Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642416

Identifier: 148642416

GI number: 148642416

Start: 339708

End: 340142

Strand: Reverse

Name: 148642416

Synonym: Msm_0356

Alternate gene names: NA

Gene position: 340142-339708 (Counterclockwise)

Preceding gene: 148642417

Following gene: 148642414

Centisome position: 18.35

GC content: 25.75

Gene sequence:

>435_bases
ATGGCATTAATCTTAATAAGAGGAGAAAACAATTCAAAACTACTAAATGCAATTGCGGACATGGAAAGACATGGAAATTT
AAATTTAGCAACTAAACCAAAAATAATTGATGCAAAATTTGCTGATTCATTAGTTGAAAAGATTCTAAATTCTAAACTCA
GAACAAGTTCTAAAGTTGCTACTGCCTTTTTTGTTAAAGAAGATATAACTTTAAGTATTATGCAAATTAAAAAAATTCAT
CCGCCTGCTCATGTTGTAGTTGTTAGTGATGAATATGATGTGTTCAATCAATTAAAAAATAAGTTAAATAATGCTCCTGA
TTTTAAAGGATATTATTCTCATAAAGCTAAAAATGGCGGAAAAATAGATTATAAACTAAAAGGAAAAGTAAAACATATTG
AAAATAAGAAAATAAATAGCTATTCAAATAAATAG

Upstream 100 bases:

>100_bases
TTTTAATATTGCTTGTAGTATTTAGAAGTAGATTATTGAAATCGTTCCAAAATCGGTGAAATTTTTCACCATTAATTATT
TTTTTTAAAACAGTGATACT

Downstream 100 bases:

>100_bases
CTACCTTTTTTTAATTTTTACAACATTACCAAGAGTACGTCCCTGTGAAGGGTTACCTGTGTATTTGCTTAAATCCAGTT
CTTCTACATTTTCAATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MALILIRGENNSKLLNAIADMERHGNLNLATKPKIIDAKFADSLVEKILNSKLRTSSKVATAFFVKEDITLSIMQIKKIH
PPAHVVVVSDEYDVFNQLKNKLNNAPDFKGYYSHKAKNGGKIDYKLKGKVKHIENKKINSYSNK

Sequences:

>Translated_144_residues
MALILIRGENNSKLLNAIADMERHGNLNLATKPKIIDAKFADSLVEKILNSKLRTSSKVATAFFVKEDITLSIMQIKKIH
PPAHVVVVSDEYDVFNQLKNKLNNAPDFKGYYSHKAKNGGKIDYKLKGKVKHIENKKINSYSNK
>Mature_143_residues
ALILIRGENNSKLLNAIADMERHGNLNLATKPKIIDAKFADSLVEKILNSKLRTSSKVATAFFVKEDITLSIMQIKKIHP
PAHVVVVSDEYDVFNQLKNKLNNAPDFKGYYSHKAKNGGKIDYKLKGKVKHIENKKINSYSNK

Specific function: Unknown

COG id: COG1844

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR007154 [H]

Pfam domain/function: PF04009 DUF356 [H]

EC number: NA

Molecular weight: Translated: 16237; Mature: 16106

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALILIRGENNSKLLNAIADMERHGNLNLATKPKIIDAKFADSLVEKILNSKLRTSSKVA
CEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCHHH
TAFFVKEDITLSIMQIKKIHPPAHVVVVSDEYDVFNQLKNKLNNAPDFKGYYSHKAKNGG
EEEEEECCCEEEEEEHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCC
KIDYKLKGKVKHIENKKINSYSNK
EEEEEECCCEEECCCCCCCCCCCC
>Mature Secondary Structure 
ALILIRGENNSKLLNAIADMERHGNLNLATKPKIIDAKFADSLVEKILNSKLRTSSKVA
EEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCHHH
TAFFVKEDITLSIMQIKKIHPPAHVVVVSDEYDVFNQLKNKLNNAPDFKGYYSHKAKNGG
EEEEEECCCEEEEEEHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCC
KIDYKLKGKVKHIENKKINSYSNK
EEEEEECCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]