| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642231
Identifier: 148642231
GI number: 148642231
Start: 163775
End: 166087
Strand: Reverse
Name: 148642231
Synonym: Msm_0171
Alternate gene names: NA
Gene position: 166087-163775 (Counterclockwise)
Preceding gene: 148642233
Following gene: 148642229
Centisome position: 8.96
GC content: 34.85
Gene sequence:
>2313_bases ATGTTCAATAAAAAGTATTTTATTTTAGTTTTTTTTGTTTTTCTGATAGCTATAACTTCAGTCAGTGCGCAGGATGATGC TGTAGCTAGTCAGGATTTAAATGAATTGTCATTTAATGATAATGTGGTGTTGGATACTAACACTGATGCAGAACACTATG CAGATGGTGGAGTAAGGCAGGACACAGGTCAGACTGCTGATGATTTGATTAATTTAAGTGAATGCAGTTCAGCTGTTCTT CAGGTAAGTGATAATGAAGGAGTTATTTGTATCAGGCGTGATGCTGCAAATGCCGCTGATATTTATATTGAAAGCGGTAG CTGGGGAGATATTGGTTATCTGAAGCAATATAAAACCAGCGGGGGTTATTTTTCACATGCAATTGTCACATCCAATGGCT GGCTTATTGGTAATGGTGGTGTAACAGACGGTTCTGTATTTCGCCAGATTGAAAGCATAGCTTCTGAAATGGTTGTCACC AATCAGATTACAAATGATTATCTTTCAAGAATTTATAAGATAATGTCCAGATATTCTTTAGGTCATTTTGTAATTAAGGC AGCTGACGGAACCTATGGTGTTGTTTTCAGTAATTTGTATCATGTTTCTAAACTGCAGCCTGGACAGTATGTTTTATGTC CTAATATTTATTCCATGTCTCAAAAAGGCAGTTATGACAGCAGTCTGAATCCGGTTGATGCAGCCATTAAAAAAGTTTAT ACTGACAGCTATGGTGTCAATAGGAGAAATATAATGACTTATCACTGGAAGCTGACTGCTTCTTCTAATGGACTGTCCTA TGGAGTAGATTCCTATGCATCAAATGATGACGGTAGAGGTGTTGGCCGCTCAACATCCAATATGGCAGATAATGTTTATT ACTTCAGTAATTTCCATTCAAGAAATTCCCTTCCATTAGCTAGAGATAAACTATTTTTGGGAACTCATGTTTTTGAAAAC AGTATTGAAGTTTTCAGATTACTGACTCCCGTCAGCTCATGTCCTGTTGGAGATAATATTGAGTTGAAATATCAGGTTAA CTATATTGCTCATTCAAGCCCTGTAGTTCAGTTTGCTCTTCCTGAAGGATTTGATTTTAATAATGCAAGTGTATCTAGGG GAAATTACAGATTGGATTCTGGCCGTATTGTAGTTTGGAATTTAAATGACTGTGATATGAATAATTACATCACAATTTCT CTTAAGGCACTTAAATCAGGACAGTTTGATTTATACCATTCACTGGACAACAATTTTGTCGGAAGCGATAAATTATTTGC AAATGATTATGGTGCTGTACTTTGTGCAGATGACGTAAACAAATATTATAGAGGTCCTGAAAGGTTTAGCATATGCTTAA AGGATGTTAATGGCAATCCTATTGTTGGTGAAAATGTTATTATTAATATCAATGGTGTTGATTATAAAAAAGTTAGTGAT GATAAGGGCACTGCTTCACTGGCCATTAATCTGGATTCTGGTGAATATCTTGCCAAAGTAAGTTATAATGGACGTTTCGG CAGTGATTCCAAAAAAGCCAATGTAAAAGTATATGAAACTATCTCAGGAAATGATATTGTAAAGATGTTCAGAAATGAAA CCCAGTTTTATGCAAAATTCATTGATAGTTCAGGAAACCCTTTAGCTAAAAGGGCAGTTACATTCAATATCAATGGTGTG TTTTACACAAGAAACACTGATGATTCAGGTTATGCAAAATTAAACATTAACTTAAGACCCGGAACCTACATTTTAACGGC ATACAACCCTGTAAACAATGAGAAAAAAGGTTTCAACATAACTGTCAAAGCTCTTATCTGTGAAAACCATGATATAGTTA AATATTATAAAAACAGCACACAATACACAGCAAAAGTCTATGATAAAGACGGAAGCTTAGCTATTGGTAAAAATGTAACA TTTAACATAAACGGGGTATTCTATAAAAGGACAGTTGATGAAAATGGTACAGTAACACTAAACATCAATTTGAATCCCGG AAAATATATTGTAACTGCAATATATGAAGGATATGATGTGGGAAACAATGTGGTTGTTAAAAGTGTTCTGCTTACTGATG ATTTGTCCATGAAGTTTAAGGACGGCAGTAAGTTTAATGCAACTGTTCTTGACGGTCAGGGAAAACCCTTAGCTAATCAG ACAGTGATATTCAATGTAAACGGAGTATTTTACAATAAAACAACAGCAGATAATGGTGTTGCAAGTTTAAATATCCGACT TCTCAGGGGAGAATATATCATCACTTCAATATGGAACAGTTATCAAATTGGAAATAAAATTACAATCAGTTAG
Upstream 100 bases:
>100_bases TGATTTATATTCTAAAAACACATCTGAATTTCATAAAAATGTTTATATTTTAACATACAATCATTAAATATCTGTTAATT AATAGGTTACAGGTGAATTC
Downstream 100 bases:
>100_bases GAGAAATCTTCTCTTAACTCTTTTTTTTATTTTTATTAATTTATTCCAATAATTTAATCATTCCAAAGCCCATTGAATTT TTCTCACCTATTCCGACATC
Product: hypothetical protein
Products: NA
Alternate protein names: Adhesin-Like Protein With Transglutaminase Domain; Peptidase M; Cysteine Protease; Transglutaminase-Like Protein Cysteine Protease
Number of amino acids: Translated: 770; Mature: 770
Protein sequence:
>770_residues MFNKKYFILVFFVFLIAITSVSAQDDAVASQDLNELSFNDNVVLDTNTDAEHYADGGVRQDTGQTADDLINLSECSSAVL QVSDNEGVICIRRDAANAADIYIESGSWGDIGYLKQYKTSGGYFSHAIVTSNGWLIGNGGVTDGSVFRQIESIASEMVVT NQITNDYLSRIYKIMSRYSLGHFVIKAADGTYGVVFSNLYHVSKLQPGQYVLCPNIYSMSQKGSYDSSLNPVDAAIKKVY TDSYGVNRRNIMTYHWKLTASSNGLSYGVDSYASNDDGRGVGRSTSNMADNVYYFSNFHSRNSLPLARDKLFLGTHVFEN SIEVFRLLTPVSSCPVGDNIELKYQVNYIAHSSPVVQFALPEGFDFNNASVSRGNYRLDSGRIVVWNLNDCDMNNYITIS LKALKSGQFDLYHSLDNNFVGSDKLFANDYGAVLCADDVNKYYRGPERFSICLKDVNGNPIVGENVIININGVDYKKVSD DKGTASLAINLDSGEYLAKVSYNGRFGSDSKKANVKVYETISGNDIVKMFRNETQFYAKFIDSSGNPLAKRAVTFNINGV FYTRNTDDSGYAKLNINLRPGTYILTAYNPVNNEKKGFNITVKALICENHDIVKYYKNSTQYTAKVYDKDGSLAIGKNVT FNINGVFYKRTVDENGTVTLNINLNPGKYIVTAIYEGYDVGNNVVVKSVLLTDDLSMKFKDGSKFNATVLDGQGKPLANQ TVIFNVNGVFYNKTTADNGVASLNIRLLRGEYIITSIWNSYQIGNKITIS
Sequences:
>Translated_770_residues MFNKKYFILVFFVFLIAITSVSAQDDAVASQDLNELSFNDNVVLDTNTDAEHYADGGVRQDTGQTADDLINLSECSSAVL QVSDNEGVICIRRDAANAADIYIESGSWGDIGYLKQYKTSGGYFSHAIVTSNGWLIGNGGVTDGSVFRQIESIASEMVVT NQITNDYLSRIYKIMSRYSLGHFVIKAADGTYGVVFSNLYHVSKLQPGQYVLCPNIYSMSQKGSYDSSLNPVDAAIKKVY TDSYGVNRRNIMTYHWKLTASSNGLSYGVDSYASNDDGRGVGRSTSNMADNVYYFSNFHSRNSLPLARDKLFLGTHVFEN SIEVFRLLTPVSSCPVGDNIELKYQVNYIAHSSPVVQFALPEGFDFNNASVSRGNYRLDSGRIVVWNLNDCDMNNYITIS LKALKSGQFDLYHSLDNNFVGSDKLFANDYGAVLCADDVNKYYRGPERFSICLKDVNGNPIVGENVIININGVDYKKVSD DKGTASLAINLDSGEYLAKVSYNGRFGSDSKKANVKVYETISGNDIVKMFRNETQFYAKFIDSSGNPLAKRAVTFNINGV FYTRNTDDSGYAKLNINLRPGTYILTAYNPVNNEKKGFNITVKALICENHDIVKYYKNSTQYTAKVYDKDGSLAIGKNVT FNINGVFYKRTVDENGTVTLNINLNPGKYIVTAIYEGYDVGNNVVVKSVLLTDDLSMKFKDGSKFNATVLDGQGKPLANQ TVIFNVNGVFYNKTTADNGVASLNIRLLRGEYIITSIWNSYQIGNKITIS >Mature_770_residues MFNKKYFILVFFVFLIAITSVSAQDDAVASQDLNELSFNDNVVLDTNTDAEHYADGGVRQDTGQTADDLINLSECSSAVL QVSDNEGVICIRRDAANAADIYIESGSWGDIGYLKQYKTSGGYFSHAIVTSNGWLIGNGGVTDGSVFRQIESIASEMVVT NQITNDYLSRIYKIMSRYSLGHFVIKAADGTYGVVFSNLYHVSKLQPGQYVLCPNIYSMSQKGSYDSSLNPVDAAIKKVY TDSYGVNRRNIMTYHWKLTASSNGLSYGVDSYASNDDGRGVGRSTSNMADNVYYFSNFHSRNSLPLARDKLFLGTHVFEN SIEVFRLLTPVSSCPVGDNIELKYQVNYIAHSSPVVQFALPEGFDFNNASVSRGNYRLDSGRIVVWNLNDCDMNNYITIS LKALKSGQFDLYHSLDNNFVGSDKLFANDYGAVLCADDVNKYYRGPERFSICLKDVNGNPIVGENVIININGVDYKKVSD DKGTASLAINLDSGEYLAKVSYNGRFGSDSKKANVKVYETISGNDIVKMFRNETQFYAKFIDSSGNPLAKRAVTFNINGV FYTRNTDDSGYAKLNINLRPGTYILTAYNPVNNEKKGFNITVKALICENHDIVKYYKNSTQYTAKVYDKDGSLAIGKNVT FNINGVFYKRTVDENGTVTLNINLNPGKYIVTAIYEGYDVGNNVVVKSVLLTDDLSMKFKDGSKFNATVLDGQGKPLANQ TVIFNVNGVFYNKTTADNGVASLNIRLLRGEYIITSIWNSYQIGNKITIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85229; Mature: 85229
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNKKYFILVFFVFLIAITSVSAQDDAVASQDLNELSFNDNVVLDTNTDAEHYADGGVRQ CCCCEEHHHHHHHHHHHHHCCCCCCCCHHHCCCHHCCCCCCEEEECCCCHHHHCCCCCCC DTGQTADDLINLSECSSAVLQVSDNEGVICIRRDAANAADIYIESGSWGDIGYLKQYKTS CCCCCHHHHEEHHHCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCHHHEECCC GGYFSHAIVTSNGWLIGNGGVTDGSVFRQIESIASEMVVTNQITNDYLSRIYKIMSRYSL CCEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCC GHFVIKAADGTYGVVFSNLYHVSKLQPGQYVLCPNIYSMSQKGSYDSSLNPVDAAIKKVY CEEEEEECCCCEEEEECCEEEHHCCCCCCEEECCCHHCCCCCCCCCCCCCHHHHHHHHHH TDSYGVNRRNIMTYHWKLTASSNGLSYGVDSYASNDDGRGVGRSTSNMADNVYYFSNFHS CCCCCCCCCEEEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC RNSLPLARDKLFLGTHVFENSIEVFRLLTPVSSCPVGDNIELKYQVNYIAHSSPVVQFAL CCCCCCCCCEEEEEHHHHHCCHHHHEEECCHHCCCCCCCEEEEEEEEEEECCCCEEEEEC PEGFDFNNASVSRGNYRLDSGRIVVWNLNDCDMNNYITISLKALKSGQFDLYHSLDNNFV CCCCCCCCCEECCCCEEECCCEEEEEECCCCCCCCEEEEEEEEECCCCEEEEECCCCCCC GSDKLFANDYGAVLCADDVNKYYRGPERFSICLKDVNGNPIVGENVIININGVDYKKVSD CCCCEEECCCCEEEEECCHHHHHCCCCCEEEEEEECCCCCEECCEEEEEECCCCEEEECC DKGTASLAINLDSGEYLAKVSYNGRFGSDSKKANVKVYETISGNDIVKMFRNETQFYAKF CCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHCCHHEEHHH IDSSGNPLAKRAVTFNINGVFYTRNTDDSGYAKLNINLRPGTYILTAYNPVNNEKKGFNI HCCCCCCCEEEEEEEEEEEEEEECCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCEEE TVKALICENHDIVKYYKNSTQYTAKVYDKDGSLAIGKNVTFNINGVFYKRTVDENGTVTL EEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEECCEEEEEEEEEEEEEEECCCCEEEE NINLNPGKYIVTAIYEGYDVGNNVVVKSVLLTDDLSMKFKDGSKFNATVLDGQGKPLANQ EEEECCCCEEEEEEEECCCCCCCEEEEEEEEECCCEEEECCCCEEEEEEECCCCCCCCCC TVIFNVNGVFYNKTTADNGVASLNIRLLRGEYIITSIWNSYQIGNKITIS EEEEEECEEEEECCCCCCCEEEEEEEEEECCEEEEEECCCEECCCEEEEC >Mature Secondary Structure MFNKKYFILVFFVFLIAITSVSAQDDAVASQDLNELSFNDNVVLDTNTDAEHYADGGVRQ CCCCEEHHHHHHHHHHHHHCCCCCCCCHHHCCCHHCCCCCCEEEECCCCHHHHCCCCCCC DTGQTADDLINLSECSSAVLQVSDNEGVICIRRDAANAADIYIESGSWGDIGYLKQYKTS CCCCCHHHHEEHHHCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCHHHEECCC GGYFSHAIVTSNGWLIGNGGVTDGSVFRQIESIASEMVVTNQITNDYLSRIYKIMSRYSL CCEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCC GHFVIKAADGTYGVVFSNLYHVSKLQPGQYVLCPNIYSMSQKGSYDSSLNPVDAAIKKVY CEEEEEECCCCEEEEECCEEEHHCCCCCCEEECCCHHCCCCCCCCCCCCCHHHHHHHHHH TDSYGVNRRNIMTYHWKLTASSNGLSYGVDSYASNDDGRGVGRSTSNMADNVYYFSNFHS CCCCCCCCCEEEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC RNSLPLARDKLFLGTHVFENSIEVFRLLTPVSSCPVGDNIELKYQVNYIAHSSPVVQFAL CCCCCCCCCEEEEEHHHHHCCHHHHEEECCHHCCCCCCCEEEEEEEEEEECCCCEEEEEC PEGFDFNNASVSRGNYRLDSGRIVVWNLNDCDMNNYITISLKALKSGQFDLYHSLDNNFV CCCCCCCCCEECCCCEEECCCEEEEEECCCCCCCCEEEEEEEEECCCCEEEEECCCCCCC GSDKLFANDYGAVLCADDVNKYYRGPERFSICLKDVNGNPIVGENVIININGVDYKKVSD CCCCEEECCCCEEEEECCHHHHHCCCCCEEEEEEECCCCCEECCEEEEEECCCCEEEECC DKGTASLAINLDSGEYLAKVSYNGRFGSDSKKANVKVYETISGNDIVKMFRNETQFYAKF CCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHCCHHEEHHH IDSSGNPLAKRAVTFNINGVFYTRNTDDSGYAKLNINLRPGTYILTAYNPVNNEKKGFNI HCCCCCCCEEEEEEEEEEEEEEECCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCEEE TVKALICENHDIVKYYKNSTQYTAKVYDKDGSLAIGKNVTFNINGVFYKRTVDENGTVTL EEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEECCEEEEEEEEEEEEEEECCCCEEEE NINLNPGKYIVTAIYEGYDVGNNVVVKSVLLTDDLSMKFKDGSKFNATVLDGQGKPLANQ EEEECCCCEEEEEEEECCCCCCCEEEEEEEEECCCEEEECCCCEEEEEEECCCCCCCCCC TVIFNVNGVFYNKTTADNGVASLNIRLLRGEYIITSIWNSYQIGNKITIS EEEEEECEEEEECCCCCCCEEEEEEEEEECCEEEEEECCCEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA