTSDLSMKY LDGSSFTAQALDGQGNPLANQNVSFNVNGVFYHKVTDKDGIASLNIRLMAGQYIITSYWNSFQVGNTIKIA
Sequences:
>Translated_951_residues MNFKYLIFLCLMFIVSMGAVSAADDVNSTFNANIDVNDVPVDSVIIDNPIYTNNAKEYTITNDNYGNYFDNETGDALEEA PFNNGDILKIDNVSDKYFVINKNLTIMPAGDNITLKNVGFNFVPGSEGSVVNGLTIDNNVGKWSNNDAIQLVPILIQHAK DITVINSYIHSSAASVPAINGAIYMMNASYCNIRNNTISQSSGKTPIQIVSSSYNNMTDNKIYSKASNVIFIGMGFNTYS VAGISEFNIFKNNIINGTTGISSAGCYAIKLQGNSKQNKLVGQNTFIGNVISNAFVGVNAVADVGEVVIINNTFVNIKTG IDVSTNVVGGGIVVKGNSINVSNIGISLKKGYGIIENNTIDAVGDGIQLAANAKNITVDNNVIISGKNYAVSVAGTTGTN TSITNNYIISKDYYGNGAVTSKSNDTIIENNTPAGASINADISAIINKNATIKIDVLPFDANGNVTIKFNGKSETINFNA SQTIVYDLGVLGVGDYEVTVIYNGNAKYNATNITKTFSIGKISDYNVTLNTTDVVAGENSTLVIILPEDATGVVNVTVGK DSYKANVTDGVASVKINSLIAGDYKVNVTYSGDKTYEVSNNVFNLAVNPMKVNLNISDVVMFYRDGTRMAAILTDIKGNP IANATLYFTINGQTYKKTTDANGTASLGINLVSKIYNATVSYNGSDIYDKLSKNITVTVNPTILANDTVLMYKDGTEFVA KFLDKTGKALANTSVKFNINGVFYTKTTDAEGIAKLGIRLRPGAYILTAYNDITGEEKGFDVTVKSLIAANDLTKYYMNA SRFEATIYNKDGTLAINKNVTFNINGVFYHKTTDENGVASLGIALRPGNYIITTIVDDLAMGNNVNVLPTLVTSDLSMKY LDGSSFTAQALDGQGNPLANQNVSFNVNGVFYHKVTDKDGIASLNIRLMAGQYIITSYWNSFQVGNTIKIA >Mature_951_residues MNFKYLIFLCLMFIVSMGAVSAADDVNSTFNANIDVNDVPVDSVIIDNPIYTNNAKEYTITNDNYGNYFDNETGDALEEA PFNNGDILKIDNVSDKYFVINKNLTIMPAGDNITLKNVGFNFVPGSEGSVVNGLTIDNNVGKWSNNDAIQLVPILIQHAK DITVINSYIHSSAASVPAINGAIYMMNASYCNIRNNTISQSSGKTPIQIVSSSYNNMTDNKIYSKASNVIFIGMGFNTYS VAGISEFNIFKNNIINGTTGISSAGCYAIKLQGNSKQNKLVGQNTFIGNVISNAFVGVNAVADVGEVVIINNTFVNIKTG IDVSTNVVGGGIVVKGNSINVSNIGISLKKGYGIIENNTIDAVGDGIQLAANAKNITVDNNVIISGKNYAVSVAGTTGTN TSITNNYIISKDYYGNGAVTSKSNDTIIENNTPAGASINADISAIINKNATIKIDVLPFDANGNVTIKFNGKSETINFNA SQTIVYDLGVLGVGDYEVTVIYNGNAKYNATNITKTFSIGKISDYNVTLNTTDVVAGENSTLVIILPEDATGVVNVTVGK DSYKANVTDGVASVKINSLIAGDYKVNVTYSGDKTYEVSNNVFNLAVNPMKVNLNISDVVMFYRDGTRMAAILTDIKGNP IANATLYFTINGQTYKKTTDANGTASLGINLVSKIYNATVSYNGSDIYDKLSKNITVTVNPTILANDTVLMYKDGTEFVA KFLDKTGKALANTSVKFNINGVFYTKTTDAEGIAKLGIRLRPGAYILTAYNDITGEEKGFDVTVKSLIAANDLTKYYMNA SRFEATIYNKDGTLAINKNVTFNINGVFYHKTTDENGVASLGIALRPGNYIITTIVDDLAMGNNVNVLPTLVTSDLSMKY LDGSSFTAQALDGQGNPLANQNVSFNVNGVFYHKVTDKDGIASLNIRLMAGQYIITSYWNSFQVGNTIKIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101853; Mature: 101853
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS50194 FILAMIN_REPEAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKYLIFLCLMFIVSMGAVSAADDVNSTFNANIDVNDVPVDSVIIDNPIYTNNAKEYTI CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCEECCCCCCCEEEECCCEEECCCEEEEE TNDNYGNYFDNETGDALEEAPFNNGDILKIDNVSDKYFVINKNLTIMPAGDNITLKNVGF ECCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCEEEEECCEEEEECCCCEEEEECCE NFVPGSEGSVVNGLTIDNNVGKWSNNDAIQLVPILIQHAKDITVINSYIHSSAASVPAIN EECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEHHHCCCCEEEEHHHHHCCCCCCCEEC GAIYMMNASYCNIRNNTISQSSGKTPIQIVSSSYNNMTDNKIYSKASNVIFIGMGFNTYS CEEEEEECEEEEECCCEECCCCCCCEEEEEECCCCCCCCCHHHHCCCCEEEEEECCCCEE VAGISEFNIFKNNIINGTTGISSAGCYAIKLQGNSKQNKLVGQNTFIGNVISNAFVGVNA ECCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEHHHHHHHEECCEE VADVGEVVIINNTFVNIKTGIDVSTNVVGGGIVVKGNSINVSNIGISLKKGYGIIENNTI CCCCCCEEEEECEEEEEEECCCEECEEECCEEEEECCEEEEEEEEEEEECCCEEEECCEE DAVGDGIQLAANAKNITVDNNVIISGKNYAVSVAGTTGTNTSITNNYIISKDYYGNGAVT EECCCCEEEEECCCEEEECCCEEEECCCEEEEEEECCCCCCEEECCEEEEEEECCCCEEE SKSNDTIIENNTPAGASINADISAIINKNATIKIDVLPFDANGNVTIKFNGKSETINFNA CCCCCEEEECCCCCCCEECCCEEEEECCCCEEEEEEEEECCCCCEEEEECCCCEEEEECC SQTIVYDLGVLGVGDYEVTVIYNGNAKYNATNITKTFSIGKISDYNVTLNTTDVVAGENS CCEEEEEEEEEEECCEEEEEEECCCCEEEECCEEEEEEECCEECCEEEEECEEEEECCCC TLVIILPEDATGVVNVTVGKDSYKANVTDGVASVKINSLIAGDYKVNVTYSGDKTYEVSN EEEEEECCCCCCEEEEEECCCCEEEECCCCEEEEEEEEEEECCEEEEEEECCCEEEEECC NVFNLAVNPMKVNLNISDVVMFYRDGTRMAAILTDIKGNPIANATLYFTINGQTYKKTTD CEEEEEEEEEEEEEEHHEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEECCEEEEEECC ANGTASLGINLVSKIYNATVSYNGSDIYDKLSKNITVTVNPTILANDTVLMYKDGTEFVA CCCEEEHHHHHHHHHHEEEEEECCCHHHHHHCCCEEEEECCEEEECCEEEEEECCHHHHH KFLDKTGKALANTSVKFNINGVFYTKTTDAEGIAKLGIRLRPGAYILTAYNDITGEEKGF HHHHHCCHHHHCCEEEEEEEEEEEEECCCCCCHHCCCEEECCCEEEEEEECCCCCCCCCC DVTVKSLIAANDLTKYYMNASRFEATIYNKDGTLAINKNVTFNINGVFYHKTTDENGVAS EEEEHHHHHHCCHHHHHCCCCCEEEEEECCCCCEEECCCEEEEEEEEEEEECCCCCCEEE LGIALRPGNYIITTIVDDLAMGNNVNVLPTLVTSDLSMKYLDGSSFTAQALDGQGNPLAN EEEEECCCCEEEEEEEHHHHCCCCCEEEEEEEECCCEEEEECCCCEEEEEECCCCCCCCC QNVSFNVNGVFYHKVTDKDGIASLNIRLMAGQYIITSYWNSFQVGNTIKIA CCEEEEEEEEEEEEECCCCCEEEEEEEEEECCEEEEECCCCEECCCEEEEC >Mature Secondary Structure MNFKYLIFLCLMFIVSMGAVSAADDVNSTFNANIDVNDVPVDSVIIDNPIYTNNAKEYTI CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCEECCCCCCCEEEECCCEEECCCEEEEE TNDNYGNYFDNETGDALEEAPFNNGDILKIDNVSDKYFVINKNLTIMPAGDNITLKNVGF ECCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCEEEEECCEEEEECCCCEEEEECCE NFVPGSEGSVVNGLTIDNNVGKWSNNDAIQLVPILIQHAKDITVINSYIHSSAASVPAIN EECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEHHHCCCCEEEEHHHHHCCCCCCCEEC GAIYMMNASYCNIRNNTISQSSGKTPIQIVSSSYNNMTDNKIYSKASNVIFIGMGFNTYS CEEEEEECEEEEECCCEECCCCCCCEEEEEECCCCCCCCCHHHHCCCCEEEEEECCCCEE VAGISEFNIFKNNIINGTTGISSAGCYAIKLQGNSKQNKLVGQNTFIGNVISNAFVGVNA ECCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEHHHHHHHEECCEE VADVGEVVIINNTFVNIKTGIDVSTNVVGGGIVVKGNSINVSNIGISLKKGYGIIENNTI CCCCCCEEEEECEEEEEEECCCEECEEECCEEEEECCEEEEEEEEEEEECCCEEEECCEE DAVGDGIQLAANAKNITVDNNVIISGKNYAVSVAGTTGTNTSITNNYIISKDYYGNGAVT EECCCCEEEEECCCEEEECCCEEEECCCEEEEEEECCCCCCEEECCEEEEEEECCCCEEE SKSNDTIIENNTPAGASINADISAIINKNATIKIDVLPFDANGNVTIKFNGKSETINFNA CCCCCEEEECCCCCCCEECCCEEEEECCCCEEEEEEEEECCCCCEEEEECCCCEEEEECC SQTIVYDLGVLGVGDYEVTVIYNGNAKYNATNITKTFSIGKISDYNVTLNTTDVVAGENS CCEEEEEEEEEEECCEEEEEEECCCCEEEECCEEEEEEECCEECCEEEEECEEEEECCCC TLVIILPEDATGVVNVTVGKDSYKANVTDGVASVKINSLIAGDYKVNVTYSGDKTYEVSN EEEEEECCCCCCEEEEEECCCCEEEECCCCEEEEEEEEEEECCEEEEEEECCCEEEEECC NVFNLAVNPMKVNLNISDVVMFYRDGTRMAAILTDIKGNPIANATLYFTINGQTYKKTTD CEEEEEEEEEEEEEEHHEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEECCEEEEEECC ANGTASLGINLVSKIYNATVSYNGSDIYDKLSKNITVTVNPTILANDTVLMYKDGTEFVA CCCEEEHHHHHHHHHHEEEEEECCCHHHHHHCCCEEEEECCEEEECCEEEEEECCHHHHH KFLDKTGKALANTSVKFNINGVFYTKTTDAEGIAKLGIRLRPGAYILTAYNDITGEEKGF HHHHHCCHHHHCCEEEEEEEEEEEEECCCCCCHHCCCEEECCCEEEEEEECCCCCCCCCC DVTVKSLIAANDLTKYYMNASRFEATIYNKDGTLAINKNVTFNINGVFYHKTTDENGVAS EEEEHHHHHHCCHHHHHCCCCCEEEEEECCCCCEEECCCEEEEEEEEEEEECCCCCCEEE LGIALRPGNYIITTIVDDLAMGNNVNVLPTLVTSDLSMKYLDGSSFTAQALDGQGNPLAN EEEEECCCCEEEEEEEHHHHCCCCCEEEEEEEECCCEEEEECCCCEEEEEECCCCCCCCC QNVSFNVNGVFYHKVTDKDGIASLNIRLMAGQYIITSYWNSFQVGNTIKIA CCEEEEEEEEEEEEECCCCCEEEEEEEEEECCEEEEECCCCEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA