| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642757
Identifier: 148642757
GI number: 148642757
Start: 671295
End: 671732
Strand: Reverse
Name: 148642757
Synonym: Msm_0697
Alternate gene names: NA
Gene position: 671732-671295 (Counterclockwise)
Preceding gene: 148642759
Following gene: 148642755
Centisome position: 36.25
GC content: 34.7
Gene sequence:
>438_bases ATGTTTTTCATGGTTTCTAGAAAAATTTTGATTGCTTTGGGAGTATTTGCTGTTTTAGCTATTGGAATCGCTTCGGTAGC TGCTGTGCAAAATATTGAAGTTGACGGAATAAAGTTCGCCATTCCTGATGGATATACAGAAGACATGTCCATGGCTAAAA ATGGTGAAGTGGATGAAAACGGTTTTAAAACATTTGATCATACCTATTTTGACAGTAATTACAACATGTTAAGTGTAACT GTTTTTTATGACGGGGGTAGTGTAGATTTTAACAGTCTTAAGGAACCTTCCGAGGTTGAAAAAACCATAAAAGGTCATAA GGGCTGGTTTGAATTTGATAAGGAAAGTGAACTGTACTTTTTCACATATGTTGACAATGATAAGATTGTCATGATTACTG CTGAAGACGAAGGGCTGTTTGAAAAAGTTATTGTTTAA
Upstream 100 bases:
>100_bases TGTTTTTAATTTGTTTAGAATATTTTTAAAATCAGCTTATTTTGTTTAGGAGAATATAGGTAATTATATTAATTTCCTTT TATAAATTAATATTTATTGG
Downstream 100 bases:
>100_bases GTGAGAAAGGATTTTTCTCGCTTTAATTTTATTTTTGTAGTTGTTTGTTGGTTATTATAATTTAATAACATAATTATTTA TACAGCTTATGTAACTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MFFMVSRKILIALGVFAVLAIGIASVAAVQNIEVDGIKFAIPDGYTEDMSMAKNGEVDENGFKTFDHTYFDSNYNMLSVT VFYDGGSVDFNSLKEPSEVEKTIKGHKGWFEFDKESELYFFTYVDNDKIVMITAEDEGLFEKVIV
Sequences:
>Translated_145_residues MFFMVSRKILIALGVFAVLAIGIASVAAVQNIEVDGIKFAIPDGYTEDMSMAKNGEVDENGFKTFDHTYFDSNYNMLSVT VFYDGGSVDFNSLKEPSEVEKTIKGHKGWFEFDKESELYFFTYVDNDKIVMITAEDEGLFEKVIV >Mature_145_residues MFFMVSRKILIALGVFAVLAIGIASVAAVQNIEVDGIKFAIPDGYTEDMSMAKNGEVDENGFKTFDHTYFDSNYNMLSVT VFYDGGSVDFNSLKEPSEVEKTIKGHKGWFEFDKESELYFFTYVDNDKIVMITAEDEGLFEKVIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16335; Mature: 16335
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFMVSRKILIALGVFAVLAIGIASVAAVQNIEVDGIKFAIPDGYTEDMSMAKNGEVDEN CEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEECCCCCCCCCHHCCCCCCCCC GFKTFDHTYFDSNYNMLSVTVFYDGGSVDFNSLKEPSEVEKTIKGHKGWFEFDKESELYF CCCCCCCEEECCCCCEEEEEEEECCCCCCHHCCCCHHHHHHHHCCCCCCEEECCCCCEEE FTYVDNDKIVMITAEDEGLFEKVIV EEEECCCEEEEEEECCCCCHHHHCC >Mature Secondary Structure MFFMVSRKILIALGVFAVLAIGIASVAAVQNIEVDGIKFAIPDGYTEDMSMAKNGEVDEN CEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEECCCCCCCCCHHCCCCCCCCC GFKTFDHTYFDSNYNMLSVTVFYDGGSVDFNSLKEPSEVEKTIKGHKGWFEFDKESELYF CCCCCCCEEECCCCCEEEEEEEECCCCCCHHCCCCHHHHHHHHCCCCCCEEECCCCCEEE FTYVDNDKIVMITAEDEGLFEKVIV EEEECCCEEEEEEECCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA