| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148381495
Identifier: 148381495
GI number: 148381495
Start: 3800159
End: 3801295
Strand: Reverse
Name: 148381495
Synonym: CBO3555
Alternate gene names: NA
Gene position: 3801295-3800159 (Counterclockwise)
Preceding gene: 148381498
Following gene: 148381494
Centisome position: 97.8
GC content: 28.06
Gene sequence:
>1137_bases TTGTATTATAGAAATTTTGCAAAAAAAATAATAATATTTTTAATTTTTACTACTACCATTTCATTATTTGGATGTAAGAA AAATAAAGAAGATACTAAGGTAACTAATGATTTTGACATAAAAATAGCAACAAATTTATTGAATTCTTATATGGAGAGCC TAATTGAAGAAAATATGGAAGGAGCTCAAAAGCTATACTCTAAGAAATTAAAAAAAGATAAAATAAAAAAGGAGAATAAG GACGTAAAAATAAAGGGTTATACTACAGAGCAGATAAATGAAGTGGGGAAATCAGCACTATTTATAGCAAAAGTAGTCAG TGTTAATGTCAAGGAACCCTATACTTCTGTGGAAGAATACAAAATAAGGGTAATAAAAGAAGAAAATGAATATAAAATAG ATGAAGTAAATATAAGTATGGACAAAGAAGCATTTACAAAAAATAATAGAATAAGATATAGAAATAAAAATAATGTTAAA ACGGAGTTAATAATAAAACCATCAACCTTGCCTGATTATTCATATGCAAAGGATGATAAGGCTAATATAGAAAAGCTAAC TGTGCCTAAAAAAAATATAGGACCTATGAGCCTTTCTTATAGTGAAAATTTTATAGCAATATCAACTTATGATAAAAACT CCTATATTGGAATAATAACAATAGATGAATCAAAGGCTGTTCAAGGAGGTCAAGATCAAGGAGATCAAGGAGGTCAAGGA GGTCAAGGAGAGCAAGGCGGCGCTGGAGGTGGTGAAACAAGGCAAGAAGCAACAGATATAATGGAGGAGATTGGAGAAAA GCCTATAGGTAAGGAAATATCTTCCTTAGATTTATTAAAGGGAAGTAAAATAGATTTTATGGTGTTTTCTCCTGATGAAA AATTTATAGCAGTTCAATATGAAACTAGTGATAAAACAAAAAATACAAGAATATATCAAGCTGATAGTGCAGACATAATA CCTTTTAAGATGGAGGATAAATTTCCTTTAAATAAAGTAAATGTAACATTGTCTTCTTTTGCTACAGATTCTATAATATT TAATGTATCTAGTAAAGAAAAAAATGATAAAAACTTAACTGAATTTATTGGTAAGTGGCAACTGGATTTAAAAGAATTTA AAGTTAAAAAAATGTAG
Upstream 100 bases:
>100_bases ATATATATATAAAAATAAAAATAATGATTTTTAATTAAATTTTCTTTTTAAGGAGAAAATAAAAGTAAATGGTGAATTAA ATAAGGGAGGGAAGAAAATA
Downstream 100 bases:
>100_bases TTGTTTTGAAAAAAAAGTATCTGTGACATATAATATTCACAGATACTTTTTTTTGGAGGAATTTATTATGGAAAGAAAAT GGTATGATAAGCCATATCAT
Product: putative phage head-tail adaptor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MYYRNFAKKIIIFLIFTTTISLFGCKKNKEDTKVTNDFDIKIATNLLNSYMESLIEENMEGAQKLYSKKLKKDKIKKENK DVKIKGYTTEQINEVGKSALFIAKVVSVNVKEPYTSVEEYKIRVIKEENEYKIDEVNISMDKEAFTKNNRIRYRNKNNVK TELIIKPSTLPDYSYAKDDKANIEKLTVPKKNIGPMSLSYSENFIAISTYDKNSYIGIITIDESKAVQGGQDQGDQGGQG GQGEQGGAGGGETRQEATDIMEEIGEKPIGKEISSLDLLKGSKIDFMVFSPDEKFIAVQYETSDKTKNTRIYQADSADII PFKMEDKFPLNKVNVTLSSFATDSIIFNVSSKEKNDKNLTEFIGKWQLDLKEFKVKKM
Sequences:
>Translated_378_residues MYYRNFAKKIIIFLIFTTTISLFGCKKNKEDTKVTNDFDIKIATNLLNSYMESLIEENMEGAQKLYSKKLKKDKIKKENK DVKIKGYTTEQINEVGKSALFIAKVVSVNVKEPYTSVEEYKIRVIKEENEYKIDEVNISMDKEAFTKNNRIRYRNKNNVK TELIIKPSTLPDYSYAKDDKANIEKLTVPKKNIGPMSLSYSENFIAISTYDKNSYIGIITIDESKAVQGGQDQGDQGGQG GQGEQGGAGGGETRQEATDIMEEIGEKPIGKEISSLDLLKGSKIDFMVFSPDEKFIAVQYETSDKTKNTRIYQADSADII PFKMEDKFPLNKVNVTLSSFATDSIIFNVSSKEKNDKNLTEFIGKWQLDLKEFKVKKM >Mature_378_residues MYYRNFAKKIIIFLIFTTTISLFGCKKNKEDTKVTNDFDIKIATNLLNSYMESLIEENMEGAQKLYSKKLKKDKIKKENK DVKIKGYTTEQINEVGKSALFIAKVVSVNVKEPYTSVEEYKIRVIKEENEYKIDEVNISMDKEAFTKNNRIRYRNKNNVK TELIIKPSTLPDYSYAKDDKANIEKLTVPKKNIGPMSLSYSENFIAISTYDKNSYIGIITIDESKAVQGGQDQGDQGGQG GQGEQGGAGGGETRQEATDIMEEIGEKPIGKEISSLDLLKGSKIDFMVFSPDEKFIAVQYETSDKTKNTRIYQADSADII PFKMEDKFPLNKVNVTLSSFATDSIIFNVSSKEKNDKNLTEFIGKWQLDLKEFKVKKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42946; Mature: 42946
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYRNFAKKIIIFLIFTTTISLFGCKKNKEDTKVTNDFDIKIATNLLNSYMESLIEENME CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH GAQKLYSKKLKKDKIKKENKDVKIKGYTTEQINEVGKSALFIAKVVSVNVKEPYTSVEEY HHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCHHHEEEEHEEEEECCCCCCCCCEE KIRVIKEENEYKIDEVNISMDKEAFTKNNRIRYRNKNNVKTELIIKPSTLPDYSYAKDDK EEEEEECCCCEEEEEEEEEECHHHHCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCC ANIEKLTVPKKNIGPMSLSYSENFIAISTYDKNSYIGIITIDESKAVQGGQDQGDQGGQG CCCEEEECCCCCCCCEEEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCC GQGEQGGAGGGETRQEATDIMEEIGEKPIGKEISSLDLLKGSKIDFMVFSPDEKFIAVQY CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEE ETSDKTKNTRIYQADSADIIPFKMEDKFPLNKVNVTLSSFATDSIIFNVSSKEKNDKNLT ECCCCCCCCEEEECCCCCEEEEECCCCCCCCEEEEEHHHCCCCEEEEEECCCCCCCCHHH EFIGKWQLDLKEFKVKKM HHHHHHCCCHHHHHCCCC >Mature Secondary Structure MYYRNFAKKIIIFLIFTTTISLFGCKKNKEDTKVTNDFDIKIATNLLNSYMESLIEENME CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH GAQKLYSKKLKKDKIKKENKDVKIKGYTTEQINEVGKSALFIAKVVSVNVKEPYTSVEEY HHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCHHHEEEEHEEEEECCCCCCCCCEE KIRVIKEENEYKIDEVNISMDKEAFTKNNRIRYRNKNNVKTELIIKPSTLPDYSYAKDDK EEEEEECCCCEEEEEEEEEECHHHHCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCC ANIEKLTVPKKNIGPMSLSYSENFIAISTYDKNSYIGIITIDESKAVQGGQDQGDQGGQG CCCEEEECCCCCCCCEEEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCC GQGEQGGAGGGETRQEATDIMEEIGEKPIGKEISSLDLLKGSKIDFMVFSPDEKFIAVQY CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEE ETSDKTKNTRIYQADSADIIPFKMEDKFPLNKVNVTLSSFATDSIIFNVSSKEKNDKNLT ECCCCCCCCEEEECCCCCEEEEECCCCCCCCEEEEEHHHCCCCEEEEEECCCCCCCCHHH EFIGKWQLDLKEFKVKKM HHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA