Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is yejH [C]

Identifier: 148642755

GI number: 148642755

Start: 667107

End: 669131

Strand: Reverse

Name: yejH [C]

Synonym: Msm_0695

Alternate gene names: 148642755

Gene position: 669131-667107 (Counterclockwise)

Preceding gene: 148642757

Following gene: 148642754

Centisome position: 36.11

GC content: 28.1

Gene sequence:

>2025_bases
ATGGTATTTAAAGATATTGATTCGGAGGTGAGTCCAAGTTATAATTCTGCACATGATGATATTGTAAATAATTTTTATAA
TTTGGTATTATCTGAGGCAATAAAATATGACCGTATATCTGGATTTTTTAATTCCACTAGTTTGGCGATTGCTGCAAGAG
GTATTGATAAATTTATAAAAAATAATGGGCATATGCGCCTTATTTGCGGCGCTAAATTGAATGTTGCTGATTTGGAATCT
ATTAACAATTCTGATGATTTGAAAAATATTATTGATATTAATTTTTTAAAAGATTATGATTCTATTGAAGATGAAATAGT
AAAGAATCATGTTAAAGTATTGGGATGGATGGTGGCTAATAATTATTTGGAAATTAAAATTGGGGTTAATCGTAAAAAGG
ATGGTTTTTATGAATCTGGAATGATACATTCTAAAATTGGGATAATGTATGATGAATTGGATGATTCAATATTATTTGAT
GGGTCTGTAAATGAAACTGCTTTCGGATGGAAAAATAATATTGAATCATTAAAAGTATTTAAAAGTTGGAAAAATCCGGA
ATTTATGGAAAATGATAAAAAAGATTTTGAAAATTTTTGGGAGGGTAACGACCCATCTTTGGAGCTGTTTGATGTTCCTG
ATGCAACAAAAAAGAAGTTAATTGAAATAGCTCCCAATTCTAAAGATGAACTTTTTAATTTAAAATTAGACTCTAAACCA
AAATTGCGTGATTATCAAGAAGAAGCTGTTGAAAATTGGATAAATAATAATTATCGCGGTATCTTTAGCATGGCTACAGG
TACGGGAAAAACATTCACTGCATTATCCTGTTGGGATTATTTACGAAATAAAAAAAATAATCTTTTAACTATCATTGTAT
GTCCTCAAAAACATTTAATAAGTCAATGGGAAAGTAATTTGAAAGAATTTGGTTTTAATGGAAGTATTCTTATTGCATCT
GGAGATAATAATAAATGGTCTTCTGAATTATTGGGTTTAATTGGGGATTTGGAGTCTTCTTTTAATTCAAATAATCAGGT
TGTAGTTTTTACCACATTTAAAACATTTGCTAGTGAAAAGTTTAGAAAAAAAATTGATTTTTTTGAGGGGGATAGTTTAG
TAATTGTAGATGAAGTTCATGGCATAGGTTCCTTTGAGTATAGGAAGAGTTTGTTGAATAAATATAATCATAGATTAGGT
TTAAGTGCAACTCCTGAAATTGAAGATGATTTTGAAAGAACTGATTTGGTCTATGATTATTTTAATGGCATAATATATGA
TTATGATTTGGAAAATGCTATTCAAAAAGGGTTTTTAACTCGTTACAATTACCATCCTATTTTTGTTGATTTAAATAATG
AAGAAATGGAGTTATATAAAGATTATACTTATAAAATTAGCATTATTTTACAAAAAAAGAAAAAAACATTGTTGGATGAA
AAACGGTTAAATACATTACTTATTAAGAGAAGAGATGTAATTAATAATGCTGAAGATAAATTTGCTCATTTACATACTTT
TTTGAAGGATCAAGAAGATATTAAGGACTTAATTATTTATTGTACTGGCAAACAATTGCCTAAAGTTCAGAATATTTTGG
ATGAATTTGATATTTCCAATCATAAATTTACTGGTGAAGAAAGCACTAAAAAAATTAATGGTAAATCTGAAAGAGACCGC
ATTTTAGAATTGTTTTCTAAGGGTTACTACCAGTCTTTAGTTGCTATTAAATGTTTGGATGAAGGAGTGGATGTTCCATC
TACTCAAACAGCATTTTTAATGGCAAGTACATTAAATTCTAGACAACATATTCAAAGAAGGGGAAGAGTATTAAGAAAAA
GTCCGGGCAAATCAAAAGCTAATATTTACGATTTAATAATTTTTCCAAAACTTAAAGGTGAATCGAATTCTGTTAAAACA
ATTTTTAAAAACGAACAGAAACGTTATGATGAATATGCTGACTTGGCAGATAATTCTTCAGAATGTAGCCAAAAATTCTT
AAAAAAATGGGAGGAAATCACATGA

Upstream 100 bases:

>100_bases
TTGTAATAGTTAATAAAATAATATTAAATTGTTTCAATTTGAAAAATTGATTCGAGTAAGGAATATTGTTTTCTTTCTAA
TTTATTTATGTGGTATTTAT

Downstream 100 bases:

>100_bases
CTAAAATAAATTTAGAAATAATTGATTATATTAGGGAAGCTGATTTTGATGAAAATTTAAAAAATTTTTTCATTTCTGCA
ATATTATATGAATTAAGAAA

Product: DNA repair helicase

Products: NA

Alternate protein names: Type III Restriction Res Subunit; DNA Repair Helicase; DNA Repair Helicase RAD; Superfamily II DNA/RNA Helicase; DNA Repair Helicase Rad; Helicase Domain-Containing Protein; Helicase Domain Protein; Type III Restriction Res Subunit Family; Helicase; DNA Repair Protein Rad; Helicase-Like; Helicase-Like Protein; DEAD/H Helicase; SNF2 Family DNA/RNA Helicase; DNA Repair Protein; DNA Repair Protein RAD; Phage DEAD Box Family Helicase; DNA-Repair Protein; DNA-Repair Helicase; Helicase DNA Repair Rad; XPB/RAD25-Related Helicase; II DNA/RNA Helicase; DNA/RNA Helicase; Type III Restriction- System Subunit Res; RAD25-Type DNA Repair Helicase; DNA Repair Related Protein; Restriction; DEAD/DEAH Box Helicase Domain-Containing Protein; DNA Helicase; Type I Site-Specific Deoxyribonuclease

Number of amino acids: Translated: 674; Mature: 674

Protein sequence:

>674_residues
MVFKDIDSEVSPSYNSAHDDIVNNFYNLVLSEAIKYDRISGFFNSTSLAIAARGIDKFIKNNGHMRLICGAKLNVADLES
INNSDDLKNIIDINFLKDYDSIEDEIVKNHVKVLGWMVANNYLEIKIGVNRKKDGFYESGMIHSKIGIMYDELDDSILFD
GSVNETAFGWKNNIESLKVFKSWKNPEFMENDKKDFENFWEGNDPSLELFDVPDATKKKLIEIAPNSKDELFNLKLDSKP
KLRDYQEEAVENWINNNYRGIFSMATGTGKTFTALSCWDYLRNKKNNLLTIIVCPQKHLISQWESNLKEFGFNGSILIAS
GDNNKWSSELLGLIGDLESSFNSNNQVVVFTTFKTFASEKFRKKIDFFEGDSLVIVDEVHGIGSFEYRKSLLNKYNHRLG
LSATPEIEDDFERTDLVYDYFNGIIYDYDLENAIQKGFLTRYNYHPIFVDLNNEEMELYKDYTYKISIILQKKKKTLLDE
KRLNTLLIKRRDVINNAEDKFAHLHTFLKDQEDIKDLIIYCTGKQLPKVQNILDEFDISNHKFTGEESTKKINGKSERDR
ILELFSKGYYQSLVAIKCLDEGVDVPSTQTAFLMASTLNSRQHIQRRGRVLRKSPGKSKANIYDLIIFPKLKGESNSVKT
IFKNEQKRYDEYADLADNSSECSQKFLKKWEEIT

Sequences:

>Translated_674_residues
MVFKDIDSEVSPSYNSAHDDIVNNFYNLVLSEAIKYDRISGFFNSTSLAIAARGIDKFIKNNGHMRLICGAKLNVADLES
INNSDDLKNIIDINFLKDYDSIEDEIVKNHVKVLGWMVANNYLEIKIGVNRKKDGFYESGMIHSKIGIMYDELDDSILFD
GSVNETAFGWKNNIESLKVFKSWKNPEFMENDKKDFENFWEGNDPSLELFDVPDATKKKLIEIAPNSKDELFNLKLDSKP
KLRDYQEEAVENWINNNYRGIFSMATGTGKTFTALSCWDYLRNKKNNLLTIIVCPQKHLISQWESNLKEFGFNGSILIAS
GDNNKWSSELLGLIGDLESSFNSNNQVVVFTTFKTFASEKFRKKIDFFEGDSLVIVDEVHGIGSFEYRKSLLNKYNHRLG
LSATPEIEDDFERTDLVYDYFNGIIYDYDLENAIQKGFLTRYNYHPIFVDLNNEEMELYKDYTYKISIILQKKKKTLLDE
KRLNTLLIKRRDVINNAEDKFAHLHTFLKDQEDIKDLIIYCTGKQLPKVQNILDEFDISNHKFTGEESTKKINGKSERDR
ILELFSKGYYQSLVAIKCLDEGVDVPSTQTAFLMASTLNSRQHIQRRGRVLRKSPGKSKANIYDLIIFPKLKGESNSVKT
IFKNEQKRYDEYADLADNSSECSQKFLKKWEEIT
>Mature_674_residues
MVFKDIDSEVSPSYNSAHDDIVNNFYNLVLSEAIKYDRISGFFNSTSLAIAARGIDKFIKNNGHMRLICGAKLNVADLES
INNSDDLKNIIDINFLKDYDSIEDEIVKNHVKVLGWMVANNYLEIKIGVNRKKDGFYESGMIHSKIGIMYDELDDSILFD
GSVNETAFGWKNNIESLKVFKSWKNPEFMENDKKDFENFWEGNDPSLELFDVPDATKKKLIEIAPNSKDELFNLKLDSKP
KLRDYQEEAVENWINNNYRGIFSMATGTGKTFTALSCWDYLRNKKNNLLTIIVCPQKHLISQWESNLKEFGFNGSILIAS
GDNNKWSSELLGLIGDLESSFNSNNQVVVFTTFKTFASEKFRKKIDFFEGDSLVIVDEVHGIGSFEYRKSLLNKYNHRLG
LSATPEIEDDFERTDLVYDYFNGIIYDYDLENAIQKGFLTRYNYHPIFVDLNNEEMELYKDYTYKISIILQKKKKTLLDE
KRLNTLLIKRRDVINNAEDKFAHLHTFLKDQEDIKDLIIYCTGKQLPKVQNILDEFDISNHKFTGEESTKKINGKSERDR
ILELFSKGYYQSLVAIKCLDEGVDVPSTQTAFLMASTLNSRQHIQRRGRVLRKSPGKSKANIYDLIIFPKLKGESNSVKT
IFKNEQKRYDEYADLADNSSECSQKFLKKWEEIT

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77954; Mature: 77954

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFKDIDSEVSPSYNSAHDDIVNNFYNLVLSEAIKYDRISGFFNSTSLAIAARGIDKFIK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEHHHHHHHHH
NNGHMRLICGAKLNVADLESINNSDDLKNIIDINFLKDYDSIEDEIVKNHVKVLGWMVAN
CCCCEEEEECCCCCHHHHHHCCCCHHHHHHHEEHHHHCHHHHHHHHHHHHHHHHHHHEEC
NYLEIKIGVNRKKDGFYESGMIHSKIGIMYDELDDSILFDGSVNETAFGWKNNIESLKVF
CEEEEEEECCCCCCCCCCCCEEHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHH
KSWKNPEFMENDKKDFENFWEGNDPSLELFDVPDATKKKLIEIAPNSKDELFNLKLDSKP
HHCCCCCHHCCCHHHHHHHCCCCCCCEEEEECCCHHHHCEEEECCCCCCCEEEEEECCCC
KLRDYQEEAVENWINNNYRGIFSMATGTGKTFTALSCWDYLRNKKNNLLTIIVCPQKHLI
CCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHHHHHHHHCCCCCEEEEEECCCHHHH
SQWESNLKEFGFNGSILIASGDNNKWSSELLGLIGDLESSFNSNNQVVVFTTFKTFASEK
HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHH
FRKKIDFFEGDSLVIVDEVHGIGSFEYRKSLLNKYNHRLGLSATPEIEDDFERTDLVYDY
HHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
FNGIIYDYDLENAIQKGFLTRYNYHPIFVDLNNEEMELYKDYTYKISIILQKKKKTLLDE
HCCEEEEECHHHHHHHCCCEEECCCEEEEEECCCHHHHEECCEEEEEEEEEHHHHHHHHH
KRLNTLLIKRRDVINNAEDKFAHLHTFLKDQEDIKDLIIYCTGKQLPKVQNILDEFDISN
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHEEEEEECCCCCHHHHHHHHHHCCCC
HKFTGEESTKKINGKSERDRILELFSKGYYQSLVAIKCLDEGVDVPSTQTAFLMASTLNS
CEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCH
RQHIQRRGRVLRKSPGKSKANIYDLIIFPKLKGESNSVKTIFKNEQKRYDEYADLADNSS
HHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
ECSQKFLKKWEEIT
HHHHHHHHHHHCCC
>Mature Secondary Structure
MVFKDIDSEVSPSYNSAHDDIVNNFYNLVLSEAIKYDRISGFFNSTSLAIAARGIDKFIK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEHHHHHHHHH
NNGHMRLICGAKLNVADLESINNSDDLKNIIDINFLKDYDSIEDEIVKNHVKVLGWMVAN
CCCCEEEEECCCCCHHHHHHCCCCHHHHHHHEEHHHHCHHHHHHHHHHHHHHHHHHHEEC
NYLEIKIGVNRKKDGFYESGMIHSKIGIMYDELDDSILFDGSVNETAFGWKNNIESLKVF
CEEEEEEECCCCCCCCCCCCEEHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHH
KSWKNPEFMENDKKDFENFWEGNDPSLELFDVPDATKKKLIEIAPNSKDELFNLKLDSKP
HHCCCCCHHCCCHHHHHHHCCCCCCCEEEEECCCHHHHCEEEECCCCCCCEEEEEECCCC
KLRDYQEEAVENWINNNYRGIFSMATGTGKTFTALSCWDYLRNKKNNLLTIIVCPQKHLI
CCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHHHHHHHHCCCCCEEEEEECCCHHHH
SQWESNLKEFGFNGSILIASGDNNKWSSELLGLIGDLESSFNSNNQVVVFTTFKTFASEK
HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHH
FRKKIDFFEGDSLVIVDEVHGIGSFEYRKSLLNKYNHRLGLSATPEIEDDFERTDLVYDY
HHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
FNGIIYDYDLENAIQKGFLTRYNYHPIFVDLNNEEMELYKDYTYKISIILQKKKKTLLDE
HCCEEEEECHHHHHHHCCCEEECCCEEEEEECCCHHHHEECCEEEEEEEEEHHHHHHHHH
KRLNTLLIKRRDVINNAEDKFAHLHTFLKDQEDIKDLIIYCTGKQLPKVQNILDEFDISN
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHEEEEEECCCCCHHHHHHHHHHCCCC
HKFTGEESTKKINGKSERDRILELFSKGYYQSLVAIKCLDEGVDVPSTQTAFLMASTLNS
CEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCH
RQHIQRRGRVLRKSPGKSKANIYDLIIFPKLKGESNSVKTIFKNEQKRYDEYADLADNSS
HHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
ECSQKFLKKWEEIT
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA