| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642840
Identifier: 148642840
GI number: 148642840
Start: 741965
End: 743092
Strand: Reverse
Name: 148642840
Synonym: Msm_0780
Alternate gene names: NA
Gene position: 743092-741965 (Counterclockwise)
Preceding gene: 148642843
Following gene: 148642839
Centisome position: 40.1
GC content: 29.88
Gene sequence:
>1128_bases GTGGGAAACACATTGAAATTAATTTCAGGTTTTATTTTATTTGTAGTTGGGGTTCTCATAATATATGAGGCAAATGTTTA TAATTTGATAGACCTTTTGCTGGTTGTTGGATTTATTATTGCAATAGTTGGTATAATTATGATTATCAGCTATTTTGTTG ATGCTAATGCCGATAAAACATCTTCTATTTTTAAAGAATTTTTAGAATCTAATGATATTAAAGCTCCATCATTTAATAAA CATTCTGATAATTCTAATGGTCCTTTAAAAATTAGAGATACTTTTGACAATTATTATGAAGATGATCTTCCAGAATATGT TGAAGAAGAGTATTATGAAACATCTCCAAGTGAATTTTTTGATTTTAATCAGGAAGATGATTCTAAATCAGTTTTAAGAG TTAGCAATGACAAATCTACAACCAATTTTGGAAATAATCTTAAGTTCACTCCAAATTACGACAAACCTTTAAAGATCACT AGAAAACCTAAAAAACGTTCCCACAGCTATGCTCAATCTGAATATGATAAATCTGAAGAAATTAAAAGGGCACTACGCCA AGATGAAGATTATATAAAAAATGATACCTTTGAACCGCCTAAACCTAGAAAAATAGGCGAACCAAGAGATATCCAAATAG ATGTTAATCATCCTGAAAGTTTGCCTGTTCCTAAGTTGCTTAGAAGCTTTGTTGTTTATGATGGAGGTTTAATAACTTCC AGTGAAGCATTTGATAAACTGGCTAATGATGTACATAAAGAGATAATGCTGGAAATTCCATCATTAAATGATTTGTCTGA CAGGTTTTTATCACATGTTCCGACAGTATATTCAAGGGTAATTATCAATGATTTTGATGTATCTGATATGTCTTACATGA TTTTAGTTTCTTCACTTCTTAAACAGGGAGTACAAATTAAAACAGTTCCTCAAGTACATTCAATTAACTTAATCACAGAT GATTCTAATGCTATGATTATTTCTAAAGGTAGCAATAACAGTGATGTGGAATATGGAGCTATTTATGAAGATAGGAAATC TATTTCTGAAATCAGAACTAGCTTTGAGAAAACTTGGGATATTGCAGCAAACTTGGATGAAAATTTAGTTGCAAATTATA TACAGTAA
Upstream 100 bases:
>100_bases AAATTTCTCTTGAAAAATAGCGTTTTTATCAACATATTTATTAAGTGTATTATACAAAATTTAATTAATAGAGTGATTAT AATTATTAACAGGTGAGATA
Downstream 100 bases:
>100_bases AGGTGATTTAAATGGAAATTAGATGGTTAGGTCATTCAGCTTTTGAAATAATAACTGATGAGGGTTTAAATATTTTAATT GACCCTTTTATTAGCAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MGNTLKLISGFILFVVGVLIIYEANVYNLIDLLLVVGFIIAIVGIIMIISYFVDANADKTSSIFKEFLESNDIKAPSFNK HSDNSNGPLKIRDTFDNYYEDDLPEYVEEEYYETSPSEFFDFNQEDDSKSVLRVSNDKSTTNFGNNLKFTPNYDKPLKIT RKPKKRSHSYAQSEYDKSEEIKRALRQDEDYIKNDTFEPPKPRKIGEPRDIQIDVNHPESLPVPKLLRSFVVYDGGLITS SEAFDKLANDVHKEIMLEIPSLNDLSDRFLSHVPTVYSRVIINDFDVSDMSYMILVSSLLKQGVQIKTVPQVHSINLITD DSNAMIISKGSNNSDVEYGAIYEDRKSISEIRTSFEKTWDIAANLDENLVANYIQ
Sequences:
>Translated_375_residues MGNTLKLISGFILFVVGVLIIYEANVYNLIDLLLVVGFIIAIVGIIMIISYFVDANADKTSSIFKEFLESNDIKAPSFNK HSDNSNGPLKIRDTFDNYYEDDLPEYVEEEYYETSPSEFFDFNQEDDSKSVLRVSNDKSTTNFGNNLKFTPNYDKPLKIT RKPKKRSHSYAQSEYDKSEEIKRALRQDEDYIKNDTFEPPKPRKIGEPRDIQIDVNHPESLPVPKLLRSFVVYDGGLITS SEAFDKLANDVHKEIMLEIPSLNDLSDRFLSHVPTVYSRVIINDFDVSDMSYMILVSSLLKQGVQIKTVPQVHSINLITD DSNAMIISKGSNNSDVEYGAIYEDRKSISEIRTSFEKTWDIAANLDENLVANYIQ >Mature_374_residues GNTLKLISGFILFVVGVLIIYEANVYNLIDLLLVVGFIIAIVGIIMIISYFVDANADKTSSIFKEFLESNDIKAPSFNKH SDNSNGPLKIRDTFDNYYEDDLPEYVEEEYYETSPSEFFDFNQEDDSKSVLRVSNDKSTTNFGNNLKFTPNYDKPLKITR KPKKRSHSYAQSEYDKSEEIKRALRQDEDYIKNDTFEPPKPRKIGEPRDIQIDVNHPESLPVPKLLRSFVVYDGGLITSS EAFDKLANDVHKEIMLEIPSLNDLSDRFLSHVPTVYSRVIINDFDVSDMSYMILVSSLLKQGVQIKTVPQVHSINLITDD SNAMIISKGSNNSDVEYGAIYEDRKSISEIRTSFEKTWDIAANLDENLVANYIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42788; Mature: 42656
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNTLKLISGFILFVVGVLIIYEANVYNLIDLLLVVGFIIAIVGIIMIISYFVDANADKT CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH SSIFKEFLESNDIKAPSFNKHSDNSNGPLKIRDTFDNYYEDDLPEYVEEEYYETSPSEFF HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHCHHHHHHHHHHCCCCHHHC DFNQEDDSKSVLRVSNDKSTTNFGNNLKFTPNYDKPLKITRKPKKRSHSYAQSEYDKSEE CCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCEECCCCHHHHHHHHHHHCCHHHH IKRALRQDEDYIKNDTFEPPKPRKIGEPRDIQIDVNHPESLPVPKLLRSFVVYDGGLITS HHHHHHCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEC SEAFDKLANDVHKEIMLEIPSLNDLSDRFLSHVPTVYSRVIINDFDVSDMSYMILVSSLL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH KQGVQIKTVPQVHSINLITDDSNAMIISKGSNNSDVEYGAIYEDRKSISEIRTSFEKTWD HCCCEEEECCCEEEEEEEECCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHH IAANLDENLVANYIQ HHHCCCHHHHHHHCC >Mature Secondary Structure GNTLKLISGFILFVVGVLIIYEANVYNLIDLLLVVGFIIAIVGIIMIISYFVDANADKT CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH SSIFKEFLESNDIKAPSFNKHSDNSNGPLKIRDTFDNYYEDDLPEYVEEEYYETSPSEFF HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHCHHHHHHHHHHCCCCHHHC DFNQEDDSKSVLRVSNDKSTTNFGNNLKFTPNYDKPLKITRKPKKRSHSYAQSEYDKSEE CCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCEECCCCHHHHHHHHHHHCCHHHH IKRALRQDEDYIKNDTFEPPKPRKIGEPRDIQIDVNHPESLPVPKLLRSFVVYDGGLITS HHHHHHCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEC SEAFDKLANDVHKEIMLEIPSLNDLSDRFLSHVPTVYSRVIINDFDVSDMSYMILVSSLL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH KQGVQIKTVPQVHSINLITDDSNAMIISKGSNNSDVEYGAIYEDRKSISEIRTSFEKTWD HCCCEEEECCCEEEEEEEECCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHH IAANLDENLVANYIQ HHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA