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The map label for this gene is 148643032

Identifier: 148643032

GI number: 148643032

Start: 934401

End: 935111

Strand: Reverse

Name: 148643032

Synonym: Msm_0972

Alternate gene names: NA

Gene position: 935111-934401 (Counterclockwise)

Preceding gene: 148643033

Following gene: 148643031

Centisome position: 50.46

GC content: 30.8

Gene sequence:

>711_bases
ATGGCTGGAATAACTGATGCTGAATTTTTAAATAAGGTTATTCCATTTGGATTTGACACAGCTACATTAGGTGGTTACAG
TTTAGATGCTAAAACAATAGAAGCTAGTGAAAAAATAATTAAAAGGGGAAGAAATGAATTTCATTTTCCTCAAGATGAAA
TTGTTAACCATATTGAAAAAGAAGTTAATCTGATTAAAAAACAACATCCGAATGTTAAAGTTTCAGCTAATGTTAGATCA
ACTACTCCTAGGCCTATTATTGAAGTAAGTAACATAGACAATTTGGATATTGTTGAAATTAATTGTCATTGTCGTCAGGA
TGAAATTTTGGCTATTGGCTGTGGTCAAAATATGTTGAAAAGAGATGATTTGGCTGAGTATATTGGGGATGTTGTTGACA
ATGCTTCTTGTGAAGTTTCAGTTAAAATTCGAGCTAATGTTGATGGTATTGACACTTTAAAAATAGCTAAATTAATTGAA
AACACAGGGGCTGACTATCTGCATATTGATGCAATGAAAGTTGGAATTTTTGATGCCGACTATGATTTGTTGGCGAAAAT
CTGTTCTAACACCAATATTAAAGTTATTGGAAATAATTCTATAGATAGCGAACAAAAAATTGAAAAAATGCTTAAAACAG
GAGTTTTTGGCTTTTCAATAGCTAGGGCGGTTATTTCCGGTAAATTAAACTTTAATATATCTGATTTTTAA

Upstream 100 bases:

>100_bases
TTTGGGACTTGAAGAAATCCGTGATCATGATAATGGAATGTGGACATGGGTTATTGAAAAAGAATATTAAGGGGGCTTCT
AAATTAAAGTCATAGCTCCA

Downstream 100 bases:

>100_bases
ATATATAACACCATTATATAACAATAATTATTAGAAAATATTATAAATGGTTTAAAAGATAAATAAATACTGATTATATA
AAGGTGATTTCATGGATTTT

Product: tRNA-dihydrouridine synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MAGITDAEFLNKVIPFGFDTATLGGYSLDAKTIEASEKIIKRGRNEFHFPQDEIVNHIEKEVNLIKKQHPNVKVSANVRS
TTPRPIIEVSNIDNLDIVEINCHCRQDEILAIGCGQNMLKRDDLAEYIGDVVDNASCEVSVKIRANVDGIDTLKIAKLIE
NTGADYLHIDAMKVGIFDADYDLLAKICSNTNIKVIGNNSIDSEQKIEKMLKTGVFGFSIARAVISGKLNFNISDF

Sequences:

>Translated_236_residues
MAGITDAEFLNKVIPFGFDTATLGGYSLDAKTIEASEKIIKRGRNEFHFPQDEIVNHIEKEVNLIKKQHPNVKVSANVRS
TTPRPIIEVSNIDNLDIVEINCHCRQDEILAIGCGQNMLKRDDLAEYIGDVVDNASCEVSVKIRANVDGIDTLKIAKLIE
NTGADYLHIDAMKVGIFDADYDLLAKICSNTNIKVIGNNSIDSEQKIEKMLKTGVFGFSIARAVISGKLNFNISDF
>Mature_235_residues
AGITDAEFLNKVIPFGFDTATLGGYSLDAKTIEASEKIIKRGRNEFHFPQDEIVNHIEKEVNLIKKQHPNVKVSANVRST
TPRPIIEVSNIDNLDIVEINCHCRQDEILAIGCGQNMLKRDDLAEYIGDVVDNASCEVSVKIRANVDGIDTLKIAKLIEN
TGADYLHIDAMKVGIFDADYDLLAKICSNTNIKVIGNNSIDSEQKIEKMLKTGVFGFSIARAVISGKLNFNISDF

Specific function: Unknown

COG id: COG0042

COG function: function code J; tRNA-dihydrouridine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005270
- InterPro:   IPR001269 [H]

Pfam domain/function: PF01207 Dus [H]

EC number: NA

Molecular weight: Translated: 26071; Mature: 25940

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGITDAEFLNKVIPFGFDTATLGGYSLDAKTIEASEKIIKRGRNEFHFPQDEIVNHIEK
CCCCCHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
EVNLIKKQHPNVKVSANVRSTTPRPIIEVSNIDNLDIVEINCHCRQDEILAIGCGQNMLK
HHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCEEEEEEEEECCCCCEEEEECCCCHHH
RDDLAEYIGDVVDNASCEVSVKIRANVDGIDTLKIAKLIENTGADYLHIDAMKVGIFDAD
HHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCC
YDLLAKICSNTNIKVIGNNSIDSEQKIEKMLKTGVFGFSIARAVISGKLNFNISDF
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEECCC
>Mature Secondary Structure 
AGITDAEFLNKVIPFGFDTATLGGYSLDAKTIEASEKIIKRGRNEFHFPQDEIVNHIEK
CCCCHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
EVNLIKKQHPNVKVSANVRSTTPRPIIEVSNIDNLDIVEINCHCRQDEILAIGCGQNMLK
HHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCEEEEEEEEECCCCCEEEEECCCCHHH
RDDLAEYIGDVVDNASCEVSVKIRANVDGIDTLKIAKLIENTGADYLHIDAMKVGIFDAD
HHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCC
YDLLAKICSNTNIKVIGNNSIDSEQKIEKMLKTGVFGFSIARAVISGKLNFNISDF
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]