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The map label for this gene is slyA [C]

Identifier: 148642660

GI number: 148642660

Start: 573303

End: 573776

Strand: Reverse

Name: slyA [C]

Synonym: Msm_0600

Alternate gene names: 148642660

Gene position: 573776-573303 (Counterclockwise)

Preceding gene: 148642662

Following gene: 148642659

Centisome position: 30.96

GC content: 31.86

Gene sequence:

>474_bases
ATGTATACAACAGATGATCTTATTAAAATAAGCCCCCATATGATTTGCCATATAATAAGCCTGCATTCTTTTCATGACAT
TTTTATTAATCATTATCTTAAAGATTTTGGGATTAATAAAAATCAGTACTATATGCTGATGCATGTTTTTTATAATGAAA
GTTCAACTCAGTCAGATATTGCAACAGCCTGTTTGATGGACAGGTCTGGAGTTTCAAGAGCATTTGGTGAGCTTGAAGAA
AAAGGGATTCTGACCAGGGAATATACTGAGGAAAATAAAAGAGCTTATAAAATAGACATTACTGAAAAAGGAAAAGAATT
AGGTAAATTTTTACATGATAAGGAACTGGAATGGGAAGAGGAAATTGCACATGAACTGGAAATGTCTAGAGGAGAGTTAC
TTACAACATTGGAAAGATTAGCTTTAAAGGCATTGGAGTTTGACAGGCAAAGAATTGATAATTTTAAATATTGA

Upstream 100 bases:

>100_bases
TAAAATTTTACAGACTCAAAAAATTAAATCTGTTGATAACTAATGGGTTGATTTCAATTAACTTGTTTATGTTTATTATA
AATTTCAATGGTGTTTTTTA

Downstream 100 bases:

>100_bases
TTATTTTCTGCACCACTATTTTTTTTTAATTTTTTTGGATACATTTTTTCAATACTAGCTAAATATTCTTATTTAAATTA
AACAAAGTATAAATTGCAGT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MYTTDDLIKISPHMICHIISLHSFHDIFINHYLKDFGINKNQYYMLMHVFYNESSTQSDIATACLMDRSGVSRAFGELEE
KGILTREYTEENKRAYKIDITEKGKELGKFLHDKELEWEEEIAHELEMSRGELLTTLERLALKALEFDRQRIDNFKY

Sequences:

>Translated_157_residues
MYTTDDLIKISPHMICHIISLHSFHDIFINHYLKDFGINKNQYYMLMHVFYNESSTQSDIATACLMDRSGVSRAFGELEE
KGILTREYTEENKRAYKIDITEKGKELGKFLHDKELEWEEEIAHELEMSRGELLTTLERLALKALEFDRQRIDNFKY
>Mature_157_residues
MYTTDDLIKISPHMICHIISLHSFHDIFINHYLKDFGINKNQYYMLMHVFYNESSTQSDIATACLMDRSGVSRAFGELEE
KGILTREYTEENKRAYKIDITEKGKELGKFLHDKELEWEEEIAHELEMSRGELLTTLERLALKALEFDRQRIDNFKY

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18632; Mature: 18632

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTTDDLIKISPHMICHIISLHSFHDIFINHYLKDFGINKNQYYMLMHVFYNESSTQSDI
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHH
ATACLMDRSGVSRAFGELEEKGILTREYTEENKRAYKIDITEKGKELGKFLHDKELEWEE
HHHHHHCCCCHHHHHHHHHHCCCCCHHHHHCCCEEEEEEEHHHHHHHHHHHCCCCCCHHH
EIAHELEMSRGELLTTLERLALKALEFDRQRIDNFKY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYTTDDLIKISPHMICHIISLHSFHDIFINHYLKDFGINKNQYYMLMHVFYNESSTQSDI
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHH
ATACLMDRSGVSRAFGELEEKGILTREYTEENKRAYKIDITEKGKELGKFLHDKELEWEE
HHHHHHCCCCHHHHHHHHHHCCCCCHHHHHCCCEEEEEEEHHHHHHHHHHHCCCCCCHHH
EIAHELEMSRGELLTTLERLALKALEFDRQRIDNFKY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA