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The map label for this gene is nusA [H]

Identifier: 148642966

GI number: 148642966

Start: 869655

End: 870086

Strand: Reverse

Name: nusA [H]

Synonym: Msm_0906

Alternate gene names: 148642966

Gene position: 870086-869655 (Counterclockwise)

Preceding gene: 148642967

Following gene: 148642965

Centisome position: 46.95

GC content: 32.87

Gene sequence:

>432_bases
ATGTCTATTAAATTCACTGCAAATGAAATTAGATACATAGCTCTTTTTGAAAACATGACTGGAGCAATGGTTAAAGATTG
TATTATCGATGATGAACATGGTAAAGTCACATTTGTCGTGAAAAACGGTGATATGGGATTAGCTATTGGAAAAGGCGGAA
GCACTGTTTCCAAAGTTCAAAGAGCAGTAGATAAAGGAATTGAAATCGTTGAATTGTCCGACGATTCGATTCAATTTATT
AAAAATCTTTTATCCCCTGCAGAAGTACAAGGTGTTAAAGTACTTCAGAAGGAATCAGGTGAAAAAATAGCTACTGTTAC
AGCAGATAATACCAACAAACGTATTGCTATTGGTAAAAACGGCGTTAATATCGAAAGAGCTAAGTTAATTGCAAAAAGAC
AACACAATATAAACAACATTATTTTAAAATAG

Upstream 100 bases:

>100_bases
AGAATTGGGTTCTGTCTGTGGTAAACCATTTACAGTTGCTACATTAATCGTTAACGATCCAGGAGATTCTACTATATTAG
ATGATTTGAGGTAGATTCAT

Downstream 100 bases:

>100_bases
CTATTAATTTAGCTATTTATTTTTACTTTTTTGATAATCAAATGAAAACCAGTTCGATTTTTCATTATTTTATTAAACCC
GCACACACTTTTTGAATATA

Product: transcription elongation factor NusA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSIKFTANEIRYIALFENMTGAMVKDCIIDDEHGKVTFVVKNGDMGLAIGKGGSTVSKVQRAVDKGIEIVELSDDSIQFI
KNLLSPAEVQGVKVLQKESGEKIATVTADNTNKRIAIGKNGVNIERAKLIAKRQHNINNIILK

Sequences:

>Translated_143_residues
MSIKFTANEIRYIALFENMTGAMVKDCIIDDEHGKVTFVVKNGDMGLAIGKGGSTVSKVQRAVDKGIEIVELSDDSIQFI
KNLLSPAEVQGVKVLQKESGEKIATVTADNTNKRIAIGKNGVNIERAKLIAKRQHNINNIILK
>Mature_142_residues
SIKFTANEIRYIALFENMTGAMVKDCIIDDEHGKVTFVVKNGDMGLAIGKGGSTVSKVQRAVDKGIEIVELSDDSIQFIK
NLLSPAEVQGVKVLQKESGEKIATVTADNTNKRIAIGKNGVNIERAKLIAKRQHNINNIILK

Specific function: Unknown

COG id: COG0195

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004087
- InterPro:   IPR015946
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR004044
- InterPro:   IPR010212 [H]

Pfam domain/function: PF07650 KH_2 [H]

EC number: NA

Molecular weight: Translated: 15594; Mature: 15463

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKFTANEIRYIALFENMTGAMVKDCIIDDEHGKVTFVVKNGDMGLAIGKGGSTVSKVQ
CEEEEECCCEEEEEEECCCCCHHHHHHEEECCCCEEEEEEECCCEEEEEECCCCHHHHHH
RAVDKGIEIVELSDDSIQFIKNLLSPAEVQGVKVLQKESGEKIATVTADNTNKRIAIGKN
HHHHCCCEEEEECCCHHHHHHHHCCCCHHCHHHEEECCCCCEEEEEEECCCCCEEEECCC
GVNIERAKLIAKRQHNINNIILK
CCCHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure 
SIKFTANEIRYIALFENMTGAMVKDCIIDDEHGKVTFVVKNGDMGLAIGKGGSTVSKVQ
EEEEECCCEEEEEEECCCCCHHHHHHEEECCCCEEEEEEECCCEEEEEECCCCHHHHHH
RAVDKGIEIVELSDDSIQFIKNLLSPAEVQGVKVLQKESGEKIATVTADNTNKRIAIGKN
HHHHCCCEEEEECCCHHHHHHHHCCCCHHCHHHEEECCCCCEEEEEEECCCCCEEEECCC
GVNIERAKLIAKRQHNINNIILK
CCCHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2501756 [H]