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The map label for this gene is yneB [C]

Identifier: 148642116

GI number: 148642116

Start: 52205

End: 52999

Strand: Reverse

Name: yneB [C]

Synonym: Msm_0056

Alternate gene names: 148642116

Gene position: 52999-52205 (Counterclockwise)

Preceding gene: 148642117

Following gene: 148642115

Centisome position: 2.86

GC content: 37.11

Gene sequence:

>795_bases
ATGATGATTGGTAAAAAGATTCGTTTAGAAAGAATCATTAACAGACATACCGGTAGAACTGTAATAGCTCCAATGGACCA
TGGAGTTTCTAATGGCCCAATGAAGGGTATTATAGATATAGATAAAACTGTTGAAAGCATTTCACAAGGTGGGGCAGATG
CAATACTTATGCATAAAGGTATTGTAGAACAGGGCCACAGAGGATACGGTAAAGATATAGGTCTTATTGTGCATTTGTCT
GCAAGTACTTCCTTAGCACCAAATCCAAATAATAAAGTAATTGTTACTTCTGTTGAAAAAGCTATTCAGTTAGGAGCAGA
TGCAGTATCTGTACATGTTAACTTAGGCAGTGAAACAGAAAGTGAAATGTTGCAGGAATTAGGGGAAATCTCTGAAACCT
GCAGTTACTGGGGAATTCCTCTTTTAGCTATGATGTACCCGAGAGGTCAAAAGGTAGAAAATGAACATGATGTGGAGTTA
GTTAAACATGCTGCACGTGTAGGTTCAGAACTTGGTGTGGATATTGTAAAAACCAATTATACAGGGGATCCTGATTCATT
TAAAGAAGTAGTTGAAGGAGCATTAGTGCCTGTAGTAATAGCTGGAGGTCCAAAAGTGGATACTGACGAAGAATTATTGC
AGATGGTAAAAGATTCTATTGAAGTTGGTGGAGCTGGAGTAGCATTTGGACGTAACCTTTTCCAGGCTGAAAACCCAGGT
AAAATAACTAAAGCTATTTCAGAAGTAGTGCATAATGATTTAGAAGTAAATGAAGCTTTAAAATTCTTGAAATAA

Upstream 100 bases:

>100_bases
ATATTTTTAACCTAAAATTAGCTTTTTTTATATGATGTATTAATGTTTATATAGTGCATTAAAGATAATATTACTCATAG
TTATAAATGAGGTATTAAAT

Downstream 100 bases:

>100_bases
GGTGATTTTGTGGAAAATAAATTCGCTTGGATAATGACTCCAAACAAGCCATGGGATGATAAAAAAGAAATGATTACAAC
TGCATTGGAATCAGGCATCA

Product: fructose-bisphosphate aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MMIGKKIRLERIINRHTGRTVIAPMDHGVSNGPMKGIIDIDKTVESISQGGADAILMHKGIVEQGHRGYGKDIGLIVHLS
ASTSLAPNPNNKVIVTSVEKAIQLGADAVSVHVNLGSETESEMLQELGEISETCSYWGIPLLAMMYPRGQKVENEHDVEL
VKHAARVGSELGVDIVKTNYTGDPDSFKEVVEGALVPVVIAGGPKVDTDEELLQMVKDSIEVGGAGVAFGRNLFQAENPG
KITKAISEVVHNDLEVNEALKFLK

Sequences:

>Translated_264_residues
MMIGKKIRLERIINRHTGRTVIAPMDHGVSNGPMKGIIDIDKTVESISQGGADAILMHKGIVEQGHRGYGKDIGLIVHLS
ASTSLAPNPNNKVIVTSVEKAIQLGADAVSVHVNLGSETESEMLQELGEISETCSYWGIPLLAMMYPRGQKVENEHDVEL
VKHAARVGSELGVDIVKTNYTGDPDSFKEVVEGALVPVVIAGGPKVDTDEELLQMVKDSIEVGGAGVAFGRNLFQAENPG
KITKAISEVVHNDLEVNEALKFLK
>Mature_264_residues
MMIGKKIRLERIINRHTGRTVIAPMDHGVSNGPMKGIIDIDKTVESISQGGADAILMHKGIVEQGHRGYGKDIGLIVHLS
ASTSLAPNPNNKVIVTSVEKAIQLGADAVSVHVNLGSETESEMLQELGEISETCSYWGIPLLAMMYPRGQKVENEHDVEL
VKHAARVGSELGVDIVKTNYTGDPDSFKEVVEGALVPVVIAGGPKVDTDEELLQMVKDSIEVGGAGVAFGRNLFQAENPG
KITKAISEVVHNDLEVNEALKFLK

Specific function: Unknown

COG id: COG1830

COG function: function code G; DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family [H]

Homologues:

Organism=Escherichia coli, GI1787796, Length=259, Percent_Identity=30.1158301158301, Blast_Score=124, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR010210
- InterPro:   IPR002915 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: 4.2.1.- [C]

Molecular weight: Translated: 28349; Mature: 28349

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIGKKIRLERIINRHTGRTVIAPMDHGVSNGPMKGIIDIDKTVESISQGGADAILMHKG
CCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHCCCCCEEEHHHH
IVEQGHRGYGKDIGLIVHLSASTSLAPNPNNKVIVTSVEKAIQLGADAVSVHVNLGSETE
HHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHCCCEEEEEEECCCCCH
SEMLQELGEISETCSYWGIPLLAMMYPRGQKVENEHDVELVKHAARVGSELGVDIVKTNY
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECC
TGDPDSFKEVVEGALVPVVIAGGPKVDTDEELLQMVKDSIEVGGAGVAFGRNLFQAENPG
CCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
KITKAISEVVHNDLEVNEALKFLK
HHHHHHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure
MMIGKKIRLERIINRHTGRTVIAPMDHGVSNGPMKGIIDIDKTVESISQGGADAILMHKG
CCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHCCCCCEEEHHHH
IVEQGHRGYGKDIGLIVHLSASTSLAPNPNNKVIVTSVEKAIQLGADAVSVHVNLGSETE
HHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHCCCEEEEEEECCCCCH
SEMLQELGEISETCSYWGIPLLAMMYPRGQKVENEHDVELVKHAARVGSELGVDIVKTNY
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECC
TGDPDSFKEVVEGALVPVVIAGGPKVDTDEELLQMVKDSIEVGGAGVAFGRNLFQAENPG
CCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
KITKAISEVVHNDLEVNEALKFLK
HHHHHHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]