| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148381544
Identifier: 148381544
GI number: 148381544
Start: 3847851
End: 3848909
Strand: Reverse
Name: 148381544
Synonym: CBO3605
Alternate gene names: NA
Gene position: 3848909-3847851 (Counterclockwise)
Preceding gene: 148381545
Following gene: 148381543
Centisome position: 99.02
GC content: 29.08
Gene sequence:
>1059_bases ATGGGGTTTAAGCCTTTAAAAATAGGAAAGTTAATTTCCAATATACCTATAATTCAAGGTGGTATGGGGATAGGTGTATC AGGATATAATTTAGCATCAGCTGTAGCAAATGCTGGAGCTATTGGGGTAATATCTGCAGCTCAAATAGGATATAGAGAAA AAGATTTTAAGACAAATACTAAAGAAGCTAATATAAGAGCATTAAGAAAAGAAATAAGAAAAGCAAGGGAGCTATCTCCA GAGGGAATTTTGGGCGTAAACATAATGGTAGCTATGAATAATTATGAAGAATTAGTTAATGTTTGTCTAGAAGAAAAGAT AGATATAATAATTTCTGGAGCTGGATTACCATTAAAATTACCAAGTTATATAAAAGATAGCGATATTAAAATAGTCCCTA TAGTTTCTTCTAAAAAAGCTACAACTATAATCATAAAGCAATGGATTAAAAAATATGACAAATTACCTGATCTAATAATT GTAGAAGGACCATTAGCGGGGGGACATCTTGGCTTTAAATATGATGATTTAAATAATGAAGAGTTAAATTTGGGCAATAT TTTAAAGGATGTTTTAGAAGAAGTAAGGATTTATGAGGATAAATTTCATATTAATATACCTGTAATAGCAGCAGGAGGTA TATATGAAAGAAAAGATATAAAAAAATTTTTAGAATTAGGAGCTAGTGGTGTTCAAATAGCAACAAGATTTATAGCTACT AAAGAGTGTGATGCTCACATTAATTTTAAAAAAGCTTTAATTAATTGCAAAGAGCAAGATATAAAAATAATTAAAAGTCC TGTAGGATTGCCTGGAAGAGCTATAAAAAATGCTTTTGTAAATAAAGTGTGTAAGGCTAGGATAAATCCAGAATTTTGCT TTAAGTGTCTAAAAAGTTGCAACCCTAAGGAAACTCCTTATTGTATATCTAAAGCATTAATAGAAGCAGTAAAAGGAAAT TTAGAAGAAGGATTAATTTTTACTGGAAGTAATGGATATAGAATAAATAAAATTACCACTGTAAAAGATTTAATAAGAGA GCTAACAGAGAATATATAG
Upstream 100 bases:
>100_bases ATGATAATAAAAAATATCACTATCATTGACAGTGATATTTTTTTATTATATACTTTGACTATCAAAATATTTGATTATCA AAAAAGTGAGGAGAAAAGAA
Downstream 100 bases:
>100_bases GGAAGGGGTGATTTTTTGAGTGAATCAATAAATATTTTAAATGAGCTTTTAGTAGATAACTTTAATGATATATTAACCAT TGAACAACGAGCATTACAGT
Product: oxidoreductase, 2-nitropropane dioxygenase family
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MGFKPLKIGKLISNIPIIQGGMGIGVSGYNLASAVANAGAIGVISAAQIGYREKDFKTNTKEANIRALRKEIRKARELSP EGILGVNIMVAMNNYEELVNVCLEEKIDIIISGAGLPLKLPSYIKDSDIKIVPIVSSKKATTIIIKQWIKKYDKLPDLII VEGPLAGGHLGFKYDDLNNEELNLGNILKDVLEEVRIYEDKFHINIPVIAAGGIYERKDIKKFLELGASGVQIATRFIAT KECDAHINFKKALINCKEQDIKIIKSPVGLPGRAIKNAFVNKVCKARINPEFCFKCLKSCNPKETPYCISKALIEAVKGN LEEGLIFTGSNGYRINKITTVKDLIRELTENI
Sequences:
>Translated_352_residues MGFKPLKIGKLISNIPIIQGGMGIGVSGYNLASAVANAGAIGVISAAQIGYREKDFKTNTKEANIRALRKEIRKARELSP EGILGVNIMVAMNNYEELVNVCLEEKIDIIISGAGLPLKLPSYIKDSDIKIVPIVSSKKATTIIIKQWIKKYDKLPDLII VEGPLAGGHLGFKYDDLNNEELNLGNILKDVLEEVRIYEDKFHINIPVIAAGGIYERKDIKKFLELGASGVQIATRFIAT KECDAHINFKKALINCKEQDIKIIKSPVGLPGRAIKNAFVNKVCKARINPEFCFKCLKSCNPKETPYCISKALIEAVKGN LEEGLIFTGSNGYRINKITTVKDLIRELTENI >Mature_351_residues GFKPLKIGKLISNIPIIQGGMGIGVSGYNLASAVANAGAIGVISAAQIGYREKDFKTNTKEANIRALRKEIRKARELSPE GILGVNIMVAMNNYEELVNVCLEEKIDIIISGAGLPLKLPSYIKDSDIKIVPIVSSKKATTIIIKQWIKKYDKLPDLIIV EGPLAGGHLGFKYDDLNNEELNLGNILKDVLEEVRIYEDKFHINIPVIAAGGIYERKDIKKFLELGASGVQIATRFIATK ECDAHINFKKALINCKEQDIKIIKSPVGLPGRAIKNAFVNKVCKARINPEFCFKCLKSCNPKETPYCISKALIEAVKGNL EEGLIFTGSNGYRINKITTVKDLIRELTENI
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=129, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 38782; Mature: 38651
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFKPLKIGKLISNIPIIQGGMGIGVSGYNLASAVANAGAIGVISAAQIGYREKDFKTNT CCCCCCHHHHHHHCCCEEECCCCCCCCCCHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCC KEANIRALRKEIRKARELSPEGILGVNIMVAMNNYEELVNVCLEEKIDIIISGAGLPLKL CHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHHCCCEEEEECCCCCEEC PSYIKDSDIKIVPIVSSKKATTIIIKQWIKKYDKLPDLIIVEGPLAGGHLGFKYDDLNNE CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCC ELNLGNILKDVLEEVRIYEDKFHINIPVIAAGGIYERKDIKKFLELGASGVQIATRFIAT CCCHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHH KECDAHINFKKALINCKEQDIKIIKSPVGLPGRAIKNAFVNKVCKARINPEFCFKCLKSC CCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC NPKETPYCISKALIEAVKGNLEEGLIFTGSNGYRINKITTVKDLIRELTENI CCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHCC >Mature Secondary Structure GFKPLKIGKLISNIPIIQGGMGIGVSGYNLASAVANAGAIGVISAAQIGYREKDFKTNT CCCCCHHHHHHHCCCEEECCCCCCCCCCHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCC KEANIRALRKEIRKARELSPEGILGVNIMVAMNNYEELVNVCLEEKIDIIISGAGLPLKL CHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHHCCCEEEEECCCCCEEC PSYIKDSDIKIVPIVSSKKATTIIIKQWIKKYDKLPDLIIVEGPLAGGHLGFKYDDLNNE CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCC ELNLGNILKDVLEEVRIYEDKFHINIPVIAAGGIYERKDIKKFLELGASGVQIATRFIAT CCCHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHH KECDAHINFKKALINCKEQDIKIIKSPVGLPGRAIKNAFVNKVCKARINPEFCFKCLKSC CCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC NPKETPYCISKALIEAVKGNLEEGLIFTGSNGYRINKITTVKDLIRELTENI CCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA