Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642418

Identifier: 148642418

GI number: 148642418

Start: 341462

End: 341902

Strand: Reverse

Name: 148642418

Synonym: Msm_0358

Alternate gene names: NA

Gene position: 341902-341462 (Counterclockwise)

Preceding gene: 148642419

Following gene: 148642417

Centisome position: 18.45

GC content: 34.24

Gene sequence:

>441_bases
ATGTTTATAAAGATAAGAAGAGATACATTAATAATTTTATTATTAGCATTCATCTTGATTCTTTGCGGTCGTTTAATAAC
ATATGTTGCTTATGCATCCTCTGATGAAGTTACTGATGGTGTCCCTATTTCTGGAATCATAGTTAAAGGTAATGATGTTG
TACCTGTAGATATTATTAGATCTAATGTTATGCAATCTGGTTTAAGAGACGGTAGTGTAATTCATGGAGATATTTTAAAA
ACTTCTAAAAAAGAAGTTTCACTGCAGGATGCGATACAAACGGCTCAAGAGTTTGCAAAACGGTCAACAGTTCCGGGAAC
CTCAGTTGCACCTATTTCTGCTGCAGATGTTCAGGTGGATAAAAACACAGGTATTGTTACAGTAACCGTTATTGAAGATT
TCTCGTCAGTTGAATTAAAGAATACGACAAATCAGGGTTAA

Upstream 100 bases:

>100_bases
ATATTTTAAGGAAATAATTTAAATATTACAAAATTTTAATATAATAAATGTAATTTATTTTTCTATTGCTTATTGATGGA
AAAATTTAGAGGATAAAAAC

Downstream 100 bases:

>100_bases
TAGAGGGATAGTTTGAAAAAGTGGAATATACCAATAATTTTATTTATAATATTTATGATGTGTATAAATAGTGTAGCTGC
TACTTGTAACGTAATGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MFIKIRRDTLIILLLAFILILCGRLITYVAYASSDEVTDGVPISGIIVKGNDVVPVDIIRSNVMQSGLRDGSVIHGDILK
TSKKEVSLQDAIQTAQEFAKRSTVPGTSVAPISAADVQVDKNTGIVTVTVIEDFSSVELKNTTNQG

Sequences:

>Translated_146_residues
MFIKIRRDTLIILLLAFILILCGRLITYVAYASSDEVTDGVPISGIIVKGNDVVPVDIIRSNVMQSGLRDGSVIHGDILK
TSKKEVSLQDAIQTAQEFAKRSTVPGTSVAPISAADVQVDKNTGIVTVTVIEDFSSVELKNTTNQG
>Mature_146_residues
MFIKIRRDTLIILLLAFILILCGRLITYVAYASSDEVTDGVPISGIIVKGNDVVPVDIIRSNVMQSGLRDGSVIHGDILK
TSKKEVSLQDAIQTAQEFAKRSTVPGTSVAPISAADVQVDKNTGIVTVTVIEDFSSVELKNTTNQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15659; Mature: 15659

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIKIRRDTLIILLLAFILILCGRLITYVAYASSDEVTDGVPISGIIVKGNDVVPVDIIR
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEHHHHHH
SNVMQSGLRDGSVIHGDILKTSKKEVSLQDAIQTAQEFAKRSTVPGTSVAPISAADVQVD
HHHHHHCCCCCCEEECHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
KNTGIVTVTVIEDFSSVELKNTTNQG
CCCCEEEEEEECCCCCEEECCCCCCC
>Mature Secondary Structure
MFIKIRRDTLIILLLAFILILCGRLITYVAYASSDEVTDGVPISGIIVKGNDVVPVDIIR
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEHHHHHH
SNVMQSGLRDGSVIHGDILKTSKKEVSLQDAIQTAQEFAKRSTVPGTSVAPISAADVQVD
HHHHHHCCCCCCEEECHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
KNTGIVTVTVIEDFSSVELKNTTNQG
CCCCEEEEEEECCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA