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The map label for this gene is 148642588

Identifier: 148642588

GI number: 148642588

Start: 505461

End: 505748

Strand: Reverse

Name: 148642588

Synonym: Msm_0528

Alternate gene names: NA

Gene position: 505748-505461 (Counterclockwise)

Preceding gene: 148642589

Following gene: 148642587

Centisome position: 27.29

GC content: 23.26

Gene sequence:

>288_bases
TTGATTTTTCTGAAGAAAAAAATTGATTATGAAAAAATCATTTCAGAAAGGCTTAATAAAAGCCCAAATATTGAAAATAC
TAATCAAAAACTATTTTTAGACGAAAATAATATATTTTCATATGTTAATCCAATTTGTCAAGTTTGTGGAGCTCATAAAA
TTATCAAAAAAGGCACAATAACAAAAAACAAACAAAATATCAATGGAAAAACTACAGAATTCAAAGAACAGCAATATCAA
TGCAAAAAATGTGGAAAAAAAAATTCGGAATATACAATAATCCATTAA

Upstream 100 bases:

>100_bases
TAGTAAATTACTTAAATAAGTGAGGACAAATAATGTTTTATGACCAAACAAAACAAATTTGCCCCCAATGGTAATTTAAA
CTTCATACAACTTAAACTTT

Downstream 100 bases:

>100_bases
TTGGAAAAAATAAACAATTTTTACAAGAAATAATGGATAAAATACCTGGAATAATAAAAATTGGATATCAATCACTTCGT
AAAATAAGTAAATACTTTGA

Product: IS element (transposase remnant)

Products: NA

Alternate protein names: ORFIS [H]

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MIFLKKKIDYEKIISERLNKSPNIENTNQKLFLDENNIFSYVNPICQVCGAHKIIKKGTITKNKQNINGKTTEFKEQQYQ
CKKCGKKNSEYTIIH

Sequences:

>Translated_95_residues
MIFLKKKIDYEKIISERLNKSPNIENTNQKLFLDENNIFSYVNPICQVCGAHKIIKKGTITKNKQNINGKTTEFKEQQYQ
CKKCGKKNSEYTIIH
>Mature_95_residues
MIFLKKKIDYEKIISERLNKSPNIENTNQKLFLDENNIFSYVNPICQVCGAHKIIKKGTITKNKQNINGKTTEFKEQQYQ
CKKCGKKNSEYTIIH

Specific function: This polypeptide is involved in transposition, and should therefore bind to nucleic acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11141; Mature: 11141

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFLKKKIDYEKIISERLNKSPNIENTNQKLFLDENNIFSYVNPICQVCGAHKIIKKGTI
CEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCHHHHHHCCCC
TKNKQNINGKTTEFKEQQYQCKKCGKKNSEYTIIH
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEC
>Mature Secondary Structure
MIFLKKKIDYEKIISERLNKSPNIENTNQKLFLDENNIFSYVNPICQVCGAHKIIKKGTI
CEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCHHHHHHCCCC
TKNKQNINGKTTEFKEQQYQCKKCGKKNSEYTIIH
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2993814 [H]