Click here to switch to the map view.

The map label for this gene is yhbZ [C]

Identifier: 148642775

GI number: 148642775

Start: 682355

End: 683017

Strand: Reverse

Name: yhbZ [C]

Synonym: Msm_0715

Alternate gene names: 148642775

Gene position: 683017-682355 (Counterclockwise)

Preceding gene: 148642776

Following gene: 148642774

Centisome position: 36.86

GC content: 35.9

Gene sequence:

>663_bases
ATGGGAATAGAGGAGAAAATAAAAGATATTGAGGATGAAATTCAAAAGACACCATATAACAAGGCTACTTCTCACCATAT
TGGTAAACTTAAAGCTAAACTTTCTAAATTGAAAGAGGAGTCTATTCAAAGAAGTAGTTCCGGAACAAAAGGTCAGGGAT
TTCATGTAAAGAAATCTGGTGATGCTACTGTTGTTCTTGTTGGATTTCCTTCTGTTGGTAAATCTACCCTCTTAAATGAA
CTTACTAATGCTGAAAGTAAGGTGGGAGCTTATCAGTTTACTACTTTGGACATTGTTCCAGGGGTTATGGAGTATAAAAA
CGCTAAAATACAAGTTTTTGACATTCCTGGGATTATTACCGGAGCAAGTACTGGTAAAGGTAGAGGAAGGGAAATTTTAT
CTGTAGCCAGAACAGCAGAACTGATTGTGGTTGTTTTGGATGTTTTAAATCCGCAGCATTTGGATGTTATTTTAAAAGAA
TTAAGAAATATTGGTATCAGACCAAATGAAAGGCCTCCTGATGTAACTGTAAACAGGAGAAGAACTGGTGGTGTTCATGT
GTCTTCAACAGTTCCGCTTACACATTTGGATGAAAAAACAATCAGGTCTATCATAAATGAGTATGGTATGCAAATGCAGA
CGTACTTTTTAGAGATGATGTAA

Upstream 100 bases:

>100_bases
ACTGATGGAAATATTGGTACTACTAGTCCGGACAGGGCTTAATTTTGATTAGGATATTTTAATCCTAATCTCTTTTTTTA
ATTAATAATATGGTGATTTA

Downstream 100 bases:

>100_bases
CAATGGATCAGTTTATTGATGTTCTTGATAGAAATAAATCATATGTTCCAATGTTGATTCTATTAAATAAAGTGGATCTT
GTAGATGAAGCTTATCTTGA

Product: GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MGIEEKIKDIEDEIQKTPYNKATSHHIGKLKAKLSKLKEESIQRSSSGTKGQGFHVKKSGDATVVLVGFPSVGKSTLLNE
LTNAESKVGAYQFTTLDIVPGVMEYKNAKIQVFDIPGIITGASTGKGRGREILSVARTAELIVVVLDVLNPQHLDVILKE
LRNIGIRPNERPPDVTVNRRRTGGVHVSSTVPLTHLDEKTIRSIINEYGMQMQTYFLEMM

Sequences:

>Translated_220_residues
MGIEEKIKDIEDEIQKTPYNKATSHHIGKLKAKLSKLKEESIQRSSSGTKGQGFHVKKSGDATVVLVGFPSVGKSTLLNE
LTNAESKVGAYQFTTLDIVPGVMEYKNAKIQVFDIPGIITGASTGKGRGREILSVARTAELIVVVLDVLNPQHLDVILKE
LRNIGIRPNERPPDVTVNRRRTGGVHVSSTVPLTHLDEKTIRSIINEYGMQMQTYFLEMM
>Mature_219_residues
GIEEKIKDIEDEIQKTPYNKATSHHIGKLKAKLSKLKEESIQRSSSGTKGQGFHVKKSGDATVVLVGFPSVGKSTLLNEL
TNAESKVGAYQFTTLDIVPGVMEYKNAKIQVFDIPGIITGASTGKGRGREILSVARTAELIVVVLDVLNPQHLDVILKEL
RNIGIRPNERPPDVTVNRRRTGGVHVSSTVPLTHLDEKTIRSIINEYGMQMQTYFLEMM

Specific function: Unknown

COG id: COG1163

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI4557537, Length=210, Percent_Identity=49.5238095238095, Blast_Score=212, Evalue=3e-55,
Organism=Homo sapiens, GI4758796, Length=209, Percent_Identity=51.1961722488038, Blast_Score=207, Evalue=9e-54,
Organism=Homo sapiens, GI24308117, Length=111, Percent_Identity=36.036036036036, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71981008, Length=210, Percent_Identity=51.4285714285714, Blast_Score=224, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI17555344, Length=210, Percent_Identity=50.4761904761905, Blast_Score=201, Evalue=3e-52,
Organism=Saccharomyces cerevisiae, GI6319281, Length=208, Percent_Identity=52.8846153846154, Blast_Score=213, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6321612, Length=212, Percent_Identity=49.5283018867925, Blast_Score=196, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6321962, Length=106, Percent_Identity=40.5660377358491, Blast_Score=72, Evalue=6e-14,
Organism=Drosophila melanogaster, GI21356473, Length=209, Percent_Identity=49.2822966507177, Blast_Score=220, Evalue=5e-58,
Organism=Drosophila melanogaster, GI17981711, Length=212, Percent_Identity=50.9433962264151, Blast_Score=201, Evalue=2e-52,
Organism=Drosophila melanogaster, GI20129375, Length=148, Percent_Identity=36.4864864864865, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24585318, Length=97, Percent_Identity=42.2680412371134, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006074
- InterPro:   IPR006073
- InterPro:   IPR002917
- InterPro:   IPR005225
- InterPro:   IPR004095 [H]

Pfam domain/function: PF01926 MMR_HSR1; PF02824 TGS [H]

EC number: NA

Molecular weight: Translated: 24279; Mature: 24148

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIEEKIKDIEDEIQKTPYNKATSHHIGKLKAKLSKLKEESIQRSSSGTKGQGFHVKKSG
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
DATVVLVGFPSVGKSTLLNELTNAESKVGAYQFTTLDIVPGVMEYKNAKIQVFDIPGIIT
CEEEEEEECCCCCHHHHHHHHHCHHHHCCCEEEEEHHHCCCHHHHCCCEEEEEECCCEEE
GASTGKGRGREILSVARTAELIVVVLDVLNPQHLDVILKELRNIGIRPNERPPDVTVNRR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECC
RTGGVHVSSTVPLTHLDEKTIRSIINEYGMQMQTYFLEMM
CCCCEEEECCCCCHHCCHHHHHHHHHHHCHHHHHHHHHCC
>Mature Secondary Structure 
GIEEKIKDIEDEIQKTPYNKATSHHIGKLKAKLSKLKEESIQRSSSGTKGQGFHVKKSG
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
DATVVLVGFPSVGKSTLLNELTNAESKVGAYQFTTLDIVPGVMEYKNAKIQVFDIPGIIT
CEEEEEEECCCCCHHHHHHHHHCHHHHCCCEEEEEHHHCCCHHHHCCCEEEEEECCCEEE
GASTGKGRGREILSVARTAELIVVVLDVLNPQHLDVILKELRNIGIRPNERPPDVTVNRR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECC
RTGGVHVSSTVPLTHLDEKTIRSIINEYGMQMQTYFLEMM
CCCCEEEECCCCCHHCCHHHHHHHHHHHCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]