| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642706
Identifier: 148642706
GI number: 148642706
Start: 627435
End: 628073
Strand: Reverse
Name: 148642706
Synonym: Msm_0646
Alternate gene names: NA
Gene position: 628073-627435 (Counterclockwise)
Preceding gene: 148642709
Following gene: 148642700
Centisome position: 33.89
GC content: 30.36
Gene sequence:
>639_bases ATGTTTGGTAACAGTGATTTAAAAAAAACAGATTTATATGCAATACTTGTTGGGATATTTTGTGCATCGTTGATTGTTTC AAATATAATTGCAAGCAAAACATTTGAATTGTATTGGGTAAGCTTGCCCTGTGCAGTTATAATATTTCCAATAATATATA TTGTTAATGATGTACTTGCAGAGTGTTACGGTTATCAGAAAGCCAGAATGGCTATTTATTTAGGATTTTTCATTAATTTA ATAGCTGTAATCTGTTATAATATAACCATGTTTTTACCGGCTCCTGCATATTTTACAGCTGATGCAGCTTTCCATACAGT TTTGGGAAGTACTTTAAGATTGCTGATAGCTAGTTTTATAGCTTATCTGGTCGGATCATTGATTAATGCAAAACTGATGG TTTATTTAAAATATAAAAATGAGGAAAAATTATTTTTCAGATGTATTGCATCTACATTTGCCGGTGAAGGAATGGATGCA ATTATATTTATTACAATAGGATTTTTAGGAACAATGCCTCTATTTGCACTTCTAACTATGATTGTGGCACAGGCATTATT CAAAACAGCTTATGAAGTTGTTGTATACCCTGTAACAAGAAAAGTAATACAAAATGTAAAAGCTTTAGATGATTATTGA
Upstream 100 bases:
>100_bases TTTATCTTGATTTTTATTTTAAAAATAGCTGATAGGTTTTTATTTTAAAATATTGTTTTGCAAAATCTTTTTTTACATCA AAAATATAATTTAAATATGT
Downstream 100 bases:
>100_bases GTTTCATACATTGAAATTAACCTTTCAACTGTATCAATATCATCTACTCCTTTGTCTTTTCTGATATTTTTAACAACAGG GAAACGCAATGAGTATCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MFGNSDLKKTDLYAILVGIFCASLIVSNIIASKTFELYWVSLPCAVIIFPIIYIVNDVLAECYGYQKARMAIYLGFFINL IAVICYNITMFLPAPAYFTADAAFHTVLGSTLRLLIASFIAYLVGSLINAKLMVYLKYKNEEKLFFRCIASTFAGEGMDA IIFITIGFLGTMPLFALLTMIVAQALFKTAYEVVVYPVTRKVIQNVKALDDY
Sequences:
>Translated_212_residues MFGNSDLKKTDLYAILVGIFCASLIVSNIIASKTFELYWVSLPCAVIIFPIIYIVNDVLAECYGYQKARMAIYLGFFINL IAVICYNITMFLPAPAYFTADAAFHTVLGSTLRLLIASFIAYLVGSLINAKLMVYLKYKNEEKLFFRCIASTFAGEGMDA IIFITIGFLGTMPLFALLTMIVAQALFKTAYEVVVYPVTRKVIQNVKALDDY >Mature_212_residues MFGNSDLKKTDLYAILVGIFCASLIVSNIIASKTFELYWVSLPCAVIIFPIIYIVNDVLAECYGYQKARMAIYLGFFINL IAVICYNITMFLPAPAYFTADAAFHTVLGSTLRLLIASFIAYLVGSLINAKLMVYLKYKNEEKLFFRCIASTFAGEGMDA IIFITIGFLGTMPLFALLTMIVAQALFKTAYEVVVYPVTRKVIQNVKALDDY
Specific function: Unknown
COG id: COG1738
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23674; Mature: 23674
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGNSDLKKTDLYAILVGIFCASLIVSNIIASKTFELYWVSLPCAVIIFPIIYIVNDVLA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHH ECYGYQKARMAIYLGFFINLIAVICYNITMFLPAPAYFTADAAFHTVLGSTLRLLIASFI HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AYLVGSLINAKLMVYLKYKNEEKLFFRCIASTFAGEGMDAIIFITIGFLGTMPLFALLTM HHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH IVAQALFKTAYEVVVYPVTRKVIQNVKALDDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFGNSDLKKTDLYAILVGIFCASLIVSNIIASKTFELYWVSLPCAVIIFPIIYIVNDVLA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHH ECYGYQKARMAIYLGFFINLIAVICYNITMFLPAPAYFTADAAFHTVLGSTLRLLIASFI HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AYLVGSLINAKLMVYLKYKNEEKLFFRCIASTFAGEGMDAIIFITIGFLGTMPLFALLTM HHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH IVAQALFKTAYEVVVYPVTRKVIQNVKALDDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA