Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642413

Identifier: 148642413

GI number: 148642413

Start: 336587

End: 337288

Strand: Reverse

Name: 148642413

Synonym: Msm_0353

Alternate gene names: NA

Gene position: 337288-336587 (Counterclockwise)

Preceding gene: 148642414

Following gene: 148642412

Centisome position: 18.2

GC content: 30.91

Gene sequence:

>702_bases
ATGCCTTACGGAACAATTCAGGATGTAAGCACATCTCAAAGTATTGTAGCAAAAATATTGAATGTCGGAACAGTTTCGGT
TTATAGTGCTTATGACAACAATCAGATGAAATTAGCCAATATTTCAAATGTTAAGGAAGTTGAAAATATAATATTTTCAA
GAATATCCAATCAGAATAATCTAAGAAGCAGACATTATAGAGATGATTTTTCTATAAACAGACAGCAGCCTGAATATTAT
TCTGATGATGAATACTATGAACCATCTAATGACTACCGCTCAAAAAGAAGACAGTATGAGGATGGCGGTTATTATGGTGA
AGATGAATATTATGAGCCTCAGGATTATTACAGAAAAGAACCTGTTAGGGATTATGAATATTATCCTGAAGAATTGAACT
TTGAAGAGGAAAAAAGGCATAATTATGAATATGAACCTTACATGAAAGATTCTTTGGAAGACAATATTGAAGGTGCTGTT
AACAATAGGGGTAATGGACTTCATGATAATGACTATTATAATGAAAGTACTGATGATTATTCTTATAGTGATGATGATTA
CTATGGGGAAAATGAAGCTGAACTTTATTATAATGATCAGGACATTCAGGATTCAAAATTTGAAGAAAATGATATAGGTA
CCCAAACAAAAGACTCTAAAGAAACTATCATCAGAAGACATTTCGACAAATTTAAAAAATAA

Upstream 100 bases:

>100_bases
ATAATCTGGCAACTTATTAACTGGTATTATATGGAGTATATTTTAACTGACTCAAGAATTATTATTAAATCAGGAGTTTT
ATACACTAAAAAAAAACTAC

Downstream 100 bases:

>100_bases
TTTTTTTTTAAAAAATCAGGTGAAGTTAATGGAATTACTATGTATACAATCTCAGGAACATGACAAATTACCTCTTGCAG
AACTAAAAGCAGTTATTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MPYGTIQDVSTSQSIVAKILNVGTVSVYSAYDNNQMKLANISNVKEVENIIFSRISNQNNLRSRHYRDDFSINRQQPEYY
SDDEYYEPSNDYRSKRRQYEDGGYYGEDEYYEPQDYYRKEPVRDYEYYPEELNFEEEKRHNYEYEPYMKDSLEDNIEGAV
NNRGNGLHDNDYYNESTDDYSYSDDDYYGENEAELYYNDQDIQDSKFEENDIGTQTKDSKETIIRRHFDKFKK

Sequences:

>Translated_233_residues
MPYGTIQDVSTSQSIVAKILNVGTVSVYSAYDNNQMKLANISNVKEVENIIFSRISNQNNLRSRHYRDDFSINRQQPEYY
SDDEYYEPSNDYRSKRRQYEDGGYYGEDEYYEPQDYYRKEPVRDYEYYPEELNFEEEKRHNYEYEPYMKDSLEDNIEGAV
NNRGNGLHDNDYYNESTDDYSYSDDDYYGENEAELYYNDQDIQDSKFEENDIGTQTKDSKETIIRRHFDKFKK
>Mature_232_residues
PYGTIQDVSTSQSIVAKILNVGTVSVYSAYDNNQMKLANISNVKEVENIIFSRISNQNNLRSRHYRDDFSINRQQPEYYS
DDEYYEPSNDYRSKRRQYEDGGYYGEDEYYEPQDYYRKEPVRDYEYYPEELNFEEEKRHNYEYEPYMKDSLEDNIEGAVN
NRGNGLHDNDYYNESTDDYSYSDDDYYGENEAELYYNDQDIQDSKFEENDIGTQTKDSKETIIRRHFDKFKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28113; Mature: 27982

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYGTIQDVSTSQSIVAKILNVGTVSVYSAYDNNQMKLANISNVKEVENIIFSRISNQNN
CCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCC
LRSRHYRDDFSINRQQPEYYSDDEYYEPSNDYRSKRRQYEDGGYYGEDEYYEPQDYYRKE
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCC
PVRDYEYYPEELNFEEEKRHNYEYEPYMKDSLEDNIEGAVNNRGNGLHDNDYYNESTDDY
CCCHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
SYSDDDYYGENEAELYYNDQDIQDSKFEENDIGTQTKDSKETIIRRHFDKFKK
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PYGTIQDVSTSQSIVAKILNVGTVSVYSAYDNNQMKLANISNVKEVENIIFSRISNQNN
CCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCC
LRSRHYRDDFSINRQQPEYYSDDEYYEPSNDYRSKRRQYEDGGYYGEDEYYEPQDYYRKE
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCC
PVRDYEYYPEELNFEEEKRHNYEYEPYMKDSLEDNIEGAVNNRGNGLHDNDYYNESTDDY
CCCHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
SYSDDDYYGENEAELYYNDQDIQDSKFEENDIGTQTKDSKETIIRRHFDKFKK
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA