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The map label for this gene is yrbE [H]

Identifier: 148381058

GI number: 148381058

Start: 3296631

End: 3297740

Strand: Reverse

Name: yrbE [H]

Synonym: CBO3107

Alternate gene names: 148381058

Gene position: 3297740-3296631 (Counterclockwise)

Preceding gene: 148381059

Following gene: 148381057

Centisome position: 84.84

GC content: 31.44

Gene sequence:

>1110_bases
ATGAAAAAATTAAAATTTGCTATTGTTGGTTGTGGAAGAATTTCTTATAAGCATGTAGAAGCTATAATAAATAATAAAGA
AGAAGCTGAATTAGTAGCAGTTTGTGATGTAGTTGAAGAAAAAGCTATAGAGAAGAAAAATGATTATATATCAAAATCAA
GTGAAGAAGTTAATGTAAATATATATACAGATTATAAGGAAATGCTAGAAAAAGAAGAAATAGATGTAGTTACTATAGCT
ACTGAAAGTGGATATCATCCAGAAATAGCTATAAATTGTATGGATAAGAAAAAGCATATAATATGTGAAAAACCTATGGC
ACTATCTGTAGATGATGCAGATAGAATGATAGAATCAGCAAAGAAAAATAATGTTAAACTTTGTGTGAGTCATCAAAATA
GATTTAATAAACCAATACAACAATTAAGAAAGGCAGTAGAAGCTAATAGGTTCGGAAGATTAGTAAACGGTACTGCAAGA
ATACTATGGAATAGAAATATGGGATACTATCATCAAGCACCGTGGAGAGGGACTTGGGAACTTGATGGTGGTACTTTAAT
GAATCAATGTATACACAACATAGATTTGCTTCAATGGATGATGGGCGGAGAAATTGATACAGTCTACGCTCAATGTGATA
CTTTTCTAAGAGATATAGAAGCAGAGGACTTTGGAGCTATAGTAATAAGATTTAAAAATGGAGCTATAGGGATAGTTGAA
GGAAGTGCTTGTGTATATCCTAAAAATTTAGAAGAAACATTAAGTGTATTTGGAGAAAAAGGTACAGCTTGCATAGGTGG
ACTTGCTGTTAATAAAATAGAAACTTGGAAATTTGAAGATGGGGCTGAAAATGAAGAAGAAGATATATTAAAAGCTCAAG
AGGGAGATCCAGATTCAGTATACGGTTTTGGACATACTCCATTATTTAAAGATACAATAGATGCTGTAAAGGAAGATAGA
GCACCTCTAGTAAGTGGGGAAGAAGGGAAAAAAGGTATGGCAATAATATTAGCCGCTTATAAATCAAGACTTACAGGCAT
GCCAGTTAAATTCCCATTTAATAATTTTTCAACAATGGATATGGTAAATGTAGAAAAAATAAATAAATAA

Upstream 100 bases:

>100_bases
ATGTAAAGAATAATAGAGAAAAAATACACAAACTATAATATTAATATTAGGATAAGTTCTTTTGAACTTATCCTAATTAA
TAAAATTTGGAGGTATAGTG

Downstream 100 bases:

>100_bases
TTTATTAAATAAAAATTAAATTTTTAAAATTACCATCAAAATATGATATTATATTATGGTGGTAATTTTAAAATTTTATT
TTAATATAGGAGTGAAAACA

Product: oxidoreductase, NAD-binding Rossmann fold family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MKKLKFAIVGCGRISYKHVEAIINNKEEAELVAVCDVVEEKAIEKKNDYISKSSEEVNVNIYTDYKEMLEKEEIDVVTIA
TESGYHPEIAINCMDKKKHIICEKPMALSVDDADRMIESAKKNNVKLCVSHQNRFNKPIQQLRKAVEANRFGRLVNGTAR
ILWNRNMGYYHQAPWRGTWELDGGTLMNQCIHNIDLLQWMMGGEIDTVYAQCDTFLRDIEAEDFGAIVIRFKNGAIGIVE
GSACVYPKNLEETLSVFGEKGTACIGGLAVNKIETWKFEDGAENEEEDILKAQEGDPDSVYGFGHTPLFKDTIDAVKEDR
APLVSGEEGKKGMAIILAAYKSRLTGMPVKFPFNNFSTMDMVNVEKINK

Sequences:

>Translated_369_residues
MKKLKFAIVGCGRISYKHVEAIINNKEEAELVAVCDVVEEKAIEKKNDYISKSSEEVNVNIYTDYKEMLEKEEIDVVTIA
TESGYHPEIAINCMDKKKHIICEKPMALSVDDADRMIESAKKNNVKLCVSHQNRFNKPIQQLRKAVEANRFGRLVNGTAR
ILWNRNMGYYHQAPWRGTWELDGGTLMNQCIHNIDLLQWMMGGEIDTVYAQCDTFLRDIEAEDFGAIVIRFKNGAIGIVE
GSACVYPKNLEETLSVFGEKGTACIGGLAVNKIETWKFEDGAENEEEDILKAQEGDPDSVYGFGHTPLFKDTIDAVKEDR
APLVSGEEGKKGMAIILAAYKSRLTGMPVKFPFNNFSTMDMVNVEKINK
>Mature_369_residues
MKKLKFAIVGCGRISYKHVEAIINNKEEAELVAVCDVVEEKAIEKKNDYISKSSEEVNVNIYTDYKEMLEKEEIDVVTIA
TESGYHPEIAINCMDKKKHIICEKPMALSVDDADRMIESAKKNNVKLCVSHQNRFNKPIQQLRKAVEANRFGRLVNGTAR
ILWNRNMGYYHQAPWRGTWELDGGTLMNQCIHNIDLLQWMMGGEIDTVYAQCDTFLRDIEAEDFGAIVIRFKNGAIGIVE
GSACVYPKNLEETLSVFGEKGTACIGGLAVNKIETWKFEDGAENEEEDILKAQEGDPDSVYGFGHTPLFKDTIDAVKEDR
APLVSGEEGKKGMAIILAAYKSRLTGMPVKFPFNNFSTMDMVNVEKINK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=205, Percent_Identity=29.2682926829268, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI87082405, Length=379, Percent_Identity=24.0105540897098, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41511; Mature: 41511

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLKFAIVGCGRISYKHVEAIINNKEEAELVAVCDVVEEKAIEKKNDYISKSSEEVNVN
CCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
IYTDYKEMLEKEEIDVVTIATESGYHPEIAINCMDKKKHIICEKPMALSVDDADRMIESA
EEECHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCEEECCHHHHHHHHH
KKNNVKLCVSHQNRFNKPIQQLRKAVEANRFGRLVNGTARILWNRNMGYYHQAPWRGTWE
CCCCEEEEEECCHHCHHHHHHHHHHHHHHHCCHHHCCEEEEEEECCCCCEECCCCCEEEE
LDGGTLMNQCIHNIDLLQWMMGGEIDTVYAQCDTFLRDIEAEDFGAIVIRFKNGAIGIVE
ECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEE
GSACVYPKNLEETLSVFGEKGTACIGGLAVNKIETWKFEDGAENEEEDILKAQEGDPDSV
CCEEECCCCHHHHHHHHCCCCCEEECCEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCE
YGFGHTPLFKDTIDAVKEDRAPLVSGEEGKKGMAIILAAYKSRLTGMPVKFPFNNFSTMD
EECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCEEECCCCCCCEE
MVNVEKINK
EECHHHCCC
>Mature Secondary Structure
MKKLKFAIVGCGRISYKHVEAIINNKEEAELVAVCDVVEEKAIEKKNDYISKSSEEVNVN
CCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
IYTDYKEMLEKEEIDVVTIATESGYHPEIAINCMDKKKHIICEKPMALSVDDADRMIESA
EEECHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCEEECCHHHHHHHHH
KKNNVKLCVSHQNRFNKPIQQLRKAVEANRFGRLVNGTARILWNRNMGYYHQAPWRGTWE
CCCCEEEEEECCHHCHHHHHHHHHHHHHHHCCHHHCCEEEEEEECCCCCEECCCCCEEEE
LDGGTLMNQCIHNIDLLQWMMGGEIDTVYAQCDTFLRDIEAEDFGAIVIRFKNGAIGIVE
ECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEE
GSACVYPKNLEETLSVFGEKGTACIGGLAVNKIETWKFEDGAENEEEDILKAQEGDPDSV
CCEEECCCCHHHHHHHHCCCCCEEECCEEECCEEEEECCCCCCCCHHHHHHCCCCCCCCE
YGFGHTPLFKDTIDAVKEDRAPLVSGEEGKKGMAIILAAYKSRLTGMPVKFPFNNFSTMD
EECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCEEECCCCCCCEE
MVNVEKINK
EECHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]