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The map label for this gene is oppA [H]

Identifier: 148381099

GI number: 148381099

Start: 3351694

End: 3353376

Strand: Reverse

Name: oppA [H]

Synonym: CBO3150

Alternate gene names: 148381099

Gene position: 3353376-3351694 (Counterclockwise)

Preceding gene: 148381103

Following gene: 148381098

Centisome position: 86.27

GC content: 32.14

Gene sequence:

>1683_bases
GTGAAAAGTAAAAGGTTATTGGCAGCTTTAGTATCTTGTGTGGTTTTAACTTCGGTAGCATTAGCAGGATGTGGAGGAAA
GGAAACTGCATCAGGAAGTAAAGGTGCAGATAAAGAACAATATCTAAATATGATTTTGCAGGAAGAACCTAAAAGTTTAG
ACCCAGCTAAATCAACAGACTTGTATTCTTCACAGGTTATTTCTGAGGTTTATGATGGATTAACAAGATTGGAAGTAGAT
GAAAAAGGTAAAGATGTAGTTAAGCCAGCAGGAGCAGAAAAATGGGATGTATCTGAGGATGGATTAAAATGGACTTTTCA
TTTAAGAGATTATGAGTGGTCTGATGGAAAGAAGGTTACTGCAAAGGATTATGAATATGGTATAAAAAGAAACTTAGATC
CTAAAACTGCATCAGAGTATGCTTACTTATTAGCTCCAATAAAAAATGCGAACGAATATAATGCAGGGAAAGCAAAAGCT
GAAGAAGTTGGAGTAAAAGCTTTAGATGATAAAACTTTAGAAATAACTTTAGCTGGACCTTGTGCATATTTCTTAAAGAT
AACATATTTTAAATTAATGATGCCACAAAGACAGGATATAGTTGAAAAGTATGGAGAAAAATTTGGTACAGAAGCTTCTA
ATATGGTATTCTGTGGACCTTTTACCATAAAGGAATGGGTACATGCAAACAAAATGGAATTAGTTAAAAATGAAAAATAT
TGGGATGCTAAATCTGTTAAATTAAATAACGTTCATATGAAAATTATAAATAATGAAGCTGCTAGAATGCAAGAGCTTCT
AAATGGAGGAATAGATTTCAGTGCTGCTCAAAAGCCAGAGTGGAAAGAAAAATTTAAAAAAGCTAATAAGTTTGAAGTGA
AGAGAGTTATTGAACCAGCAACAAATATTGAATTCTTTAATCAAAATGTTAAATTATTTAGCAATGCTAAAGTAAGAAAA
GCTTTTTCTTTATCTATTAACAGAGAAGAGGTTTCAAAAACTTTATTTAAAAATGACTTTACACCAGCCTATGGGTTTGT
GCCACCTTCATTACAAATAGGAGATAAAGAATTTAGAAAAGAAGTAGGGGAAGAACCAATTAAGAAATTGAAAGAAGAGA
ATCAAGATCCAAAGAAACTTTTAATTGAAGGATTAAAAGAATTAGGTATGGATCCAGATCCAAGTAAAGTGACGGTAAAT
TATTTAACAGGCTCTACAAGTGATCAACAAAAAGAAATTTGTGAATTTTTCCAAGAAATGTATCAAAAAGCTTTAGGCAT
TAAAGTAAATATAGAATATGTTCAATGGCCAGTATATGCGAAGAGAATAAATAATGCGGAATATGAAATATCTGGTATGG
CTTGGACAGGAGATTATGATGATCCTATGACAGAATTTGATTTGTGGATGACTGGGGCCAAAGCGATTCCAACAAATTAC
TCAAATGCAAAATATGATGAATTAATTAGAAAAGCTGCATTGTTGCCAGAAGAAAAGAATGAAGAAAGAATGAAGTTATT
CAAAGAGGCTGAACAAATATTATTATATGAAGATGCTGTAATAGCGCCAGCAGTTTATAGGGCTAGAGATATTTATCAAA
GAAAGTATGTAAAGGGAATAATGGTTCCACAATTCGGTTCTTTATATGATGTTAAATATGCCTATACGGAAGGCAGGGAG
TAA

Upstream 100 bases:

>100_bases
AGAAAACATATTTAAAATATAGTTGTTTTAAAATAATTTTTATTGGAAACAGGTGGATTTCCACTTGTTTTTTATAAAAT
AACTTAAAGGGGGAAGTTTA

Downstream 100 bases:

>100_bases
TAGTATTATTTTATGCAGCAGAGCCTTTTAACGGCTCTGCTGTTATAGGTTACATAAAAATATATTGGGGAGGGGTAAAG
ATGTTTAGATATATCTTAAA

Product: oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein

Products: NA

Alternate protein names: Stage 0 sporulation protein KA [H]

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MKSKRLLAALVSCVVLTSVALAGCGGKETASGSKGADKEQYLNMILQEEPKSLDPAKSTDLYSSQVISEVYDGLTRLEVD
EKGKDVVKPAGAEKWDVSEDGLKWTFHLRDYEWSDGKKVTAKDYEYGIKRNLDPKTASEYAYLLAPIKNANEYNAGKAKA
EEVGVKALDDKTLEITLAGPCAYFLKITYFKLMMPQRQDIVEKYGEKFGTEASNMVFCGPFTIKEWVHANKMELVKNEKY
WDAKSVKLNNVHMKIINNEAARMQELLNGGIDFSAAQKPEWKEKFKKANKFEVKRVIEPATNIEFFNQNVKLFSNAKVRK
AFSLSINREEVSKTLFKNDFTPAYGFVPPSLQIGDKEFRKEVGEEPIKKLKEENQDPKKLLIEGLKELGMDPDPSKVTVN
YLTGSTSDQQKEICEFFQEMYQKALGIKVNIEYVQWPVYAKRINNAEYEISGMAWTGDYDDPMTEFDLWMTGAKAIPTNY
SNAKYDELIRKAALLPEEKNEERMKLFKEAEQILLYEDAVIAPAVYRARDIYQRKYVKGIMVPQFGSLYDVKYAYTEGRE

Sequences:

>Translated_560_residues
MKSKRLLAALVSCVVLTSVALAGCGGKETASGSKGADKEQYLNMILQEEPKSLDPAKSTDLYSSQVISEVYDGLTRLEVD
EKGKDVVKPAGAEKWDVSEDGLKWTFHLRDYEWSDGKKVTAKDYEYGIKRNLDPKTASEYAYLLAPIKNANEYNAGKAKA
EEVGVKALDDKTLEITLAGPCAYFLKITYFKLMMPQRQDIVEKYGEKFGTEASNMVFCGPFTIKEWVHANKMELVKNEKY
WDAKSVKLNNVHMKIINNEAARMQELLNGGIDFSAAQKPEWKEKFKKANKFEVKRVIEPATNIEFFNQNVKLFSNAKVRK
AFSLSINREEVSKTLFKNDFTPAYGFVPPSLQIGDKEFRKEVGEEPIKKLKEENQDPKKLLIEGLKELGMDPDPSKVTVN
YLTGSTSDQQKEICEFFQEMYQKALGIKVNIEYVQWPVYAKRINNAEYEISGMAWTGDYDDPMTEFDLWMTGAKAIPTNY
SNAKYDELIRKAALLPEEKNEERMKLFKEAEQILLYEDAVIAPAVYRARDIYQRKYVKGIMVPQFGSLYDVKYAYTEGRE
>Mature_560_residues
MKSKRLLAALVSCVVLTSVALAGCGGKETASGSKGADKEQYLNMILQEEPKSLDPAKSTDLYSSQVISEVYDGLTRLEVD
EKGKDVVKPAGAEKWDVSEDGLKWTFHLRDYEWSDGKKVTAKDYEYGIKRNLDPKTASEYAYLLAPIKNANEYNAGKAKA
EEVGVKALDDKTLEITLAGPCAYFLKITYFKLMMPQRQDIVEKYGEKFGTEASNMVFCGPFTIKEWVHANKMELVKNEKY
WDAKSVKLNNVHMKIINNEAARMQELLNGGIDFSAAQKPEWKEKFKKANKFEVKRVIEPATNIEFFNQNVKLFSNAKVRK
AFSLSINREEVSKTLFKNDFTPAYGFVPPSLQIGDKEFRKEVGEEPIKKLKEENQDPKKLLIEGLKELGMDPDPSKVTVN
YLTGSTSDQQKEICEFFQEMYQKALGIKVNIEYVQWPVYAKRINNAEYEISGMAWTGDYDDPMTEFDLWMTGAKAIPTNY
SNAKYDELIRKAALLPEEKNEERMKLFKEAEQILLYEDAVIAPAVYRARDIYQRKYVKGIMVPQFGSLYDVKYAYTEGRE

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, It binds peptides up to five amino acids long with high affinity. Also required for sporulation and competence [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=538, Percent_Identity=31.0408921933086, Blast_Score=208, Evalue=9e-55,
Organism=Escherichia coli, GI1787495, Length=545, Percent_Identity=29.1743119266055, Blast_Score=201, Evalue=1e-52,
Organism=Escherichia coli, GI1789397, Length=503, Percent_Identity=28.2306163021869, Blast_Score=198, Evalue=9e-52,
Organism=Escherichia coli, GI1789966, Length=499, Percent_Identity=25.250501002004, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787762, Length=514, Percent_Identity=23.7354085603113, Blast_Score=106, Evalue=5e-24,
Organism=Escherichia coli, GI1787052, Length=514, Percent_Identity=25.4863813229572, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1787551, Length=520, Percent_Identity=22.8846153846154, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 63895; Mature: 63895

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKRLLAALVSCVVLTSVALAGCGGKETASGSKGADKEQYLNMILQEEPKSLDPAKSTD
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCH
LYSSQVISEVYDGLTRLEVDEKGKDVVKPAGAEKWDVSEDGLKWTFHLRDYEWSDGKKVT
HHHHHHHHHHHCCHHEEEECCCCCHHCCCCCCCCCCCCCCCCEEEEEEECEECCCCCEEE
AKDYEYGIKRNLDPKTASEYAYLLAPIKNANEYNAGKAKAEEVGVKALDDKTLEITLAGP
CCHHHHHCCCCCCCCCHHCCEEEEEECCCCCCCCCCCCHHHHCCCEEECCCEEEEEEECH
CAYFLKITYFKLMMPQRQDIVEKYGEKFGTEASNMVFCGPFTIKEWVHANKMELVKNEKY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCHHHHHCCCCC
WDAKSVKLNNVHMKIINNEAARMQELLNGGIDFSAAQKPEWKEKFKKANKFEVKRVIEPA
CCCCCEEECCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCC
TNIEFFNQNVKLFSNAKVRKAFSLSINREEVSKTLFKNDFTPAYGFVPPSLQIGDKEFRK
CCHHHHCCCEEEECCCHHEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
EVGEEPIKKLKEENQDPKKLLIEGLKELGMDPDPSKVTVNYLTGSTSDQQKEICEFFQEM
HHCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH
YQKALGIKVNIEYVQWPVYAKRINNAEYEISGMAWTGDYDDPMTEFDLWMTGAKAIPTNY
HHHHCCEEEEEEEEECCHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCC
SNAKYDELIRKAALLPEEKNEERMKLFKEAEQILLYEDAVIAPAVYRARDIYQRKYVKGI
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
MVPQFGSLYDVKYAYTEGRE
CCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MKSKRLLAALVSCVVLTSVALAGCGGKETASGSKGADKEQYLNMILQEEPKSLDPAKSTD
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCH
LYSSQVISEVYDGLTRLEVDEKGKDVVKPAGAEKWDVSEDGLKWTFHLRDYEWSDGKKVT
HHHHHHHHHHHCCHHEEEECCCCCHHCCCCCCCCCCCCCCCCEEEEEEECEECCCCCEEE
AKDYEYGIKRNLDPKTASEYAYLLAPIKNANEYNAGKAKAEEVGVKALDDKTLEITLAGP
CCHHHHHCCCCCCCCCHHCCEEEEEECCCCCCCCCCCCHHHHCCCEEECCCEEEEEEECH
CAYFLKITYFKLMMPQRQDIVEKYGEKFGTEASNMVFCGPFTIKEWVHANKMELVKNEKY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCHHHHHCCCCC
WDAKSVKLNNVHMKIINNEAARMQELLNGGIDFSAAQKPEWKEKFKKANKFEVKRVIEPA
CCCCCEEECCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCC
TNIEFFNQNVKLFSNAKVRKAFSLSINREEVSKTLFKNDFTPAYGFVPPSLQIGDKEFRK
CCHHHHCCCEEEECCCHHEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
EVGEEPIKKLKEENQDPKKLLIEGLKELGMDPDPSKVTVNYLTGSTSDQQKEICEFFQEM
HHCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH
YQKALGIKVNIEYVQWPVYAKRINNAEYEISGMAWTGDYDDPMTEFDLWMTGAKAIPTNY
HHHHCCEEEEEEEEECCHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCC
SNAKYDELIRKAALLPEEKNEERMKLFKEAEQILLYEDAVIAPAVYRARDIYQRKYVKGI
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
MVPQFGSLYDVKYAYTEGRE
CCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]