Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642369

Identifier: 148642369

GI number: 148642369

Start: 298164

End: 299210

Strand: Reverse

Name: 148642369

Synonym: Msm_0309

Alternate gene names: NA

Gene position: 299210-298164 (Counterclockwise)

Preceding gene: 148642370

Following gene: 148642368

Centisome position: 16.15

GC content: 27.51

Gene sequence:

>1047_bases
GTGTTTGAAAAATCATTTATTACAGACTGTGAAGGTCCATTAACTTTAAATGACAATGCTTTTGAGTTATGTGCACATTT
CATTGAGGATGGAGATGAATTATTTAAAATTCTTAGTTTATATGATGATTATCTTGTAGATGAAGTTAAAAAAGATAATT
ATAAAGCAGGCAACACACTGAAATTAATCTTGCCCTTTTTTGCTGTTGAAAATCTTAAAAATGAAGATTTGATTAATTTT
TCACGGGAACATATCTATGTAGTTAACGATTCAAGATTTCTATTAAAATACCTTCAAAGTGCTATGAATACTTACATAGT
TAGTACTAGCTATGGTCAATATATTGAAGCAGTATCTAATTTTATGGAATTTCCATTTGAAAACACATATTATACTGATG
TTGATATGGATGAGTTAAATCTTATTGATGAAGAAATACTTAAAATTGCTGAATTTAAAAAGCAGATACTGGAAAATCCT
AAAAATTATGAGCTGTTCGATGATATTTTCTTCAGTGAAATTCCTAAAATGGGGATTTATGAAAATATTAAAAATATTGA
TGTTATTGGCGGTGAAGGTAAAAAATTAGCTATTGATGACATAATATCTCGTGACAATATCAATATTAATGAAATTCTCT
ATATTGGAGACAGCATTACGGATGTTGAACCATTGAGATTTGCCCGTGAGCATGATGGAATCAGTATATCTTTTAACGGT
AATGATTATCCGTTAAGGGAAGCTCAAATAGCTATCGTATCTCCAAGTGCAATTGCAACAGCAGTAATAGCTAATATTTA
TGCTAACAATGATAAAAAAGCAGTTTTAACTTTTATTGATGATTATAATAATTCAGATAATATTAAAAAGTTATTTGAAG
ATTATAAAATTGATTCACAAATTAATGAAGAATTTTTTAGAATATTTAAAAATATTAAATATCCACTTATTAAAATAGTT
GATTCGGATAATTTTGAAGATATATTGAAAGAAAGTATTGAAATGAGAAATCGTATCCGTGGCGAAGACGTTGGTGGATT
AGGTTAA

Upstream 100 bases:

>100_bases
GATAAAGTTACTTTTAATGAGGAAAACTGTATTTATTGCAGACAATGTGAGGCAATTTGTCCTGTAACTGCAATAAAATT
AGTTAATTTCAGGTGATTAT

Downstream 100 bases:

>100_bases
TAATTATTAAGAAGGTAATATGATGAGTTATGAAAAAGTAGAAAATACATTTTTTGAAGCTTTTGAAGGCCAATATGTAA
GAGCTTTAATAACCGGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MFEKSFITDCEGPLTLNDNAFELCAHFIEDGDELFKILSLYDDYLVDEVKKDNYKAGNTLKLILPFFAVENLKNEDLINF
SREHIYVVNDSRFLLKYLQSAMNTYIVSTSYGQYIEAVSNFMEFPFENTYYTDVDMDELNLIDEEILKIAEFKKQILENP
KNYELFDDIFFSEIPKMGIYENIKNIDVIGGEGKKLAIDDIISRDNININEILYIGDSITDVEPLRFAREHDGISISFNG
NDYPLREAQIAIVSPSAIATAVIANIYANNDKKAVLTFIDDYNNSDNIKKLFEDYKIDSQINEEFFRIFKNIKYPLIKIV
DSDNFEDILKESIEMRNRIRGEDVGGLG

Sequences:

>Translated_348_residues
MFEKSFITDCEGPLTLNDNAFELCAHFIEDGDELFKILSLYDDYLVDEVKKDNYKAGNTLKLILPFFAVENLKNEDLINF
SREHIYVVNDSRFLLKYLQSAMNTYIVSTSYGQYIEAVSNFMEFPFENTYYTDVDMDELNLIDEEILKIAEFKKQILENP
KNYELFDDIFFSEIPKMGIYENIKNIDVIGGEGKKLAIDDIISRDNININEILYIGDSITDVEPLRFAREHDGISISFNG
NDYPLREAQIAIVSPSAIATAVIANIYANNDKKAVLTFIDDYNNSDNIKKLFEDYKIDSQINEEFFRIFKNIKYPLIKIV
DSDNFEDILKESIEMRNRIRGEDVGGLG
>Mature_348_residues
MFEKSFITDCEGPLTLNDNAFELCAHFIEDGDELFKILSLYDDYLVDEVKKDNYKAGNTLKLILPFFAVENLKNEDLINF
SREHIYVVNDSRFLLKYLQSAMNTYIVSTSYGQYIEAVSNFMEFPFENTYYTDVDMDELNLIDEEILKIAEFKKQILENP
KNYELFDDIFFSEIPKMGIYENIKNIDVIGGEGKKLAIDDIISRDNININEILYIGDSITDVEPLRFAREHDGISISFNG
NDYPLREAQIAIVSPSAIATAVIANIYANNDKKAVLTFIDDYNNSDNIKKLFEDYKIDSQINEEFFRIFKNIKYPLIKIV
DSDNFEDILKESIEMRNRIRGEDVGGLG

Specific function: Unknown

COG id: COG4030

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40233; Mature: 40233

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEKSFITDCEGPLTLNDNAFELCAHFIEDGDELFKILSLYDDYLVDEVKKDNYKAGNTL
CCCCCCCCCCCCCEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
KLILPFFAVENLKNEDLINFSREHIYVVNDSRFLLKYLQSAMNTYIVSTSYGQYIEAVSN
HHHHHHHHHHCCCCCCHHCCCCCEEEEECCCHHHHHHHHHHHHHEEEECCHHHHHHHHHH
FMEFPFENTYYTDVDMDELNLIDEEILKIAEFKKQILENPKNYELFDDIFFSEIPKMGIY
HHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHH
ENIKNIDVIGGEGKKLAIDDIISRDNININEILYIGDSITDVEPLRFAREHDGISISFNG
HCCCCEEEECCCCCEEEHHHHHCCCCCCHHEEEEECCCCCCCHHHHHHHHCCCEEEEECC
NDYPLREAQIAIVSPSAIATAVIANIYANNDKKAVLTFIDDYNNSDNIKKLFEDYKIDSQ
CCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCHH
INEEFFRIFKNIKYPLIKIVDSDNFEDILKESIEMRNRIRGEDVGGLG
HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFEKSFITDCEGPLTLNDNAFELCAHFIEDGDELFKILSLYDDYLVDEVKKDNYKAGNTL
CCCCCCCCCCCCCEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
KLILPFFAVENLKNEDLINFSREHIYVVNDSRFLLKYLQSAMNTYIVSTSYGQYIEAVSN
HHHHHHHHHHCCCCCCHHCCCCCEEEEECCCHHHHHHHHHHHHHEEEECCHHHHHHHHHH
FMEFPFENTYYTDVDMDELNLIDEEILKIAEFKKQILENPKNYELFDDIFFSEIPKMGIY
HHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHH
ENIKNIDVIGGEGKKLAIDDIISRDNININEILYIGDSITDVEPLRFAREHDGISISFNG
HCCCCEEEECCCCCEEEHHHHHCCCCCCHHEEEEECCCCCCCHHHHHHHHCCCEEEEECC
NDYPLREAQIAIVSPSAIATAVIANIYANNDKKAVLTFIDDYNNSDNIKKLFEDYKIDSQ
CCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCHH
INEEFFRIFKNIKYPLIKIVDSDNFEDILKESIEMRNRIRGEDVGGLG
HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA