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The map label for this gene is 148642774

Identifier: 148642774

GI number: 148642774

Start: 681924

End: 682352

Strand: Reverse

Name: 148642774

Synonym: Msm_0714

Alternate gene names: NA

Gene position: 682352-681924 (Counterclockwise)

Preceding gene: 148642775

Following gene: 148642773

Centisome position: 36.82

GC content: 31.47

Gene sequence:

>429_bases
ATGGATCAGTTTATTGATGTTCTTGATAGAAATAAATCATATGTTCCAATGTTGATTCTATTAAATAAAGTGGATCTTGT
AGATGAAGCTTATCTTGAAGAGATGAAAAAACAGCTTCCTGAATTTATACCAATTTCTGCAGATAAAAAATTAAATATAG
ATAATCTTAAGGAAACAATCTTTGAAAATTTAAACCTTGTTCGTGTTTATCTTAAACCGCAAGGAAGAAAAGCAGATATG
AACGATCCTTTAGTTATTAAAAAGGGTTCAACAGTCATTGATGCCTGTGACAAATTGCACAAGGAATTTGTGAAAAACTT
CCGTCATGCTAAAATATGGGGAACATCAGTTAAATTCCCGGGTCAGAAGGTAGGTCCTGATCATGTTTTGGAAGATGAGG
ATGTTTTAAGGATTATTCTTAAGAAATAA

Upstream 100 bases:

>100_bases
CAACAGTTCCGCTTACACATTTGGATGAAAAAACAATCAGGTCTATCATAAATGAGTATGGTATGCAAATGCAGACGTAC
TTTTTAGAGATGATGTAACA

Downstream 100 bases:

>100_bases
TTGTGGGTAATATGAATCAAGTTATTTTTATAAGTGGAACTCCATGTGTTGGAAAAACTACATTAGCTAGTGAACTTTCT
AAAAGATTGGGTGCTAATTT

Product: GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDQFIDVLDRNKSYVPMLILLNKVDLVDEAYLEEMKKQLPEFIPISADKKLNIDNLKETIFENLNLVRVYLKPQGRKADM
NDPLVIKKGSTVIDACDKLHKEFVKNFRHAKIWGTSVKFPGQKVGPDHVLEDEDVLRIILKK

Sequences:

>Translated_142_residues
MDQFIDVLDRNKSYVPMLILLNKVDLVDEAYLEEMKKQLPEFIPISADKKLNIDNLKETIFENLNLVRVYLKPQGRKADM
NDPLVIKKGSTVIDACDKLHKEFVKNFRHAKIWGTSVKFPGQKVGPDHVLEDEDVLRIILKK
>Mature_142_residues
MDQFIDVLDRNKSYVPMLILLNKVDLVDEAYLEEMKKQLPEFIPISADKKLNIDNLKETIFENLNLVRVYLKPQGRKADM
NDPLVIKKGSTVIDACDKLHKEFVKNFRHAKIWGTSVKFPGQKVGPDHVLEDEDVLRIILKK

Specific function: Unknown

COG id: COG1163

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI4758796, Length=141, Percent_Identity=43.9716312056738, Blast_Score=120, Evalue=3e-28,
Organism=Homo sapiens, GI4557537, Length=140, Percent_Identity=36.4285714285714, Blast_Score=115, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17555344, Length=143, Percent_Identity=41.2587412587413, Blast_Score=115, Evalue=9e-27,
Organism=Caenorhabditis elegans, GI71981008, Length=145, Percent_Identity=38.6206896551724, Blast_Score=108, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6319281, Length=143, Percent_Identity=40.5594405594406, Blast_Score=111, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6321612, Length=144, Percent_Identity=37.5, Blast_Score=100, Evalue=6e-23,
Organism=Drosophila melanogaster, GI17981711, Length=141, Percent_Identity=44.6808510638298, Blast_Score=121, Evalue=1e-28,
Organism=Drosophila melanogaster, GI21356473, Length=140, Percent_Identity=38.5714285714286, Blast_Score=119, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006074
- InterPro:   IPR006073
- InterPro:   IPR002917
- InterPro:   IPR005225
- InterPro:   IPR004095 [H]

Pfam domain/function: PF01926 MMR_HSR1; PF02824 TGS [H]

EC number: NA

Molecular weight: Translated: 16461; Mature: 16461

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQFIDVLDRNKSYVPMLILLNKVDLVDEAYLEEMKKQLPEFIPISADKKLNIDNLKETI
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHH
FENLNLVRVYLKPQGRKADMNDPLVIKKGSTVIDACDKLHKEFVKNFRHAKIWGTSVKFP
HCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCC
GQKVGPDHVLEDEDVLRIILKK
CCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MDQFIDVLDRNKSYVPMLILLNKVDLVDEAYLEEMKKQLPEFIPISADKKLNIDNLKETI
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHH
FENLNLVRVYLKPQGRKADMNDPLVIKKGSTVIDACDKLHKEFVKNFRHAKIWGTSVKFP
HCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCC
GQKVGPDHVLEDEDVLRIILKK
CCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]