Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

Click here to switch to the map view.

The map label for this gene is 148642383

Identifier: 148642383

GI number: 148642383

Start: 307521

End: 307790

Strand: Reverse

Name: 148642383

Synonym: Msm_0323

Alternate gene names: NA

Gene position: 307790-307521 (Counterclockwise)

Preceding gene: 148642384

Following gene: 148642382

Centisome position: 16.61

GC content: 27.41

Gene sequence:

>270_bases
ATGGAATTTGTTGTATCAATTATTGCAATAGCTTTAATGTTAATCGGAGCATTTGGAGTAATATTATTGAAAAAACCATT
AGACAAAGTAATTATGTTTTCCATAATGGATGCAGGTTTTTTACTTGTTGTGGTGCTATTTAGATATTTGGATGTTGCAA
TGTTTGTTGCATTGTCTGATCCTTTATGTACTTTAATTTTTATTATGGCTATTGTTAAAATTAAAGAAATTAGACAAAGA
AAAGTTAAAAGTGGTGAGTTACATGATTGA

Upstream 100 bases:

>100_bases
TGCTGCTGCATTTTTCATATGTTCTACAATTAGTGCTAATGCTATTGCAACAAGTTTGGATAAGCTTGATGATGAAATAA
TTCTTGATTGAGGCGTTGAA

Downstream 100 bases:

>100_bases
TGTTAATCTGTTCTTTTATGTTGGTATTTTTCTAGCTATTGTAGGTAGTTTAGCTACTGCATGGGGTCCAGGTGTAAAAG
ACCCTATTATAAGAACATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MEFVVSIIAIALMLIGAFGVILLKKPLDKVIMFSIMDAGFLLVVVLFRYLDVAMFVALSDPLCTLIFIMAIVKIKEIRQR
KVKSGELHD

Sequences:

>Translated_89_residues
MEFVVSIIAIALMLIGAFGVILLKKPLDKVIMFSIMDAGFLLVVVLFRYLDVAMFVALSDPLCTLIFIMAIVKIKEIRQR
KVKSGELHD
>Mature_89_residues
MEFVVSIIAIALMLIGAFGVILLKKPLDKVIMFSIMDAGFLLVVVLFRYLDVAMFVALSDPLCTLIFIMAIVKIKEIRQR
KVKSGELHD

Specific function: Unknown

COG id: COG4039

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9985; Mature: 9985

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFVVSIIAIALMLIGAFGVILLKKPLDKVIMFSIMDAGFLLVVVLFRYLDVAMFVALSD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLCTLIFIMAIVKIKEIRQRKVKSGELHD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEFVVSIIAIALMLIGAFGVILLKKPLDKVIMFSIMDAGFLLVVVLFRYLDVAMFVALSD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLCTLIFIMAIVKIKEIRQRKVKSGELHD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA