| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642898
Identifier: 148642898
GI number: 148642898
Start: 795427
End: 795687
Strand: Reverse
Name: 148642898
Synonym: Msm_0838
Alternate gene names: NA
Gene position: 795687-795427 (Counterclockwise)
Preceding gene: 148642900
Following gene: 148642897
Centisome position: 42.94
GC content: 34.87
Gene sequence:
>261_bases ATGGTAGTGAAAGTAGAAGTATTTACATCTGATAGCTGTCCTCATTGTCCGGCTGCAGTTAATGTTGCTAATGAAGCAAA AGAAGTTTTAGGTGATGCTGCGGATATTATTGTTTGTAATATTGCTTCAGAAGAAAATAGGCAAAAAGCAATTGGCCTTG GAATTATGGCTGTTCCTACAATAGCTATTAATGATGAAGTGGCATTTGTTGGTGCACCTGCTTTAGATGAACTTGTTAAT AAAGTTAAATCTTTGATTTAA
Upstream 100 bases:
>100_bases GTCCATTTGATGAATAATTTTTCTTAAAAACTTGTGCTAACAGTTATATATAAGTTTTCATAAATTATTCAATCAATTAA TTTAATAGGAGATAAAAACC
Downstream 100 bases:
>100_bases TTTTATCTTCTTTTTTTATAACTTGTAAACATGACAAATGAAAATTATACTGGAGTTACTACTGGAACTATAGCTACTGC CTGTTCTCTTGCAGCTTTGG
Product: putative thioredoxin/glutaredoxin
Products: NA
Alternate protein names: Glutaredoxin-like protein [H]
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MVVKVEVFTSDSCPHCPAAVNVANEAKEVLGDAADIIVCNIASEENRQKAIGLGIMAVPTIAINDEVAFVGAPALDELVN KVKSLI
Sequences:
>Translated_86_residues MVVKVEVFTSDSCPHCPAAVNVANEAKEVLGDAADIIVCNIASEENRQKAIGLGIMAVPTIAINDEVAFVGAPALDELVN KVKSLI >Mature_86_residues MVVKVEVFTSDSCPHCPAAVNVANEAKEVLGDAADIIVCNIASEENRQKAIGLGIMAVPTIAINDEVAFVGAPALDELVN KVKSLI
Specific function: Acts to maintain redox homeostasis; functions as a protein disulfide reductase [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR004502 - InterPro: IPR005746 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 8961; Mature: 8961
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVKVEVFTSDSCPHCPAAVNVANEAKEVLGDAADIIVCNIASEENRQKAIGLGIMAVPT CEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCEECCCE IAINDEVAFVGAPALDELVNKVKSLI EEECCCEEEEECCHHHHHHHHHHHCC >Mature Secondary Structure MVVKVEVFTSDSCPHCPAAVNVANEAKEVLGDAADIIVCNIASEENRQKAIGLGIMAVPT CEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCEECCCE IAINDEVAFVGAPALDELVNKVKSLI EEECCCEEEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]