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The map label for this gene is rpoE2 [H]

Identifier: 148642256

GI number: 148642256

Start: 189913

End: 190089

Strand: Reverse

Name: rpoE2 [H]

Synonym: Msm_0196

Alternate gene names: 148642256

Gene position: 190089-189913 (Counterclockwise)

Preceding gene: 148642257

Following gene: 148642255

Centisome position: 10.26

GC content: 32.77

Gene sequence:

>177_bases
ATGAATGCATGTACAGTTTGTAAATATATTACTAATAAAGAACGTTGTCCAGTCTGCGGTAACCCAACTTCAGATAACTG
GAGCGGTCTTTTAATAATTACAAAACCTGAAGAATCTGAGTTAGCTAATGAATTAAATATAGATTTAGCTGGCGAATATT
GTTTAAGAGTAAGGTAG

Upstream 100 bases:

>100_bases
CTACCAAAAATACTAAAATAGGTCTTACCATGAGACAAAATAATTTAGGTAGATTTGAATGGATTGAAGAAGCTAAAAAT
AAAAATAAGAAGGCTAAATC

Downstream 100 bases:

>100_bases
AAGGTTTTATTGTGTTACGTTTAGATGCAGAATTAAATAAGGATACTATTTCAAAGCTTAAAAAACCGTTAGGTAAATTA
TATCCTCACTTTGAAGATGC

Product: DNA-dependent RNA polymerase, subunit E, RpoE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MNACTVCKYITNKERCPVCGNPTSDNWSGLLIITKPEESELANELNIDLAGEYCLRVR

Sequences:

>Translated_58_residues
MNACTVCKYITNKERCPVCGNPTSDNWSGLLIITKPEESELANELNIDLAGEYCLRVR
>Mature_58_residues
MNACTVCKYITNKERCPVCGNPTSDNWSGLLIITKPEESELANELNIDLAGEYCLRVR

Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates [H]

COG id: COG2093

COG function: function code K; DNA-directed RNA polymerase, subunit E''

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007178
- InterPro:   IPR022800
- ProDom:   PD019197 [H]

Pfam domain/function: PF06093 Spt4 [H]

EC number: =2.7.7.6 [H]

Molecular weight: Translated: 6490; Mature: 6490

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
10.3 %Cys+Met (Translated Protein)
8.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
10.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNACTVCKYITNKERCPVCGNPTSDNWSGLLIITKPEESELANELNIDLAGEYCLRVR
CCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCEEECCCEEEECC
>Mature Secondary Structure
MNACTVCKYITNKERCPVCGNPTSDNWSGLLIITKPEESELANELNIDLAGEYCLRVR
CCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]