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The map label for this gene is ef1B

Identifier: 148642662

GI number: 148642662

Start: 575323

End: 575592

Strand: Reverse

Name: ef1B

Synonym: Msm_0602

Alternate gene names: 148642662

Gene position: 575592-575323 (Counterclockwise)

Preceding gene: 148642663

Following gene: 148642660

Centisome position: 31.06

GC content: 35.56

Gene sequence:

>270_bases
ATGGGTGAAGTTGTAGCAACTTTAAAAATCATGCCAGAAAGTCCTGATGTAGATTTGGAAGCTTTAAAAGCAGCTATTCA
AGCAGCTATGCCTGCTGAAGCAGAATTCCACAAAATTGAAGAAGAACCAATTGCATTTGGTTTAGTTGCATTAAACCTTA
TTTTCATTATTGAAGATGGTGAAGGTGGAACAGAATCTACTGAAGAAGCTATGGCAAAATTAGCTGATGTAGCTAGTGTG
GAAATTACTGATACTAGAAGATTAATGTAA

Upstream 100 bases:

>100_bases
AAAAATAGCAAGATGTGAAAAATGCCGTACTTTCGGTCATGCTTATAAATGTGAATGTGGTTTTGAAGGACCATAAATAC
TTAGTAATGGAGGAATGTTG

Downstream 100 bases:

>100_bases
ATCTTCTTTTTAATTACTTTTTTTATATTCATAAAATTATTGTTGTGCATAACAACATTTATATATTATTTTTCAAAAAA
TTGAGTCTGTAAAATTTTAT

Product: elongation factor 1-beta

Products: NA

Alternate protein names: EF-1-beta; aEF-1beta

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MGEVVATLKIMPESPDVDLEALKAAIQAAMPAEAEFHKIEEEPIAFGLVALNLIFIIEDGEGGTESTEEAMAKLADVASV
EITDTRRLM

Sequences:

>Translated_89_residues
MGEVVATLKIMPESPDVDLEALKAAIQAAMPAEAEFHKIEEEPIAFGLVALNLIFIIEDGEGGTESTEEAMAKLADVASV
EITDTRRLM
>Mature_88_residues
GEVVATLKIMPESPDVDLEALKAAIQAAMPAEAEFHKIEEEPIAFGLVALNLIFIIEDGEGGTESTEEAMAKLADVASVE
ITDTRRLM

Specific function: Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA

COG id: COG2092

COG function: function code J; Translation elongation factor EF-1beta

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-1-beta/EF-1-delta family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): EF1B_METS3 (A5UKS9)

Other databases:

- EMBL:   CP000678
- RefSeq:   YP_001273175.1
- ProteinModelPortal:   A5UKS9
- SMR:   A5UKS9
- STRING:   A5UKS9
- GeneID:   5216027
- GenomeReviews:   CP000678_GR
- KEGG:   msi:Msm_0602
- eggNOG:   arNOG12647
- HOGENOM:   HBG541037
- OMA:   DEPLAFG
- ProtClustDB:   PRK00435
- HAMAP:   MF_00043
- InterPro:   IPR014717
- InterPro:   IPR004542
- InterPro:   IPR014038
- Gene3D:   G3DSA:3.30.70.60
- PIRSF:   PIRSF006521
- SMART:   SM00888
- TIGRFAMs:   TIGR00489

Pfam domain/function: PF00736 EF1_GNE; SSF54984 Transl_elong_EF1B_B/D_G_exch

EC number: NA

Molecular weight: Translated: 9544; Mature: 9413

Theoretical pI: Translated: 3.85; Mature: 3.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEVVATLKIMPESPDVDLEALKAAIQAAMPAEAEFHKIEEEPIAFGLVALNLIFIIEDG
CCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHEEEEEEEEEECC
EGGTESTEEAMAKLADVASVEITDTRRLM
CCCCCHHHHHHHHHHHHCCEEECCCCCCC
>Mature Secondary Structure 
GEVVATLKIMPESPDVDLEALKAAIQAAMPAEAEFHKIEEEPIAFGLVALNLIFIIEDG
CCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHEEEEEEEEEECC
EGGTESTEEAMAKLADVASVEITDTRRLM
CCCCCHHHHHHHHHHHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA