| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642416
Identifier: 148642416
GI number: 148642416
Start: 339708
End: 340142
Strand: Reverse
Name: 148642416
Synonym: Msm_0356
Alternate gene names: NA
Gene position: 340142-339708 (Counterclockwise)
Preceding gene: 148642417
Following gene: 148642414
Centisome position: 18.35
GC content: 25.75
Gene sequence:
>435_bases ATGGCATTAATCTTAATAAGAGGAGAAAACAATTCAAAACTACTAAATGCAATTGCGGACATGGAAAGACATGGAAATTT AAATTTAGCAACTAAACCAAAAATAATTGATGCAAAATTTGCTGATTCATTAGTTGAAAAGATTCTAAATTCTAAACTCA GAACAAGTTCTAAAGTTGCTACTGCCTTTTTTGTTAAAGAAGATATAACTTTAAGTATTATGCAAATTAAAAAAATTCAT CCGCCTGCTCATGTTGTAGTTGTTAGTGATGAATATGATGTGTTCAATCAATTAAAAAATAAGTTAAATAATGCTCCTGA TTTTAAAGGATATTATTCTCATAAAGCTAAAAATGGCGGAAAAATAGATTATAAACTAAAAGGAAAAGTAAAACATATTG AAAATAAGAAAATAAATAGCTATTCAAATAAATAG
Upstream 100 bases:
>100_bases TTTTAATATTGCTTGTAGTATTTAGAAGTAGATTATTGAAATCGTTCCAAAATCGGTGAAATTTTTCACCATTAATTATT TTTTTTAAAACAGTGATACT
Downstream 100 bases:
>100_bases CTACCTTTTTTTAATTTTTACAACATTACCAAGAGTACGTCCCTGTGAAGGGTTACCTGTGTATTTGCTTAAATCCAGTT CTTCTACATTTTCAATTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MALILIRGENNSKLLNAIADMERHGNLNLATKPKIIDAKFADSLVEKILNSKLRTSSKVATAFFVKEDITLSIMQIKKIH PPAHVVVVSDEYDVFNQLKNKLNNAPDFKGYYSHKAKNGGKIDYKLKGKVKHIENKKINSYSNK
Sequences:
>Translated_144_residues MALILIRGENNSKLLNAIADMERHGNLNLATKPKIIDAKFADSLVEKILNSKLRTSSKVATAFFVKEDITLSIMQIKKIH PPAHVVVVSDEYDVFNQLKNKLNNAPDFKGYYSHKAKNGGKIDYKLKGKVKHIENKKINSYSNK >Mature_143_residues ALILIRGENNSKLLNAIADMERHGNLNLATKPKIIDAKFADSLVEKILNSKLRTSSKVATAFFVKEDITLSIMQIKKIHP PAHVVVVSDEYDVFNQLKNKLNNAPDFKGYYSHKAKNGGKIDYKLKGKVKHIENKKINSYSNK
Specific function: Unknown
COG id: COG1844
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016192 - InterPro: IPR007154 [H]
Pfam domain/function: PF04009 DUF356 [H]
EC number: NA
Molecular weight: Translated: 16237; Mature: 16106
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALILIRGENNSKLLNAIADMERHGNLNLATKPKIIDAKFADSLVEKILNSKLRTSSKVA CEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCHHH TAFFVKEDITLSIMQIKKIHPPAHVVVVSDEYDVFNQLKNKLNNAPDFKGYYSHKAKNGG EEEEEECCCEEEEEEHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCC KIDYKLKGKVKHIENKKINSYSNK EEEEEECCCEEECCCCCCCCCCCC >Mature Secondary Structure ALILIRGENNSKLLNAIADMERHGNLNLATKPKIIDAKFADSLVEKILNSKLRTSSKVA EEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCHHH TAFFVKEDITLSIMQIKKIHPPAHVVVVSDEYDVFNQLKNKLNNAPDFKGYYSHKAKNGG EEEEEECCCEEEEEEHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCC KIDYKLKGKVKHIENKKINSYSNK EEEEEECCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]