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The map label for this gene is rps17E

Identifier: 148642893

GI number: 148642893

Start: 791722

End: 791919

Strand: Reverse

Name: rps17E

Synonym: Msm_0833

Alternate gene names: 148642893

Gene position: 791919-791722 (Counterclockwise)

Preceding gene: 148642894

Following gene: 148642892

Centisome position: 42.73

GC content: 28.79

Gene sequence:

>198_bases
ATGGGTAATATTAGAACTTCATTTGTTAAACGTTTAGCAAAAGAGCTTATAGAAACTCACAAAGGAGTCTTCACTACTGA
TTTTGACCAAAATAAAAAATTAGTTATGGAATATTCCACTGTAAGTACTAAACATTTAAGAAATAAAATCGCTGGATATG
TTACAAGACTTGTGAGATTAGAACAAACTCAAGAATAA

Upstream 100 bases:

>100_bases
GAAAAAAACCATATTGATGTTGATATTAGTAATCAAATCATGGATATGCTAACTACATTAAGTAAAAATGAGCAAAAAGA
AATTTTAAGGAGGAATGTTA

Downstream 100 bases:

>100_bases
GTCTTTTTCATTTTTTTTAATTTTTTTTATTATTATCATTATTTTGTTCAATTTTATCATTCTACTTTTTTTAATTTTAT
TCTTTTGTAACCTATTTTAA

Product: 30S ribosomal protein S17e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MGNIRTSFVKRLAKELIETHKGVFTTDFDQNKKLVMEYSTVSTKHLRNKIAGYVTRLVRLEQTQE

Sequences:

>Translated_65_residues
MGNIRTSFVKRLAKELIETHKGVFTTDFDQNKKLVMEYSTVSTKHLRNKIAGYVTRLVRLEQTQE
>Mature_64_residues
GNIRTSFVKRLAKELIETHKGVFTTDFDQNKKLVMEYSTVSTKHLRNKIAGYVTRLVRLEQTQE

Specific function: Unknown

COG id: COG1383

COG function: function code J; Ribosomal protein S17E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S17e family

Homologues:

Organism=Saccharomyces cerevisiae, GI6320655, Length=59, Percent_Identity=50.8474576271186, Blast_Score=61, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323617, Length=59, Percent_Identity=50.8474576271186, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS17E_METS3 (A5ULG0)

Other databases:

- EMBL:   CP000678
- RefSeq:   YP_001273406.1
- ProteinModelPortal:   A5ULG0
- SMR:   A5ULG0
- STRING:   A5ULG0
- GeneID:   5217262
- GenomeReviews:   CP000678_GR
- KEGG:   msi:Msm_0833
- eggNOG:   arNOG14336
- HOGENOM:   HBG460442
- OMA:   TRDFEHN
- ProtClustDB:   PRK01151
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00511
- InterPro:   IPR001210
- InterPro:   IPR018273
- Gene3D:   G3DSA:1.10.60.20
- PANTHER:   PTHR10732

Pfam domain/function: PF00833 Ribosomal_S17e

EC number: NA

Molecular weight: Translated: 7600; Mature: 7469

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS00712 RIBOSOMAL_S17E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNIRTSFVKRLAKELIETHKGVFTTDFDQNKKLVMEYSTVSTKHLRNKIAGYVTRLVRL
CCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
EQTQE
HHCCC
>Mature Secondary Structure 
GNIRTSFVKRLAKELIETHKGVFTTDFDQNKKLVMEYSTVSTKHLRNKIAGYVTRLVRL
CCHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
EQTQE
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA