Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642589

Identifier: 148642589

GI number: 148642589

Start: 506025

End: 506711

Strand: Reverse

Name: 148642589

Synonym: Msm_0529

Alternate gene names: NA

Gene position: 506711-506025 (Counterclockwise)

Preceding gene: 148642591

Following gene: 148642588

Centisome position: 27.34

GC content: 29.55

Gene sequence:

>687_bases
ATGGATTTTCCTGCCGTGGATGAAAACTGGTACTGTGAAGACTGTGATTTAAATTTTGAATATTGTGATAAACCTGATTT
TCTTTTCTGTCCGAACTGTGGCAAAGTTTTAAAAAATGATATGTATCAATATAATTTAGATGGACTTATAGATTCTTTAA
ATAATCTGGGTAAAAGCATATGTGAAAATTGTGGTGAAGAATTTGACAAAGAATATAATTTCTGCCCATTATGTTCGGAA
AAATTAAAAAAAGAAACCATACCATTTGATATTGAAAAAGACAACTCCGTTACTGTTGACTGGAATGGTGAAAAGGCATT
GGTATATGACAAATGTGTTTATTTATCAAATCCTCATTTTGCAGTAGGCCGTATTATTAAATGCATATCATCTAAAAATT
ACACTGATGAGAAACTGGAATGTGACTTTAAAAGAATTGATGAAACTCTTCCCGAGAAACTTACTTATGATGAAGCATAT
TCCATATATGAATTAAATGGTTGGGGAAACCTTGTTCATATAGAAGAGTTCATATCCAAACTTAGTCAAGACATTTTAGA
AAGTGACCAGTTTAAACCAAACGAAAAGATAAATTATATTGAAAATGAAAGATTCAATAGGATTTTAAAACTCCGAGAAG
ACCTGTATGTTAAATTAATGATTATAGAAAGTGGAATTAATTATTAA

Upstream 100 bases:

>100_bases
TTATACATTGTTATTAAATAGGTTATATACACAAAATATAAAATACCTATAAGAAACTTTAATAAGGGAATAAATAAGAT
AGTGAGTATGGTGATAAAAT

Downstream 100 bases:

>100_bases
TCTAAATTTTTAAATAATTCATTTCCTTTTTCAGTTAATCTGTATAATCTTCTTTTTTTGAGTCTGTAAAATTTTATAGG
CTTTTTTCAAATTAATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MDFPAVDENWYCEDCDLNFEYCDKPDFLFCPNCGKVLKNDMYQYNLDGLIDSLNNLGKSICENCGEEFDKEYNFCPLCSE
KLKKETIPFDIEKDNSVTVDWNGEKALVYDKCVYLSNPHFAVGRIIKCISSKNYTDEKLECDFKRIDETLPEKLTYDEAY
SIYELNGWGNLVHIEEFISKLSQDILESDQFKPNEKINYIENERFNRILKLREDLYVKLMIIESGINY

Sequences:

>Translated_228_residues
MDFPAVDENWYCEDCDLNFEYCDKPDFLFCPNCGKVLKNDMYQYNLDGLIDSLNNLGKSICENCGEEFDKEYNFCPLCSE
KLKKETIPFDIEKDNSVTVDWNGEKALVYDKCVYLSNPHFAVGRIIKCISSKNYTDEKLECDFKRIDETLPEKLTYDEAY
SIYELNGWGNLVHIEEFISKLSQDILESDQFKPNEKINYIENERFNRILKLREDLYVKLMIIESGINY
>Mature_228_residues
MDFPAVDENWYCEDCDLNFEYCDKPDFLFCPNCGKVLKNDMYQYNLDGLIDSLNNLGKSICENCGEEFDKEYNFCPLCSE
KLKKETIPFDIEKDNSVTVDWNGEKALVYDKCVYLSNPHFAVGRIIKCISSKNYTDEKLECDFKRIDETLPEKLTYDEAY
SIYELNGWGNLVHIEEFISKLSQDILESDQFKPNEKINYIENERFNRILKLREDLYVKLMIIESGINY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26860; Mature: 26860

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFPAVDENWYCEDCDLNFEYCDKPDFLFCPNCGKVLKNDMYQYNLDGLIDSLNNLGKSI
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHEECHHHHHHHHHHHHHHH
CENCGEEFDKEYNFCPLCSEKLKKETIPFDIEKDNSVTVDWNGEKALVYDKCVYLSNPHF
HHHHHHHHHHCCCCCCHHHHHHHHCCCCCEECCCCEEEEEECCCEEEEEEEEEEECCCCH
AVGRIIKCISSKNYTDEKLECDFKRIDETLPEKLTYDEAYSIYELNGWGNLVHIEEFISK
HHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHH
LSQDILESDQFKPNEKINYIENERFNRILKLREDLYVKLMIIESGINY
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCC
>Mature Secondary Structure
MDFPAVDENWYCEDCDLNFEYCDKPDFLFCPNCGKVLKNDMYQYNLDGLIDSLNNLGKSI
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHEECHHHHHHHHHHHHHHH
CENCGEEFDKEYNFCPLCSEKLKKETIPFDIEKDNSVTVDWNGEKALVYDKCVYLSNPHF
HHHHHHHHHHCCCCCCHHHHHHHHCCCCCEECCCCEEEEEECCCEEEEEEEEEEECCCCH
AVGRIIKCISSKNYTDEKLECDFKRIDETLPEKLTYDEAYSIYELNGWGNLVHIEEFISK
HHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHH
LSQDILESDQFKPNEKINYIENERFNRILKLREDLYVKLMIIESGINY
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA