| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is wzx
Identifier: 148381056
GI number: 148381056
Start: 3294447
End: 3295754
Strand: Reverse
Name: wzx
Synonym: CBO3105
Alternate gene names: NA
Gene position: 3295754-3294447 (Counterclockwise)
Preceding gene: 148381057
Following gene: 148381055
Centisome position: 84.79
GC content: 24.69
Gene sequence:
>1308_bases TTGAGTTATAAGAGGAATATTGCAAGTAATTTTTTAACACAAATAATAGCATCAGCTATAGGCTTTTTTACTAGTATTAT AGTTGCTAGAGCATTAGGACCACAGGATAAAGGCTATGCTGCATATATACTATTAATATTTAATTTGATAGGGGAATATG GTCATTTCGGAATAACTAGTGCTAGTACGTATTTTCAAAAGAAGACTAAATATTCTGCTAAAGAGGTTTATGATACTAAT ATTACTTATTTGTTTATAGTATTTAGTATAATATCTTTGACTATAATAATTTTAAAGTCAACCGGATTTTTTTTAGTTGA TTATAGTTGGTCTTTAATTATAGCTGGATTTAGTATTGTACTTTGTACATTTTTAAATACAATTCTTATAAATTTTTATG TAGCAGACGAAAGGATACCGGAGGCTAATAAATGTAATTTAATAATGAATTTCTTAAAATCTATTCTTATTTTGATACTA TGGATATTCGGTAATTTAAATGTCTTTACCTTTGTTTTATGTCAATTTATACCATTTATAGTTTCTATTTTAATTTTATA TAAGAATCTTGGTATAACGTATAATATTGGATTTAACAAACAATTATTAAAATCAGAGTTTAAATTTGGAATAGTAATTT ATTTAGCAACTTTGTTTATTTATTTAAATTATAGAATGGATCAAATTTTTATAAAAAATATGTTGGGAGAACAGCAATTA GGTATATATTCTATTGCCGTATCCTTAGCTGAATTATTATTCTTGATACCAGGAAGTGTAGGAACCGCCATACTTGGAAG ATTGTATAATATAAAAGATAACAATAAAGAGAAAAAGTATATATTATCCATGACTGTAAAATATACGTTTTATATATGTT TGTTTATTGGAATTTTAGGAATAATGATGACACCTTTAATACCATATGTTTATGGTAAGGAATTTGCATCAGCGAAATCA TCCACTATAATTTTATTTATTGGAATTATATTTGCATCAATAGGTAAGGTATCTTCTTCTTATTTTCAAAGCGAAGGAGC ACCAATAATACACATGGTTATTACATTAATTACCTTTTTAGCTAATTTACTTTTAAATGCTTTATTTATACCTAAATGGG GTATTGATGGTGCGGCAGCTGCATCTACAATATCATATATTTTATATGGATTAGTATATGTTGTGTTTTTTAAACAGAAA GAAGATTTTAAGATTAGTGATTTTTTTATGTTTAATAAAAATGATTATAATATACTTATAAAAAATAATCCTTTTTTAAA CAGCTTAAGAAAGAGGAATAAAAAATAA
Upstream 100 bases:
>100_bases GATAGTTGCAGGAGTACCAGCTAAAATATTTAATGATGTACCAAAAGAACAGTTGTTAGAAAATCAATAGCTAAAAATAT GGATTAAAGGGTGTTTTAAG
Downstream 100 bases:
>100_bases ATTAAAATAAAAATTTTATTTTAATTGGAGGATAATATGAAAATTAATTTTAATAAAATTAAAAACAATTTTAAGAATAA ATATATAATTTTTTTCGCTA
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: O-Antigen Flippase; Hapothetical Protein
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSYKRNIASNFLTQIIASAIGFFTSIIVARALGPQDKGYAAYILLIFNLIGEYGHFGITSASTYFQKKTKYSAKEVYDTN ITYLFIVFSIISLTIIILKSTGFFLVDYSWSLIIAGFSIVLCTFLNTILINFYVADERIPEANKCNLIMNFLKSILILIL WIFGNLNVFTFVLCQFIPFIVSILILYKNLGITYNIGFNKQLLKSEFKFGIVIYLATLFIYLNYRMDQIFIKNMLGEQQL GIYSIAVSLAELLFLIPGSVGTAILGRLYNIKDNNKEKKYILSMTVKYTFYICLFIGILGIMMTPLIPYVYGKEFASAKS STIILFIGIIFASIGKVSSSYFQSEGAPIIHMVITLITFLANLLLNALFIPKWGIDGAAAASTISYILYGLVYVVFFKQK EDFKISDFFMFNKNDYNILIKNNPFLNSLRKRNKK
Sequences:
>Translated_435_residues MSYKRNIASNFLTQIIASAIGFFTSIIVARALGPQDKGYAAYILLIFNLIGEYGHFGITSASTYFQKKTKYSAKEVYDTN ITYLFIVFSIISLTIIILKSTGFFLVDYSWSLIIAGFSIVLCTFLNTILINFYVADERIPEANKCNLIMNFLKSILILIL WIFGNLNVFTFVLCQFIPFIVSILILYKNLGITYNIGFNKQLLKSEFKFGIVIYLATLFIYLNYRMDQIFIKNMLGEQQL GIYSIAVSLAELLFLIPGSVGTAILGRLYNIKDNNKEKKYILSMTVKYTFYICLFIGILGIMMTPLIPYVYGKEFASAKS STIILFIGIIFASIGKVSSSYFQSEGAPIIHMVITLITFLANLLLNALFIPKWGIDGAAAASTISYILYGLVYVVFFKQK EDFKISDFFMFNKNDYNILIKNNPFLNSLRKRNKK >Mature_434_residues SYKRNIASNFLTQIIASAIGFFTSIIVARALGPQDKGYAAYILLIFNLIGEYGHFGITSASTYFQKKTKYSAKEVYDTNI TYLFIVFSIISLTIIILKSTGFFLVDYSWSLIIAGFSIVLCTFLNTILINFYVADERIPEANKCNLIMNFLKSILILILW IFGNLNVFTFVLCQFIPFIVSILILYKNLGITYNIGFNKQLLKSEFKFGIVIYLATLFIYLNYRMDQIFIKNMLGEQQLG IYSIAVSLAELLFLIPGSVGTAILGRLYNIKDNNKEKKYILSMTVKYTFYICLFIGILGIMMTPLIPYVYGKEFASAKSS TIILFIGIIFASIGKVSSSYFQSEGAPIIHMVITLITFLANLLLNALFIPKWGIDGAAAASTISYILYGLVYVVFFKQKE DFKISDFFMFNKNDYNILIKNNPFLNSLRKRNKK
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49418; Mature: 49286
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYKRNIASNFLTQIIASAIGFFTSIIVARALGPQDKGYAAYILLIFNLIGEYGHFGITS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC ASTYFQKKTKYSAKEVYDTNITYLFIVFSIISLTIIILKSTGFFLVDYSWSLIIAGFSIV HHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHH LCTFLNTILINFYVADERIPEANKCNLIMNFLKSILILILWIFGNLNVFTFVLCQFIPFI HHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VSILILYKNLGITYNIGFNKQLLKSEFKFGIVIYLATLFIYLNYRMDQIFIKNMLGEQQL HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH GIYSIAVSLAELLFLIPGSVGTAILGRLYNIKDNNKEKKYILSMTVKYTFYICLFIGILG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHH IMMTPLIPYVYGKEFASAKSSTIILFIGIIFASIGKVSSSYFQSEGAPIIHMVITLITFL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ANLLLNALFIPKWGIDGAAAASTISYILYGLVYVVFFKQKEDFKISDFFMFNKNDYNILI HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEE KNNPFLNSLRKRNKK CCCCHHHHHHHCCCC >Mature Secondary Structure SYKRNIASNFLTQIIASAIGFFTSIIVARALGPQDKGYAAYILLIFNLIGEYGHFGITS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC ASTYFQKKTKYSAKEVYDTNITYLFIVFSIISLTIIILKSTGFFLVDYSWSLIIAGFSIV HHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHH LCTFLNTILINFYVADERIPEANKCNLIMNFLKSILILILWIFGNLNVFTFVLCQFIPFI HHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VSILILYKNLGITYNIGFNKQLLKSEFKFGIVIYLATLFIYLNYRMDQIFIKNMLGEQQL HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH GIYSIAVSLAELLFLIPGSVGTAILGRLYNIKDNNKEKKYILSMTVKYTFYICLFIGILG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHH IMMTPLIPYVYGKEFASAKSSTIILFIGIIFASIGKVSSSYFQSEGAPIIHMVITLITFL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ANLLLNALFIPKWGIDGAAAASTISYILYGLVYVVFFKQKEDFKISDFFMFNKNDYNILI HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEE KNNPFLNSLRKRNKK CCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA