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The map label for this gene is rpl24p

Identifier: 148642810

GI number: 148642810

Start: 716086

End: 716439

Strand: Reverse

Name: rpl24p

Synonym: Msm_0750

Alternate gene names: 148642810

Gene position: 716439-716086 (Counterclockwise)

Preceding gene: 148642811

Following gene: 148642809

Centisome position: 38.66

GC content: 35.88

Gene sequence:

>354_bases
ATGTCAAAACAACCAAGAAAACAAAGAAAAGCTCTTTACAATGCTCCTGCTCATGCACGTGGAAAACACATGAGCGCTAC
TTTAAGTAAAGACTTAAGAGCAGATATTGGTAAAAGGTCTTTACCTATTAGGAAAGGAGACAAAGTTCAAGTTCTCCGTG
GAGATTTTAAAGGACATGAAGGTGCAGTTTTAGGTGTGGACTATGGTTCATACAAAATAACTATTGAAGAAGTAACTTTA
TCAAAACCTGACGGAACTGCAGTTTTCCTTCCAGTAGATCCATCTAACGTAATGATTATTGATGCAGATATGGATGACGA
TAGAAGAATTAAAAATGTAACAGGAGACAATTAA

Upstream 100 bases:

>100_bases
TCTTAAAAGGATCTGAAGTAAGAGGTCCTGTTGCTAAAGAAGCAGCTGACAGATGGCCTAGTGTAGGTAGTGCAGCAAGT
ATTTTAGTATAGGTGAAAAA

Downstream 100 bases:

>100_bases
AATGGCTAAAATGGGATCTAGAAAACATTTAAAAACATACAAAGCACCAAAAACTTGGCCTATTCATCCTAAAGAAGATA
CCTGGACTGTCAAACCTTCA

Product: ribosomal protein L24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSKQPRKQRKALYNAPAHARGKHMSATLSKDLRADIGKRSLPIRKGDKVQVLRGDFKGHEGAVLGVDYGSYKITIEEVTL
SKPDGTAVFLPVDPSNVMIIDADMDDDRRIKNVTGDN

Sequences:

>Translated_117_residues
MSKQPRKQRKALYNAPAHARGKHMSATLSKDLRADIGKRSLPIRKGDKVQVLRGDFKGHEGAVLGVDYGSYKITIEEVTL
SKPDGTAVFLPVDPSNVMIIDADMDDDRRIKNVTGDN
>Mature_116_residues
SKQPRKQRKALYNAPAHARGKHMSATLSKDLRADIGKRSLPIRKGDKVQVLRGDFKGHEGAVLGVDYGSYKITIEEVTLS
KPDGTAVFLPVDPSNVMIIDADMDDDRRIKNVTGDN

Specific function: Located at the polypeptide exit tunnel on the outside of the subunit

COG id: COG0198

COG function: function code J; Ribosomal protein L24

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24P family

Homologues:

Organism=Homo sapiens, GI7705813, Length=104, Percent_Identity=47.1153846153846, Blast_Score=92, Evalue=1e-19,
Organism=Homo sapiens, GI4506621, Length=104, Percent_Identity=47.1153846153846, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17535693, Length=103, Percent_Identity=43.6893203883495, Blast_Score=86, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17535691, Length=94, Percent_Identity=42.5531914893617, Blast_Score=78, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32564329, Length=91, Percent_Identity=43.956043956044, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6321471, Length=104, Percent_Identity=40.3846153846154, Blast_Score=80, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6323376, Length=104, Percent_Identity=40.3846153846154, Blast_Score=80, Evalue=9e-17,
Organism=Drosophila melanogaster, GI21357853, Length=110, Percent_Identity=40, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24_METS3 (A5UL77)

Other databases:

- EMBL:   CP000678
- RefSeq:   YP_001273323.1
- ProteinModelPortal:   A5UL77
- SMR:   A5UL77
- STRING:   A5UL77
- GeneID:   5215722
- GenomeReviews:   CP000678_GR
- KEGG:   msi:Msm_0750
- eggNOG:   arNOG11456
- HOGENOM:   HBG714769
- OMA:   FLYNAPL
- ProtClustDB:   CLSK2791172
- GO:   GO:0006412
- HAMAP:   MF_01326_A
- InterPro:   IPR005824
- InterPro:   IPR005825
- InterPro:   IPR014723
- InterPro:   IPR005756
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.30.30.200
- PANTHER:   PTHR11143
- SMART:   SM00739
- TIGRFAMs:   TIGR01080

Pfam domain/function: PF00467 KOW; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 12904; Mature: 12773

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQPRKQRKALYNAPAHARGKHMSATLSKDLRADIGKRSLPIRKGDKVQVLRGDFKGHE
CCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCC
GAVLGVDYGSYKITIEEVTLSKPDGTAVFLPVDPSNVMIIDADMDDDRRIKNVTGDN
CCEEEEECCCEEEEEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCC
>Mature Secondary Structure 
SKQPRKQRKALYNAPAHARGKHMSATLSKDLRADIGKRSLPIRKGDKVQVLRGDFKGHE
CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCC
GAVLGVDYGSYKITIEEVTLSKPDGTAVFLPVDPSNVMIIDADMDDDRRIKNVTGDN
CCEEEEECCCEEEEEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA