| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is celB [H]
Identifier: 148381300
GI number: 148381300
Start: 3591812
End: 3593104
Strand: Reverse
Name: celB [H]
Synonym: CBO3359
Alternate gene names: 148381300
Gene position: 3593104-3591812 (Counterclockwise)
Preceding gene: 148381301
Following gene: 148381299
Centisome position: 92.44
GC content: 32.95
Gene sequence:
>1293_bases ATGAAAAAGTTCTTTGACTGGATGGAAGAGCATTTTGTTCCAATAGCAGCTAAAATAGGTTCTCAAAGGCATTTAGTTGC TATTCGTGATGGTTTTGCTACAATTACTCCAATTATTATGGCAGGGGCTTTTGCAGTATTATTTAATAATTTAGGATGGA AACCATATCAAAATTTTATGAATTGGTTATTACCTGCTAATTGGAAAAATTTTGGTGATGGAGTCTGGAATGGTACTTTC GCTATAATGTCATTATTAGTAGTATTTACTATATCCTATCATTTAGCTAAATCCTATGAAAAAGATGGGTTATCAGCGGG AATTGTATCTCTATCTGCATTATTAATTTTATATAAGCCAACAAAAGATGGAGGGGCAGTACCACTTGAGTTTTTAGGGG GCCAAGGATTATTTGTTGCATTAATAGTTGCATTAATAGCTACAGAAATTTTTGTTAAATTAGCAGGGAATCCAAAATTA ATTATTAAAATGCCAGAGGGAGTTCCACCAGCAGTAGCAAAATCTTTTGCAGCATTATTACCATCAATTATAGTTTTAGC TATTACAGCAGCAGTAAAGCAAATTTTCGGGGCAATAGGAATACCAGATATACACAAAGCATTATTTTCAGCATTACAGG CACCATTGCAAGGTGTAATGGGAAGTTTGGGTGGTTTATTAGTTTTAGTTTTAGTACAGCAATTCTTATGGTTTTTTGGC TTACATGGTTCAAATATACTTGCACCAATTATAAATGCGGTATTGTTACCATTAACAGAAGCTAATGTAAGAGCATTTAA GAATGGAGTTAATCCTGAGCATATAATAAATAGTCAATTTTTAGATTCTTACGTAAATATGGGGGGATCAGGTGCCACTA TAGCTTTATTAATTGCAATATTCATAATTGGAAGAAAGAGCAAATCACAAAAGACTATTGCAAATCTAAGTATAGCACCA GGAATGTTCAATATAAATGAACCTGTTATATTCGGTTTACCAATAATTTTAAATCCAATATACTTTATACCATTTATACT AGCACCATTGGCATCTGGAGTGATTGCATATGTATTAACTTTTATAGGGTTTGCACCTAAAGTTGTAGTAATGGCTCACT GGACGACACCACCAATATTAGGAGCCATTATATCAACAAATTCACTAAGGGGCGGAATTACAGCTCTTATTTGTATGGTA GTCAGCATAATAATATATATACCATTTGTTCGCATAGCTACAAAGAAAGACCAAAAAAATACAGTAGAGGTAGAGAAAAC ACATTCAATTTAA
Upstream 100 bases:
>100_bases AGAAGAAAATTTTAAATAACGATCATTTCAAAATAGATTACTATTATTAATTATTTATAAATATATAAAAAATATGTATA GAAAAAGGGGAGGGTTAGAA
Downstream 100 bases:
>100_bases CAACATTTGGTTATAATAAAAGCCGTATGCAATGATGCATACGGTTTTAAATATTTTCCATTTTTGCATAAATTTAATAT GTTACAATATAATTAGATAA
Product: PTS system, lactose/cellobiose family, IIC component
Products: pyruvate; diacetylchitobiose-6-phosphate [Cytoplasm]; cellobiose-6-phosphate [Cytoplasm] [C]
Alternate protein names: EIIC-Lic; PTS system lichenan-specific EIIC component [H]
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MKKFFDWMEEHFVPIAAKIGSQRHLVAIRDGFATITPIIMAGAFAVLFNNLGWKPYQNFMNWLLPANWKNFGDGVWNGTF AIMSLLVVFTISYHLAKSYEKDGLSAGIVSLSALLILYKPTKDGGAVPLEFLGGQGLFVALIVALIATEIFVKLAGNPKL IIKMPEGVPPAVAKSFAALLPSIIVLAITAAVKQIFGAIGIPDIHKALFSALQAPLQGVMGSLGGLLVLVLVQQFLWFFG LHGSNILAPIINAVLLPLTEANVRAFKNGVNPEHIINSQFLDSYVNMGGSGATIALLIAIFIIGRKSKSQKTIANLSIAP GMFNINEPVIFGLPIILNPIYFIPFILAPLASGVIAYVLTFIGFAPKVVVMAHWTTPPILGAIISTNSLRGGITALICMV VSIIIYIPFVRIATKKDQKNTVEVEKTHSI
Sequences:
>Translated_430_residues MKKFFDWMEEHFVPIAAKIGSQRHLVAIRDGFATITPIIMAGAFAVLFNNLGWKPYQNFMNWLLPANWKNFGDGVWNGTF AIMSLLVVFTISYHLAKSYEKDGLSAGIVSLSALLILYKPTKDGGAVPLEFLGGQGLFVALIVALIATEIFVKLAGNPKL IIKMPEGVPPAVAKSFAALLPSIIVLAITAAVKQIFGAIGIPDIHKALFSALQAPLQGVMGSLGGLLVLVLVQQFLWFFG LHGSNILAPIINAVLLPLTEANVRAFKNGVNPEHIINSQFLDSYVNMGGSGATIALLIAIFIIGRKSKSQKTIANLSIAP GMFNINEPVIFGLPIILNPIYFIPFILAPLASGVIAYVLTFIGFAPKVVVMAHWTTPPILGAIISTNSLRGGITALICMV VSIIIYIPFVRIATKKDQKNTVEVEKTHSI >Mature_430_residues MKKFFDWMEEHFVPIAAKIGSQRHLVAIRDGFATITPIIMAGAFAVLFNNLGWKPYQNFMNWLLPANWKNFGDGVWNGTF AIMSLLVVFTISYHLAKSYEKDGLSAGIVSLSALLILYKPTKDGGAVPLEFLGGQGLFVALIVALIATEIFVKLAGNPKL IIKMPEGVPPAVAKSFAALLPSIIVLAITAAVKQIFGAIGIPDIHKALFSALQAPLQGVMGSLGGLLVLVLVQQFLWFFG LHGSNILAPIINAVLLPLTEANVRAFKNGVNPEHIINSQFLDSYVNMGGSGATIALLIAIFIIGRKSKSQKTIANLSIAP GMFNINEPVIFGLPIILNPIYFIPFILAPLASGVIAYVLTFIGFAPKVVVMAHWTTPPILGAIISTNSLRGGITALICMV VSIIIYIPFVRIATKKDQKNTVEVEKTHSI
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788032, Length=444, Percent_Identity=33.3333333333333, Blast_Score=226, Evalue=3e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003352 - InterPro: IPR004796 - InterPro: IPR004501 [H]
Pfam domain/function: PF02378 PTS_EIIC [H]
EC number: NA
Molecular weight: Translated: 46325; Mature: 46325
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS51105 PTS_EIIC_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFFDWMEEHFVPIAAKIGSQRHLVAIRDGFATITPIIMAGAFAVLFNNLGWKPYQNFM CCHHHHHHHHHCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH NWLLPANWKNFGDGVWNGTFAIMSLLVVFTISYHLAKSYEKDGLSAGIVSLSALLILYKP HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEC TKDGGAVPLEFLGGQGLFVALIVALIATEIFVKLAGNPKLIIKMPEGVPPAVAKSFAALL CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH PSIIVLAITAAVKQIFGAIGIPDIHKALFSALQAPLQGVMGSLGGLLVLVLVQQFLWFFG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LHGSNILAPIINAVLLPLTEANVRAFKNGVNPEHIINSQFLDSYVNMGGSGATIALLIAI CCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH FIIGRKSKSQKTIANLSIAPGMFNINEPVIFGLPIILNPIYFIPFILAPLASGVIAYVLT HHHCCCCCCHHHHHHCEECCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH FIGFAPKVVVMAHWTTPPILGAIISTNSLRGGITALICMVVSIIIYIPFVRIATKKDQKN HHCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TVEVEKTHSI CEEEHHCCCC >Mature Secondary Structure MKKFFDWMEEHFVPIAAKIGSQRHLVAIRDGFATITPIIMAGAFAVLFNNLGWKPYQNFM CCHHHHHHHHHCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH NWLLPANWKNFGDGVWNGTFAIMSLLVVFTISYHLAKSYEKDGLSAGIVSLSALLILYKP HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEC TKDGGAVPLEFLGGQGLFVALIVALIATEIFVKLAGNPKLIIKMPEGVPPAVAKSFAALL CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH PSIIVLAITAAVKQIFGAIGIPDIHKALFSALQAPLQGVMGSLGGLLVLVLVQQFLWFFG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LHGSNILAPIINAVLLPLTEANVRAFKNGVNPEHIINSQFLDSYVNMGGSGATIALLIAI CCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH FIIGRKSKSQKTIANLSIAPGMFNINEPVIFGLPIILNPIYFIPFILAPLASGVIAYVLT HHHCCCCCCHHHHHHCEECCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH FIGFAPKVVVMAHWTTPPILGAIISTNSLRGGITALICMVVSIIIYIPFVRIATKKDQKN HHCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TVEVEKTHSI CEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: diacetylchitobiose [Periplasm]; phosphoenolpyruvate; cellobiose [Periplasm] [C]
Specific reaction: phosphoenolpyruvate + diacetylchitobiose [Periplasm] = pyruvate + diacetylchitobiose-6-phosphate [Cytoplasm] phosphoenolpyruvate + cellobiose [Periplasm] = cellobiose-6-phosphate [Cytoplasm] + pyruvate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8990303; 8969509; 9384377 [H]