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The map label for this gene is rpl30p

Identifier: 148642800

GI number: 148642800

Start: 711110

End: 711568

Strand: Reverse

Name: rpl30p

Synonym: Msm_0740

Alternate gene names: 148642800

Gene position: 711568-711110 (Counterclockwise)

Preceding gene: 148642801

Following gene: 148642799

Centisome position: 38.4

GC content: 33.77

Gene sequence:

>459_bases
ATGTTTTTAGTTATAAGAGTTAGAGGAACTACTGGTGTTATTAAAAACATCGCTGATACTTTAGACATGTTAAGACTTAA
CAGAATTAGCCATGCAGTTTTAGTTGAAGATACTCCAAGTTACAACGGTATGCTTCAAAAAGCTAAGGATTACATCACTT
GGGGTGAAATTGATGCAGATCTTTTAGCTGAAATTATTGCTAAAAGAGGTAAATTCACTGGTAACAACAAAGTTACTGAT
GAATATGTAGCTGAAAATTCCGATTACAAAAATATTGATGAATTAGCTAAAGCTGTAATTGCTGGCGAAGTTAAATTAAT
GGACTTAGATATTAAACCTGTATTCCGTTTACACCCTCCAAGAAAAGGATACGAAGACATCCGTCTTTCTGTTAAAGAAG
GAGGATCCTTAGGTTACAGGGGAGAAAATATTAAAGATCTTGCAGAAAGAATGCTTTAG

Upstream 100 bases:

>100_bases
GCTAATGCTATATTCGATGCTTTAAAAACTTTAAGTGCTGTTAAAGCTAGTGAAGCTGACCTTAAGAAAATGGGAGTTAA
ATATTAGACGGTGATTAAAT

Downstream 100 bases:

>100_bases
GTGTATAAGATGATTAGATCAAAACGTAAAATTAATAAACTCAGAGGTTCTAGATCCAACGGTGGAGGCTGTACCAAAAA
ACGTAGAGGTGCAGGTAACA

Product: 50S ribosomal protein L30P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MFLVIRVRGTTGVIKNIADTLDMLRLNRISHAVLVEDTPSYNGMLQKAKDYITWGEIDADLLAEIIAKRGKFTGNNKVTD
EYVAENSDYKNIDELAKAVIAGEVKLMDLDIKPVFRLHPPRKGYEDIRLSVKEGGSLGYRGENIKDLAERML

Sequences:

>Translated_152_residues
MFLVIRVRGTTGVIKNIADTLDMLRLNRISHAVLVEDTPSYNGMLQKAKDYITWGEIDADLLAEIIAKRGKFTGNNKVTD
EYVAENSDYKNIDELAKAVIAGEVKLMDLDIKPVFRLHPPRKGYEDIRLSVKEGGSLGYRGENIKDLAERML
>Mature_152_residues
MFLVIRVRGTTGVIKNIADTLDMLRLNRISHAVLVEDTPSYNGMLQKAKDYITWGEIDADLLAEIIAKRGKFTGNNKVTD
EYVAENSDYKNIDELAKAVIAGEVKLMDLDIKPVFRLHPPRKGYEDIRLSVKEGGSLGYRGENIKDLAERML

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL30_METS3 (A5UL67)

Other databases:

- EMBL:   CP000678
- RefSeq:   YP_001273313.1
- ProteinModelPortal:   A5UL67
- SMR:   A5UL67
- STRING:   A5UL67
- GeneID:   5216959
- GenomeReviews:   CP000678_GR
- KEGG:   msi:Msm_0740
- eggNOG:   arNOG07717
- HOGENOM:   HBG297538
- OMA:   DYITWGE
- ProtClustDB:   PRK06049
- GO:   GO:0006412
- HAMAP:   MF_01371_A
- InterPro:   IPR005997
- InterPro:   IPR023106
- InterPro:   IPR018038
- InterPro:   IPR016082
- Gene3D:   G3DSA:1.10.15.30
- Gene3D:   G3DSA:3.30.1390.20
- TIGRFAMs:   TIGR01309

Pfam domain/function: PF00327 Ribosomal_L30; SSF55129 Ribosomal_L30

EC number: NA

Molecular weight: Translated: 17111; Mature: 17111

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00634 RIBOSOMAL_L30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLVIRVRGTTGVIKNIADTLDMLRLNRISHAVLVEDTPSYNGMLQKAKDYITWGEIDAD
CEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCHH
LLAEIIAKRGKFTGNNKVTDEYVAENSDYKNIDELAKAVIAGEVKLMDLDIKPVFRLHPP
HHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCEEEEEECCCCCEEECCC
RKGYEDIRLSVKEGGSLGYRGENIKDLAERML
CCCHHHHEEEECCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MFLVIRVRGTTGVIKNIADTLDMLRLNRISHAVLVEDTPSYNGMLQKAKDYITWGEIDAD
CEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCHH
LLAEIIAKRGKFTGNNKVTDEYVAENSDYKNIDELAKAVIAGEVKLMDLDIKPVFRLHPP
HHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCEEEEEECCCCCEEECCC
RKGYEDIRLSVKEGGSLGYRGENIKDLAERML
CCCHHHHEEEECCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA