| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is wecB [C]
Identifier: 148381051
GI number: 148381051
Start: 3288615
End: 3289673
Strand: Reverse
Name: wecB [C]
Synonym: CBO3100
Alternate gene names: 148381051
Gene position: 3289673-3288615 (Counterclockwise)
Preceding gene: 148381052
Following gene: 148381050
Centisome position: 84.63
GC content: 28.52
Gene sequence:
>1059_bases ATGAAGATATTAACAGTAGTTGGTGCACGTCCACAATTTATAAAAGCAGCAGCAGTTTCAAATATAATAAGAAAAGAGCA TACGGAAATATTAGTTCATACTGGACAACATTATGATGAAAATATGTCTAAAATATTTTTTGAAGAATTAAGAATACCTA AGCCAGATTATAATTTAGAAATAGGTTCAGGTAATCATGGTGAACAGACAGGTAAAATGCTTATAGAATTAGAAAAAATA TATTTAAAAGAAAAACCGGATTTAGTATTAGTGTATGGAGATACAAATTCTACGTTAGCAGGGGCTTTGTGTGCAAGTAA ATTGTTAATACCTGTAGCCCATGTAGAAGCTGGTCTTAGAAGCTTTAATATGAATATGCCAGAAGAACAAAATAGAATTC TTACAGATCATATATCAAAGTTATTATTTGTACCTACAGTTACAGCAGAAAAAAATCTTCATACTGAGGGAGTTAATAAT GGTGTTCATAATGTAGGAGATGTAATGTTTGATGCTGTATTACATTTTAAGAAATTAGCAGAAGAAAAGGAAAGTATACT AGATAAAATCTCTATAAAATCTGGAGAATATATTTTAACAACAATACATAGAGCAGAAAACACTAATGATATAAATAGAT TGAAAAATATAATAGAGGCATTAAATGAAAGTGGAAAGTCAATAGTATTACCACTTCATCCAAGAACTAAAAAATATATA GAAGATTATAATTTACAATTTAATGATAATATAAAATTAATAGAGCCAGTAGGATATCTTGATATGATTACTTTAGAAAT GAATTCACAAAAGATAGTTACTGATAGTGGTGGAGTTCAAAAAGAAGCTTTCTTTATGGAAAAACCTTGTGTTACTATGA GAGATGAAACAGAGTGGGTAGAGACCGTAGAAAATGGATGGAATGTAATAGTAGGTACAGATAAAGAAAAAATATTAAAT GCTGTAGTGAATTTTAAGCCTGAAAAAGAACAACAAGAAATATTTGGAAATGGTCATGCAGCGGAAAAAATATTAGATAT AATAAACAAAATGAAGTAA
Upstream 100 bases:
>100_bases AGACAGGAAGAAAATTTGTGGAAGATAATTTTAATATAGAAGATAATTTTAATAATGTAGATATAATATATAAATCTATA ATAGATGGAGGAGATAATTA
Downstream 100 bases:
>100_bases TTATTTTGAGGTGATAATATGAAAATCCTATTTTTGACTCAATACTGTCCACCTGAAGTTGGAGCACCTCAAAATAGAAT TTTTGAGTTTGCAAAGCAAC
Product: UDP-N-acetylglucosamine 2-epimerase
Products: UDP-N-acetyl-D-mannosamine
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKILTVVGARPQFIKAAAVSNIIRKEHTEILVHTGQHYDENMSKIFFEELRIPKPDYNLEIGSGNHGEQTGKMLIELEKI YLKEKPDLVLVYGDTNSTLAGALCASKLLIPVAHVEAGLRSFNMNMPEEQNRILTDHISKLLFVPTVTAEKNLHTEGVNN GVHNVGDVMFDAVLHFKKLAEEKESILDKISIKSGEYILTTIHRAENTNDINRLKNIIEALNESGKSIVLPLHPRTKKYI EDYNLQFNDNIKLIEPVGYLDMITLEMNSQKIVTDSGGVQKEAFFMEKPCVTMRDETEWVETVENGWNVIVGTDKEKILN AVVNFKPEKEQQEIFGNGHAAEKILDIINKMK
Sequences:
>Translated_352_residues MKILTVVGARPQFIKAAAVSNIIRKEHTEILVHTGQHYDENMSKIFFEELRIPKPDYNLEIGSGNHGEQTGKMLIELEKI YLKEKPDLVLVYGDTNSTLAGALCASKLLIPVAHVEAGLRSFNMNMPEEQNRILTDHISKLLFVPTVTAEKNLHTEGVNN GVHNVGDVMFDAVLHFKKLAEEKESILDKISIKSGEYILTTIHRAENTNDINRLKNIIEALNESGKSIVLPLHPRTKKYI EDYNLQFNDNIKLIEPVGYLDMITLEMNSQKIVTDSGGVQKEAFFMEKPCVTMRDETEWVETVENGWNVIVGTDKEKILN AVVNFKPEKEQQEIFGNGHAAEKILDIINKMK >Mature_352_residues MKILTVVGARPQFIKAAAVSNIIRKEHTEILVHTGQHYDENMSKIFFEELRIPKPDYNLEIGSGNHGEQTGKMLIELEKI YLKEKPDLVLVYGDTNSTLAGALCASKLLIPVAHVEAGLRSFNMNMPEEQNRILTDHISKLLFVPTVTAEKNLHTEGVNN GVHNVGDVMFDAVLHFKKLAEEKESILDKISIKSGEYILTTIHRAENTNDINRLKNIIEALNESGKSIVLPLHPRTKKYI EDYNLQFNDNIKLIEPVGYLDMITLEMNSQKIVTDSGGVQKEAFFMEKPCVTMRDETEWVETVENGWNVIVGTDKEKILN AVVNFKPEKEQQEIFGNGHAAEKILDIINKMK
Specific function: Catalyzes The Reversible Epimerization At C-2 Of UDP-N- Acetylglucosamine (UDP-Glcnac) And Thereby Provides Bacteria With UDP-N-Acetylmannosamine (UDP-Mannac), The Activated Donor Of Mannac Residues. Also Involved In Bacteriophage N4 Adsorption. [C]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=378, Percent_Identity=34.3915343915344, Blast_Score=149, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: 5.1.3.14
Molecular weight: Translated: 39805; Mature: 39805
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILTVVGARPQFIKAAAVSNIIRKEHTEILVHTGQHYDENMSKIFFEELRIPKPDYNLE CEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEE IGSGNHGEQTGKMLIELEKIYLKEKPDLVLVYGDTNSTLAGALCASKLLIPVAHVEAGLR ECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH SFNMNMPEEQNRILTDHISKLLFVPTVTAEKNLHTEGVNNGVHNVGDVMFDAVLHFKKLA HCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH EEKESILDKISIKSGEYILTTIHRAENTNDINRLKNIIEALNESGKSIVLPLHPRTKKYI HHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH EDYNLQFNDNIKLIEPVGYLDMITLEMNSQKIVTDSGGVQKEAFFMEKPCVTMRDETEWV HHCCEEECCCEEEECCCCCEEEEEEEECCCEEEECCCCCCHHHHHHCCCCCCCCCCHHHH ETVENGWNVIVGTDKEKILNAVVNFKPEKEQQEIFGNGHAAEKILDIINKMK HHHHCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKILTVVGARPQFIKAAAVSNIIRKEHTEILVHTGQHYDENMSKIFFEELRIPKPDYNLE CEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEE IGSGNHGEQTGKMLIELEKIYLKEKPDLVLVYGDTNSTLAGALCASKLLIPVAHVEAGLR ECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH SFNMNMPEEQNRILTDHISKLLFVPTVTAEKNLHTEGVNNGVHNVGDVMFDAVLHFKKLA HCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH EEKESILDKISIKSGEYILTTIHRAENTNDINRLKNIIEALNESGKSIVLPLHPRTKKYI HHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH EDYNLQFNDNIKLIEPVGYLDMITLEMNSQKIVTDSGGVQKEAFFMEKPCVTMRDETEWV HHCCEEECCCEEEECCCCCEEEEEEEECCCEEEECCCCCCHHHHHHCCCCCCCCCCHHHH ETVENGWNVIVGTDKEKILNAVVNFKPEKEQQEIFGNGHAAEKILDIINKMK HHHHCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: UDP-N-acetylglucosamine [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.63 {UDP-N-acetylglucosamine}} 1 {UDP-N-acetylmannosamine}} 0.5 {UDP-N-acetylmannosamine}} [C]
Substrates: UDP-N-acetyl-D-glucosamine
Specific reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-mannosamine
General reaction: Epimerization [C]
Inhibitor: PCMB [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA