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The map label for this gene is 148642186

Identifier: 148642186

GI number: 148642186

Start: 123877

End: 124392

Strand: Reverse

Name: 148642186

Synonym: Msm_0126

Alternate gene names: NA

Gene position: 124392-123877 (Counterclockwise)

Preceding gene: 148642187

Following gene: 148642185

Centisome position: 6.71

GC content: 32.95

Gene sequence:

>516_bases
ATGAAAGTTACAGTTTTTCATGCAAATGAATGTGATAGAAAGAAGTGCACTTCTATCAAAATGGAAAAATTAGGTAAATG
TAAATTGGTATATAATATTAATAAAATACCTAGTGGAGCTGTTGTGTTAAACCCGTTTGCCCAAAAAGCTGTTTCATATG
AGGATTACAGATATGTTCACAGAAGGGGAGTTGTAGGGCTTGACTGTTCCTGGAACGAAGTGTCAAGTTCTAAAAAATTC
TTCTCTTTATCCAAATATCACAGATCCCTTCCCTTTTTAATAGCCACCAATCCTGTTAATTACGGAAAGCCATGTATTTT
ATCTACAGTTGAAGCTGTTTCAGCTACTTTATATATCACCCGTTTTAAAGATGAGGCAAAAGATATTTTGGATGGTTTTA
AATGGGGTCATACATTTTTGGAATTAAATCATGATCTTTTAGAAGCTTACAGTGAAGCTGATACTAGTAAGGATGTTGTC
AGGGTTCAAAATGAATTTTTAGAATCTAAAGAATAA

Upstream 100 bases:

>100_bases
TGAACAGTTCGGTTTGTCTCAGGATGAATTTAACCATCAAATTGATTTGATACGTCAATATGAAGCAGGAAATACTTCTG
TATTGGAAGGCAGTGTTTAA

Downstream 100 bases:

>100_bases
TTTTTGGATTCTTTCTTTTTATTATTTATTTAGGTGTAAAATCGCTTTATTCTTACTGATTATTTCCATATTCATGATTT
GATTTTTGTTATTGCTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKVTVFHANECDRKKCTSIKMEKLGKCKLVYNINKIPSGAVVLNPFAQKAVSYEDYRYVHRRGVVGLDCSWNEVSSSKKF
FSLSKYHRSLPFLIATNPVNYGKPCILSTVEAVSATLYITRFKDEAKDILDGFKWGHTFLELNHDLLEAYSEADTSKDVV
RVQNEFLESKE

Sequences:

>Translated_171_residues
MKVTVFHANECDRKKCTSIKMEKLGKCKLVYNINKIPSGAVVLNPFAQKAVSYEDYRYVHRRGVVGLDCSWNEVSSSKKF
FSLSKYHRSLPFLIATNPVNYGKPCILSTVEAVSATLYITRFKDEAKDILDGFKWGHTFLELNHDLLEAYSEADTSKDVV
RVQNEFLESKE
>Mature_171_residues
MKVTVFHANECDRKKCTSIKMEKLGKCKLVYNINKIPSGAVVLNPFAQKAVSYEDYRYVHRRGVVGLDCSWNEVSSSKKF
FSLSKYHRSLPFLIATNPVNYGKPCILSTVEAVSATLYITRFKDEAKDILDGFKWGHTFLELNHDLLEAYSEADTSKDVV
RVQNEFLESKE

Specific function: Unknown

COG id: COG2042

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0293 family

Homologues:

Organism=Homo sapiens, GI47777330, Length=166, Percent_Identity=36.7469879518072, Blast_Score=117, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI25148466, Length=167, Percent_Identity=37.7245508982036, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6324579, Length=171, Percent_Identity=33.9181286549708, Blast_Score=104, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24647066, Length=172, Percent_Identity=45.3488372093023, Blast_Score=148, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y126_METS3 (A5UJF3)

Other databases:

- EMBL:   CP000678
- RefSeq:   YP_001272699.1
- STRING:   A5UJF3
- GeneID:   5216792
- GenomeReviews:   CP000678_GR
- KEGG:   msi:Msm_0126
- eggNOG:   arNOG09130
- HOGENOM:   HBG527152
- OMA:   TALDCSW
- ProtClustDB:   PRK02287
- GO:   GO:0005737
- HAMAP:   MF_01116
- InterPro:   IPR007177
- InterPro:   IPR007209
- InterPro:   IPR022968
- ProDom:   PD016638

Pfam domain/function: PF04034 DUF367; PF04068 RLI

EC number: NA

Molecular weight: Translated: 19540; Mature: 19540

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTVFHANECDRKKCTSIKMEKLGKCKLVYNINKIPSGAVVLNPFAQKAVSYEDYRYVH
CEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECHHHHHHCCHHHHHHHH
RRGVVGLDCSWNEVSSSKKFFSLSKYHRSLPFLIATNPVNYGKPCILSTVEAVSATLYIT
HCCCEEECCCCHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHEEE
RFKDEAKDILDGFKWGHTFLELNHDLLEAYSEADTSKDVVRVQNEFLESKE
ECHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKVTVFHANECDRKKCTSIKMEKLGKCKLVYNINKIPSGAVVLNPFAQKAVSYEDYRYVH
CEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECHHHHHHCCHHHHHHHH
RRGVVGLDCSWNEVSSSKKFFSLSKYHRSLPFLIATNPVNYGKPCILSTVEAVSATLYIT
HCCCEEECCCCHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHEEE
RFKDEAKDILDGFKWGHTFLELNHDLLEAYSEADTSKDVVRVQNEFLESKE
ECHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA