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The map label for this gene is sonO [H]

Identifier: 148381498

GI number: 148381498

Start: 3803553

End: 3805349

Strand: Reverse

Name: sonO [H]

Synonym: CBO3558

Alternate gene names: 148381498

Gene position: 3805349-3803553 (Counterclockwise)

Preceding gene: 148381499

Following gene: 148381495

Centisome position: 97.9

GC content: 28.05

Gene sequence:

>1797_bases
ATGAAGGGCACAGTAGTAGCAACATGGGTAAAAACCTGCAGGAAGCTCTATGGGGAAGAAGCGGTTGATAAAGCTATGAA
TGCTGTAGGATGGCAAGGCAAAATATTTTCACCAATGGAAAATGTTGAAGATACAAAAGTTAAGAATATGATAAATGAAA
TAGCAAGTAATGTTAATAAGGATGTAAAGACTTTATGGGGACAAATAGGACAAGATAATCTAAAAGCTTTTAATAATGAT
TATCCAGCTTTTTTCGAACATGAGAACTTATATTCATTTTTAAAGTCTATGTTTGATGTTCATATAGTTATGACTAAAAA
ATTCCCAGGGGCTAAGCCGCCACTTTTAACTATAGAACCTATATCTGAAAAAGAGGCTATATTCAGTTATAGCTCCAAAA
GAGGAATGTTTGATTATTTTTTAGGACTCTTAAAAGGAAGTGCAGAGCATTTTAAAGAAAATATTAAAGTAGATGAAATA
GAAAGAAAGGATGATTTTTTAAAACTTAAGCTTACCTTTGAAAAAAATATTTATTATAATAAAACTTTTAAATTTAATAA
AATATTATCTTTAGGATTTATAAAAAATATAGGTGGAAAAGTTGCTTTATTTACATTCATATTAACTATTTTATCATCTC
TTGTTTTACTAGGATTTAATAATTTATTTAAGGCCTTATCCTTATCTTTTATATCTTCTTTTGCAGCTTATATATCAACA
GAAATATTGTTAAAACCTAAATATTTAATATTTGAAGAAATAAATAAAATAAATAAAAACCATTATGTAGAAGATGGTGA
TATTAAAACAGGTGATTTTTTAGAGGAATTATATAAAGAGTTAAAGAAACATAAAGATATAATTAAAGCTGATTTTGTAG
GTTTTAAGGGTGTTACAGATGAGATGAATACTTTCGTAGGCAATATAAATGTTATATCAGAAACTATGAGTCATACATCT
ACAGAGATATCAGGGGTAGTTGAACAAGTAGCTAGTTGTGCAGTGAACCAGGCTGAAAATACTGAACAAGTAGTAGCAGT
TTTAAATAATAATATACAAAATTTAAAAGATATAGTCAATAGTGAAAATAGTAATAAGTTAGAATTAGAAAAGGCTTTAG
AAAAGGTAAATAACAGTTATAATAATGTTAATAATACTAGTAAAAATATTTTAGATTCCCTTGAGAAATTCCAAAAAGTT
AAGGATAAAGGATTAGAATTAGAAACCAAGGCAAAAGATATAACAAACATAGTATCCATTGTATCAGGAATATCAGAACA
AACTAATTTATTAGCCCTAAATGCATCCATTGAAGCAGCAAGAGCAGGAGAACAAGGTAAAGGTTTTGCGGTAGTTGCAG
AAGAGGTTAGAAAGCTAGCAGAACAGTCTAAAGAGGCAGTTGAAGAAATTAATAATAATCTTATAGAATTTGCAGGAGAT
ATAAAAAATTTAGTTATTAGAATAGAATCTCAATATAATGTATTAGAGCAGGAAACAGATAGATTGGAAGAGGTTAGAGA
TATTAGTTATGGAGCTACAACATCTATAGGTACCGTAGCCTCTGCCATGATTAAGACTATAAATGAACTTAATAAAGAAG
CAGATTCTATATCAAGCATATATGATAACATAGAATCTTTGGCTGCTATAGCAGAAGAAAATTCAGCTTCATCGGAAGAA
GTTAGTGCTAACGTTTCAAGCTATACTAATGAGATTAAAAAATTAGTTAATAATATTCATGAGTTTAAACAGATAACAGA
AACATTTAAATCAGATTTAAGTAGATATAAAATATAA

Upstream 100 bases:

>100_bases
CTTTGTAAATAATTTGCATACATTATATAATTAATATATTAAAAGAATTTAAATAATCACGATTATTAAATAGAAATATA
AGGTATGAGGAGGAATCTTT

Downstream 100 bases:

>100_bases
TAAGAGGGTTTATTTATTTTTTATTTAAAAATTCTATAAAACATAAATTTTATTTTGAGAAAGCTATGAAATATAAAGAT
AATATCTAAATTTCATAGCT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MKGTVVATWVKTCRKLYGEEAVDKAMNAVGWQGKIFSPMENVEDTKVKNMINEIASNVNKDVKTLWGQIGQDNLKAFNND
YPAFFEHENLYSFLKSMFDVHIVMTKKFPGAKPPLLTIEPISEKEAIFSYSSKRGMFDYFLGLLKGSAEHFKENIKVDEI
ERKDDFLKLKLTFEKNIYYNKTFKFNKILSLGFIKNIGGKVALFTFILTILSSLVLLGFNNLFKALSLSFISSFAAYIST
EILLKPKYLIFEEINKINKNHYVEDGDIKTGDFLEELYKELKKHKDIIKADFVGFKGVTDEMNTFVGNINVISETMSHTS
TEISGVVEQVASCAVNQAENTEQVVAVLNNNIQNLKDIVNSENSNKLELEKALEKVNNSYNNVNNTSKNILDSLEKFQKV
KDKGLELETKAKDITNIVSIVSGISEQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKEAVEEINNNLIEFAGD
IKNLVIRIESQYNVLEQETDRLEEVRDISYGATTSIGTVASAMIKTINELNKEADSISSIYDNIESLAAIAEENSASSEE
VSANVSSYTNEIKKLVNNIHEFKQITETFKSDLSRYKI

Sequences:

>Translated_598_residues
MKGTVVATWVKTCRKLYGEEAVDKAMNAVGWQGKIFSPMENVEDTKVKNMINEIASNVNKDVKTLWGQIGQDNLKAFNND
YPAFFEHENLYSFLKSMFDVHIVMTKKFPGAKPPLLTIEPISEKEAIFSYSSKRGMFDYFLGLLKGSAEHFKENIKVDEI
ERKDDFLKLKLTFEKNIYYNKTFKFNKILSLGFIKNIGGKVALFTFILTILSSLVLLGFNNLFKALSLSFISSFAAYIST
EILLKPKYLIFEEINKINKNHYVEDGDIKTGDFLEELYKELKKHKDIIKADFVGFKGVTDEMNTFVGNINVISETMSHTS
TEISGVVEQVASCAVNQAENTEQVVAVLNNNIQNLKDIVNSENSNKLELEKALEKVNNSYNNVNNTSKNILDSLEKFQKV
KDKGLELETKAKDITNIVSIVSGISEQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKEAVEEINNNLIEFAGD
IKNLVIRIESQYNVLEQETDRLEEVRDISYGATTSIGTVASAMIKTINELNKEADSISSIYDNIESLAAIAEENSASSEE
VSANVSSYTNEIKKLVNNIHEFKQITETFKSDLSRYKI
>Mature_598_residues
MKGTVVATWVKTCRKLYGEEAVDKAMNAVGWQGKIFSPMENVEDTKVKNMINEIASNVNKDVKTLWGQIGQDNLKAFNND
YPAFFEHENLYSFLKSMFDVHIVMTKKFPGAKPPLLTIEPISEKEAIFSYSSKRGMFDYFLGLLKGSAEHFKENIKVDEI
ERKDDFLKLKLTFEKNIYYNKTFKFNKILSLGFIKNIGGKVALFTFILTILSSLVLLGFNNLFKALSLSFISSFAAYIST
EILLKPKYLIFEEINKINKNHYVEDGDIKTGDFLEELYKELKKHKDIIKADFVGFKGVTDEMNTFVGNINVISETMSHTS
TEISGVVEQVASCAVNQAENTEQVVAVLNNNIQNLKDIVNSENSNKLELEKALEKVNNSYNNVNNTSKNILDSLEKFQKV
KDKGLELETKAKDITNIVSIVSGISEQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKEAVEEINNNLIEFAGD
IKNLVIRIESQYNVLEQETDRLEEVRDISYGATTSIGTVASAMIKTINELNKEADSISSIYDNIESLAAIAEENSASSEE
VSANVSSYTNEIKKLVNNIHEFKQITETFKSDLSRYKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=309, Percent_Identity=26.8608414239482, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1788194, Length=247, Percent_Identity=27.5303643724696, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI2367378, Length=235, Percent_Identity=30.6382978723404, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1787690, Length=396, Percent_Identity=22.979797979798, Blast_Score=86, Evalue=1e-17,
Organism=Escherichia coli, GI1789453, Length=291, Percent_Identity=26.8041237113402, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 67166; Mature: 67166

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGTVVATWVKTCRKLYGEEAVDKAMNAVGWQGKIFSPMENVEDTKVKNMINEIASNVNK
CCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCH
DVKTLWGQIGQDNLKAFNNDYPAFFEHENLYSFLKSMFDVHIVMTKKFPGAKPPLLTIEP
HHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEECC
ISEKEAIFSYSSKRGMFDYFLGLLKGSAEHFKENIKVDEIERKDDFLKLKLTFEKNIYYN
CCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCEEEEEEEEECCEEEC
KTFKFNKILSLGFIKNIGGKVALFTFILTILSSLVLLGFNNLFKALSLSFISSFAAYIST
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EILLKPKYLIFEEINKINKNHYVEDGDIKTGDFLEELYKELKKHKDIIKADFVGFKGVTD
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
EMNTFVGNINVISETMSHTSTEISGVVEQVASCAVNQAENTEQVVAVLNNNIQNLKDIVN
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHC
SENSNKLELEKALEKVNNSYNNVNNTSKNILDSLEKFQKVKDKGLELETKAKDITNIVSI
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VSGISEQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKEAVEEINNNLIEFAGD
HHCCCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKNLVIRIESQYNVLEQETDRLEEVRDISYGATTSIGTVASAMIKTINELNKEADSISSI
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDNIESLAAIAEENSASSEEVSANVSSYTNEIKKLVNNIHEFKQITETFKSDLSRYKI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGTVVATWVKTCRKLYGEEAVDKAMNAVGWQGKIFSPMENVEDTKVKNMINEIASNVNK
CCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCH
DVKTLWGQIGQDNLKAFNNDYPAFFEHENLYSFLKSMFDVHIVMTKKFPGAKPPLLTIEP
HHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEECC
ISEKEAIFSYSSKRGMFDYFLGLLKGSAEHFKENIKVDEIERKDDFLKLKLTFEKNIYYN
CCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCEEEEEEEEECCEEEC
KTFKFNKILSLGFIKNIGGKVALFTFILTILSSLVLLGFNNLFKALSLSFISSFAAYIST
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EILLKPKYLIFEEINKINKNHYVEDGDIKTGDFLEELYKELKKHKDIIKADFVGFKGVTD
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
EMNTFVGNINVISETMSHTSTEISGVVEQVASCAVNQAENTEQVVAVLNNNIQNLKDIVN
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHC
SENSNKLELEKALEKVNNSYNNVNNTSKNILDSLEKFQKVKDKGLELETKAKDITNIVSI
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VSGISEQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKEAVEEINNNLIEFAGD
HHCCCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKNLVIRIESQYNVLEQETDRLEEVRDISYGATTSIGTVASAMIKTINELNKEADSISSI
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDNIESLAAIAEENSASSEEVSANVSSYTNEIKKLVNNIHEFKQITETFKSDLSRYKI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]