| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642369
Identifier: 148642369
GI number: 148642369
Start: 298164
End: 299210
Strand: Reverse
Name: 148642369
Synonym: Msm_0309
Alternate gene names: NA
Gene position: 299210-298164 (Counterclockwise)
Preceding gene: 148642370
Following gene: 148642368
Centisome position: 16.15
GC content: 27.51
Gene sequence:
>1047_bases GTGTTTGAAAAATCATTTATTACAGACTGTGAAGGTCCATTAACTTTAAATGACAATGCTTTTGAGTTATGTGCACATTT CATTGAGGATGGAGATGAATTATTTAAAATTCTTAGTTTATATGATGATTATCTTGTAGATGAAGTTAAAAAAGATAATT ATAAAGCAGGCAACACACTGAAATTAATCTTGCCCTTTTTTGCTGTTGAAAATCTTAAAAATGAAGATTTGATTAATTTT TCACGGGAACATATCTATGTAGTTAACGATTCAAGATTTCTATTAAAATACCTTCAAAGTGCTATGAATACTTACATAGT TAGTACTAGCTATGGTCAATATATTGAAGCAGTATCTAATTTTATGGAATTTCCATTTGAAAACACATATTATACTGATG TTGATATGGATGAGTTAAATCTTATTGATGAAGAAATACTTAAAATTGCTGAATTTAAAAAGCAGATACTGGAAAATCCT AAAAATTATGAGCTGTTCGATGATATTTTCTTCAGTGAAATTCCTAAAATGGGGATTTATGAAAATATTAAAAATATTGA TGTTATTGGCGGTGAAGGTAAAAAATTAGCTATTGATGACATAATATCTCGTGACAATATCAATATTAATGAAATTCTCT ATATTGGAGACAGCATTACGGATGTTGAACCATTGAGATTTGCCCGTGAGCATGATGGAATCAGTATATCTTTTAACGGT AATGATTATCCGTTAAGGGAAGCTCAAATAGCTATCGTATCTCCAAGTGCAATTGCAACAGCAGTAATAGCTAATATTTA TGCTAACAATGATAAAAAAGCAGTTTTAACTTTTATTGATGATTATAATAATTCAGATAATATTAAAAAGTTATTTGAAG ATTATAAAATTGATTCACAAATTAATGAAGAATTTTTTAGAATATTTAAAAATATTAAATATCCACTTATTAAAATAGTT GATTCGGATAATTTTGAAGATATATTGAAAGAAAGTATTGAAATGAGAAATCGTATCCGTGGCGAAGACGTTGGTGGATT AGGTTAA
Upstream 100 bases:
>100_bases GATAAAGTTACTTTTAATGAGGAAAACTGTATTTATTGCAGACAATGTGAGGCAATTTGTCCTGTAACTGCAATAAAATT AGTTAATTTCAGGTGATTAT
Downstream 100 bases:
>100_bases TAATTATTAAGAAGGTAATATGATGAGTTATGAAAAAGTAGAAAATACATTTTTTGAAGCTTTTGAAGGCCAATATGTAA GAGCTTTAATAACCGGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MFEKSFITDCEGPLTLNDNAFELCAHFIEDGDELFKILSLYDDYLVDEVKKDNYKAGNTLKLILPFFAVENLKNEDLINF SREHIYVVNDSRFLLKYLQSAMNTYIVSTSYGQYIEAVSNFMEFPFENTYYTDVDMDELNLIDEEILKIAEFKKQILENP KNYELFDDIFFSEIPKMGIYENIKNIDVIGGEGKKLAIDDIISRDNININEILYIGDSITDVEPLRFAREHDGISISFNG NDYPLREAQIAIVSPSAIATAVIANIYANNDKKAVLTFIDDYNNSDNIKKLFEDYKIDSQINEEFFRIFKNIKYPLIKIV DSDNFEDILKESIEMRNRIRGEDVGGLG
Sequences:
>Translated_348_residues MFEKSFITDCEGPLTLNDNAFELCAHFIEDGDELFKILSLYDDYLVDEVKKDNYKAGNTLKLILPFFAVENLKNEDLINF SREHIYVVNDSRFLLKYLQSAMNTYIVSTSYGQYIEAVSNFMEFPFENTYYTDVDMDELNLIDEEILKIAEFKKQILENP KNYELFDDIFFSEIPKMGIYENIKNIDVIGGEGKKLAIDDIISRDNININEILYIGDSITDVEPLRFAREHDGISISFNG NDYPLREAQIAIVSPSAIATAVIANIYANNDKKAVLTFIDDYNNSDNIKKLFEDYKIDSQINEEFFRIFKNIKYPLIKIV DSDNFEDILKESIEMRNRIRGEDVGGLG >Mature_348_residues MFEKSFITDCEGPLTLNDNAFELCAHFIEDGDELFKILSLYDDYLVDEVKKDNYKAGNTLKLILPFFAVENLKNEDLINF SREHIYVVNDSRFLLKYLQSAMNTYIVSTSYGQYIEAVSNFMEFPFENTYYTDVDMDELNLIDEEILKIAEFKKQILENP KNYELFDDIFFSEIPKMGIYENIKNIDVIGGEGKKLAIDDIISRDNININEILYIGDSITDVEPLRFAREHDGISISFNG NDYPLREAQIAIVSPSAIATAVIANIYANNDKKAVLTFIDDYNNSDNIKKLFEDYKIDSQINEEFFRIFKNIKYPLIKIV DSDNFEDILKESIEMRNRIRGEDVGGLG
Specific function: Unknown
COG id: COG4030
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40233; Mature: 40233
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEKSFITDCEGPLTLNDNAFELCAHFIEDGDELFKILSLYDDYLVDEVKKDNYKAGNTL CCCCCCCCCCCCCEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH KLILPFFAVENLKNEDLINFSREHIYVVNDSRFLLKYLQSAMNTYIVSTSYGQYIEAVSN HHHHHHHHHHCCCCCCHHCCCCCEEEEECCCHHHHHHHHHHHHHEEEECCHHHHHHHHHH FMEFPFENTYYTDVDMDELNLIDEEILKIAEFKKQILENPKNYELFDDIFFSEIPKMGIY HHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHH ENIKNIDVIGGEGKKLAIDDIISRDNININEILYIGDSITDVEPLRFAREHDGISISFNG HCCCCEEEECCCCCEEEHHHHHCCCCCCHHEEEEECCCCCCCHHHHHHHHCCCEEEEECC NDYPLREAQIAIVSPSAIATAVIANIYANNDKKAVLTFIDDYNNSDNIKKLFEDYKIDSQ CCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCHH INEEFFRIFKNIKYPLIKIVDSDNFEDILKESIEMRNRIRGEDVGGLG HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MFEKSFITDCEGPLTLNDNAFELCAHFIEDGDELFKILSLYDDYLVDEVKKDNYKAGNTL CCCCCCCCCCCCCEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH KLILPFFAVENLKNEDLINFSREHIYVVNDSRFLLKYLQSAMNTYIVSTSYGQYIEAVSN HHHHHHHHHHCCCCCCHHCCCCCEEEEECCCHHHHHHHHHHHHHEEEECCHHHHHHHHHH FMEFPFENTYYTDVDMDELNLIDEEILKIAEFKKQILENPKNYELFDDIFFSEIPKMGIY HHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHH ENIKNIDVIGGEGKKLAIDDIISRDNININEILYIGDSITDVEPLRFAREHDGISISFNG HCCCCEEEECCCCCEEEHHHHHCCCCCCHHEEEEECCCCCCCHHHHHHHHCCCEEEEECC NDYPLREAQIAIVSPSAIATAVIANIYANNDKKAVLTFIDDYNNSDNIKKLFEDYKIDSQ CCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCHH INEEFFRIFKNIKYPLIKIVDSDNFEDILKESIEMRNRIRGEDVGGLG HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA