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The map label for this gene is 148642561

Identifier: 148642561

GI number: 148642561

Start: 473345

End: 474196

Strand: Reverse

Name: 148642561

Synonym: Msm_0501

Alternate gene names: NA

Gene position: 474196-473345 (Counterclockwise)

Preceding gene: 148642566

Following gene: 148642558

Centisome position: 25.59

GC content: 31.34

Gene sequence:

>852_bases
ATGTCTGATTTAATTTTAAAGGAAGCTATTGATAATCTCTCAGATGATGATGTAAGTGTAAGAAAGGAAGCGGTCAATGC
TTTGATTGGTGTAACTGACATTGAAGCTATTGATCCATTAATTGAAGCAACTACTGATGATAATGCTCAAATAAGATTTA
AAGCAGCTGAAATTTTAGGTAACATGGGGGAAGTTGCCAGGGATAAATTAATTGAAAAATTTGAGGCATCAGAAGGTAAA
AATAAACGTTTTTTAACATTTGCTCTTAAAGAAACTAAGGATGAAAAAGTTATTCCTTATTTTGCAGGTGCTGTAGAGGA
TGATGATTTTGGAGTAAGAAAAACAGCAATAAGGGCTTTAGGGGAGCTTCAGGCACATGATGAATTATATACAATAGCTA
AAGGACTTGAAGATGAAGACTGGGGTGTCCGTTTAGCTACTATTTATGCATTGGGGGATTTAGCTTCTGACGAATCCATT
GATTTAATTAAAGATGCAAGACGTAAGGAAAAAGATAAAGACTTTAAAAAATCATGTAACAAGGCTCTTAAAAAAGCAGA
TAAGGCTAAAAAAGCAAAAGCATCTGGTAAAACTTTATCAAAAGTAAAACCAATGAGTACAATTAAGGAAATGGAAAAAA
CCAATGTTCAAAAAGCTATTAAAGAATATGAACAGTATGTAACTGAAGAACAGCCAAAAGATGCTCCTTATAAAAGATTA
TGTATTCTTTATAGAAAGAACAATGATTTGGAAAATGAAATCAGAATTTTAAATAAGGCTATTGAAGTTTTATCTAAGAA
AAAACCGGGAAAAGAAGATTGGTTTGAAAAAAGATTAGCTAAATTAAGTTAA

Upstream 100 bases:

>100_bases
CTCAGTTATCATTTTTATCTCAACTTTTATCTTAAAGATTATATATTTACTAAAACTAATTTATTATTAATATAAGTTTT
AAACTTTTAGGAGATATAAA

Downstream 100 bases:

>100_bases
TCTTATATAAATCACTTCTTTTGTTTTTTAAAAGAGGAAGTTCTGTTCTTACTTTTTTTATTTCCTCTAAATCTATTTCT
GCTATTTCCATGTTTTCCTG

Product: phycocyanin alpha phycocyanobilin lyase, CpcE

Products: NA

Alternate protein names: HEAT Repeat-Containing Protein; Signal Transduction Protein; PBS Lyase HEAT-Like Repeat Domain Protein

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSDLILKEAIDNLSDDDVSVRKEAVNALIGVTDIEAIDPLIEATTDDNAQIRFKAAEILGNMGEVARDKLIEKFEASEGK
NKRFLTFALKETKDEKVIPYFAGAVEDDDFGVRKTAIRALGELQAHDELYTIAKGLEDEDWGVRLATIYALGDLASDESI
DLIKDARRKEKDKDFKKSCNKALKKADKAKKAKASGKTLSKVKPMSTIKEMEKTNVQKAIKEYEQYVTEEQPKDAPYKRL
CILYRKNNDLENEIRILNKAIEVLSKKKPGKEDWFEKRLAKLS

Sequences:

>Translated_283_residues
MSDLILKEAIDNLSDDDVSVRKEAVNALIGVTDIEAIDPLIEATTDDNAQIRFKAAEILGNMGEVARDKLIEKFEASEGK
NKRFLTFALKETKDEKVIPYFAGAVEDDDFGVRKTAIRALGELQAHDELYTIAKGLEDEDWGVRLATIYALGDLASDESI
DLIKDARRKEKDKDFKKSCNKALKKADKAKKAKASGKTLSKVKPMSTIKEMEKTNVQKAIKEYEQYVTEEQPKDAPYKRL
CILYRKNNDLENEIRILNKAIEVLSKKKPGKEDWFEKRLAKLS
>Mature_282_residues
SDLILKEAIDNLSDDDVSVRKEAVNALIGVTDIEAIDPLIEATTDDNAQIRFKAAEILGNMGEVARDKLIEKFEASEGKN
KRFLTFALKETKDEKVIPYFAGAVEDDDFGVRKTAIRALGELQAHDELYTIAKGLEDEDWGVRLATIYALGDLASDESID
LIKDARRKEKDKDFKKSCNKALKKADKAKKAKASGKTLSKVKPMSTIKEMEKTNVQKAIKEYEQYVTEEQPKDAPYKRLC
ILYRKNNDLENEIRILNKAIEVLSKKKPGKEDWFEKRLAKLS

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32005; Mature: 31874

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLILKEAIDNLSDDDVSVRKEAVNALIGVTDIEAIDPLIEATTDDNAQIRFKAAEILG
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHC
NMGEVARDKLIEKFEASEGKNKRFLTFALKETKDEKVIPYFAGAVEDDDFGVRKTAIRAL
CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHHHHHH
GELQAHDELYTIAKGLEDEDWGVRLATIYALGDLASDESIDLIKDARRKEKDKDFKKSCN
HHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KALKKADKAKKAKASGKTLSKVKPMSTIKEMEKTNVQKAIKEYEQYVTEEQPKDAPYKRL
HHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHE
CILYRKNNDLENEIRILNKAIEVLSKKKPGKEDWFEKRLAKLS
EEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SDLILKEAIDNLSDDDVSVRKEAVNALIGVTDIEAIDPLIEATTDDNAQIRFKAAEILG
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHC
NMGEVARDKLIEKFEASEGKNKRFLTFALKETKDEKVIPYFAGAVEDDDFGVRKTAIRAL
CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHHHHHH
GELQAHDELYTIAKGLEDEDWGVRLATIYALGDLASDESIDLIKDARRKEKDKDFKKSCN
HHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KALKKADKAKKAKASGKTLSKVKPMSTIKEMEKTNVQKAIKEYEQYVTEEQPKDAPYKRL
HHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHE
CILYRKNNDLENEIRILNKAIEVLSKKKPGKEDWFEKRLAKLS
EEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA