| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642709
Identifier: 148642709
GI number: 148642709
Start: 630062
End: 630961
Strand: Reverse
Name: 148642709
Synonym: Msm_0649
Alternate gene names: NA
Gene position: 630961-630062 (Counterclockwise)
Preceding gene: 148642710
Following gene: 148642706
Centisome position: 34.05
GC content: 32.11
Gene sequence:
>900_bases ATGAGTAGTTTGGATTCACCTTATGAAGTTAATGACAGTTATTACAGGGATGTCAAAAGATTTGCCAGTGAATTTTTAGA CTTTGCTCACAACTACTTTGATGATGATGAAAAAATTCTTGAAGGATTGATTGTCAGCATATATTGGAAGATGTGCTGTG ATAAATTTTCTTCTTTAGAACAAATAATTGATTATTTGGAATATATAGGTGATTTTAATGATCAGCTTCCCTATTTAAGA AAATGGGAAAATGTTGATTTTTCTCCGTATCTGGTTTTGGGGGAGTGGTTTTGTAAAAATGCACAAAAATACTTATCATC ATATACATTTAATTTAAATGATTATTTGAAAAAATATGAAGATATACCTAAATCAAAGCAAGAGGAAATATTTTTCAATA GTCCGAAAGAACTATATTATTTAAACATGCTTTGCTCTGAAATAATGGGAAGAATTTTCAGACCAGATTATGAATCAAGA AAAAGAAAAGCAATTGTCCTGCCAACATGTATGAAAATAGACCAAAAACACTGTCAGGCTGTTGAAAAAAGATTAGGTGA AGTTTGCACAGCCTGCAATCCTGAATGTGAAATAGCTAAAATAAATAATGAGTATGACTGCGAGATATATCTGGTTTCCC ATAAATCCTCAGCATTTCAAAATGCAACAGATGAAGATAAAAAAGATCTGGCTATTGTTGGAGTTGCATGCCCGTTGAAT TTAATATCTGGAGGATGGAAAGCAGCAACACTTGGAATGCCTCCACAATGCGTACTCCTTGATAAAGTGGCCTGCAGCAG GCACTGGCTTAAGGAGGATGTTCCCTCATCAATCAATAAAAAAGAGTTAAAAAAAAATATTGGAAGTAAATTAATACTTC TTAATGTTTGTATTTTTTAA
Upstream 100 bases:
>100_bases CTGAAATATGACGACTTTCCAAAAGCAGAAATTGAAATCATGTTTGATGAAGTTGAAGAGTATCATAAATTCCTGCTTGA TAGTGTAAGGGCTGATAAAA
Downstream 100 bases:
>100_bases TTAAACTTAATCCCCACTCAGTCATTGCATCTGCCTTTTCCTGAGAGTCAGATTCAGCAAAGCATCTGAAGATTGGTTCA GTACCTGATGGTCTGATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSSLDSPYEVNDSYYRDVKRFASEFLDFAHNYFDDDEKILEGLIVSIYWKMCCDKFSSLEQIIDYLEYIGDFNDQLPYLR KWENVDFSPYLVLGEWFCKNAQKYLSSYTFNLNDYLKKYEDIPKSKQEEIFFNSPKELYYLNMLCSEIMGRIFRPDYESR KRKAIVLPTCMKIDQKHCQAVEKRLGEVCTACNPECEIAKINNEYDCEIYLVSHKSSAFQNATDEDKKDLAIVGVACPLN LISGGWKAATLGMPPQCVLLDKVACSRHWLKEDVPSSINKKELKKNIGSKLILLNVCIF
Sequences:
>Translated_299_residues MSSLDSPYEVNDSYYRDVKRFASEFLDFAHNYFDDDEKILEGLIVSIYWKMCCDKFSSLEQIIDYLEYIGDFNDQLPYLR KWENVDFSPYLVLGEWFCKNAQKYLSSYTFNLNDYLKKYEDIPKSKQEEIFFNSPKELYYLNMLCSEIMGRIFRPDYESR KRKAIVLPTCMKIDQKHCQAVEKRLGEVCTACNPECEIAKINNEYDCEIYLVSHKSSAFQNATDEDKKDLAIVGVACPLN LISGGWKAATLGMPPQCVLLDKVACSRHWLKEDVPSSINKKELKKNIGSKLILLNVCIF >Mature_298_residues SSLDSPYEVNDSYYRDVKRFASEFLDFAHNYFDDDEKILEGLIVSIYWKMCCDKFSSLEQIIDYLEYIGDFNDQLPYLRK WENVDFSPYLVLGEWFCKNAQKYLSSYTFNLNDYLKKYEDIPKSKQEEIFFNSPKELYYLNMLCSEIMGRIFRPDYESRK RKAIVLPTCMKIDQKHCQAVEKRLGEVCTACNPECEIAKINNEYDCEIYLVSHKSSAFQNATDEDKKDLAIVGVACPLNL ISGGWKAATLGMPPQCVLLDKVACSRHWLKEDVPSSINKKELKKNIGSKLILLNVCIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34813; Mature: 34682
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLDSPYEVNDSYYRDVKRFASEFLDFAHNYFDDDEKILEGLIVSIYWKMCCDKFSSLE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH QIIDYLEYIGDFNDQLPYLRKWENVDFSPYLVLGEWFCKNAQKYLSSYTFNLNDYLKKYE HHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH DIPKSKQEEIFFNSPKELYYLNMLCSEIMGRIFRPDYESRKRKAIVLPTCMKIDQKHCQA HCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEECHHHHHHHHHHHHH VEKRLGEVCTACNPECEIAKINNEYDCEIYLVSHKSSAFQNATDEDKKDLAIVGVACPLN HHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCHHHCCCCCCCCCCEEEEEEECHHH LISGGWKAATLGMPPQCVLLDKVACSRHWLKEDVPSSINKKELKKNIGSKLILLNVCIF HHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEHHHHCC >Mature Secondary Structure SSLDSPYEVNDSYYRDVKRFASEFLDFAHNYFDDDEKILEGLIVSIYWKMCCDKFSSLE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH QIIDYLEYIGDFNDQLPYLRKWENVDFSPYLVLGEWFCKNAQKYLSSYTFNLNDYLKKYE HHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH DIPKSKQEEIFFNSPKELYYLNMLCSEIMGRIFRPDYESRKRKAIVLPTCMKIDQKHCQA HCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEECHHHHHHHHHHHHH VEKRLGEVCTACNPECEIAKINNEYDCEIYLVSHKSSAFQNATDEDKKDLAIVGVACPLN HHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCHHHCCCCCCCCCCEEEEEEECHHH LISGGWKAATLGMPPQCVLLDKVACSRHWLKEDVPSSINKKELKKNIGSKLILLNVCIF HHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA