| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is waaK [H]
Identifier: 148381047
GI number: 148381047
Start: 3283605
End: 3284708
Strand: Reverse
Name: waaK [H]
Synonym: CBO3096
Alternate gene names: 148381047
Gene position: 3284708-3283605 (Counterclockwise)
Preceding gene: 148381048
Following gene: 148381046
Centisome position: 84.51
GC content: 23.01
Gene sequence:
>1104_bases ATGATTAAAATAAAAGTACTTCAAATTATAACAGGTAATGACATAGGCGGAGGAGGAAAGCATGTTTTAAGTTTATGCTA TTATTCTAAAGACTTGTTTCATACTGTATTAGGCTGTATAGGAGAAGGGCCTTTATATGATAAAGCAAAAGATTTAGGGA TAAAAACAACATTATTTAGTAGTAAGTGCTTTTTGAATAAAGAAATAGAGGAATATATAAAGAATAATAATATAGACATA GCTAATTTTCATGGAGCAAAGGCTTTTTTTACTCATTATTTCATTAATAAAAAATTGAATATACCTACAGTAGCCACTGT TCATAGCAATTATAGAGAGGACTTTTTAAATAATAAATTAAAATATCATTTATTTACTCCTTTAAGTATTAAAGGAATAA AGAGTTTTAATAACCATATATGTGTATCAAATTATATAAAGGATATTTTAAATAAAGATAATATAAAAAGTAAAAAGTTT ATAGTTAATAATGGAATAGATTTAAATTATTATAAAGATAAAAAAACTTATAATAATTTAAAAAAGGAATTAAGCATTGA AGAAAAAGATTTTGTATATATAATGATAGCTAGAATGCATCCTATTAAAAATCATAATTTATTAATTGAGGCTTTTTACA AATTAAAAAAGGAATATAAAAATGTAAAATTAATTTTATTAGGAGATGGTGTGGAAGAGGAAAATTTGAAAGGAAAGGTA GACAAACTAAATTTAAATGACAATATTATATTTTTAGGTTTTGAAGAAAATATAGAAGATTATATAAAAATATCAGATAT TAGTATATTAACATCTTTAAATGAAGGAGGAGCACCACCTTTAGTTATATTGGAAAGTGGCATACAAAAAGTGCCTGTAA TAGCTTCAAATGTAGGGGATATATCTTATACTATAAATAAGAATACTGGTTTTTTAATAGATCCTACTTCTGTTCATGAT ATATATGATAAAATGAAGGAAGCCTACAGTAATAAAAATAAATTACATACTTTAGGTGAAAATCTATATAATACTGTAAT TAATAAATACTCTATGGAGAGTTTTTGTAAATCCTATTATGAATGTTATAAAAATCTGATTTAA
Upstream 100 bases:
>100_bases GGACTTTATACATATAAATTATTAATAAATATAAAAAAGGAGTTGTTTAAAACTCCTTTTTTAAATATCATTATATTTGT AAAATATGAAATGTTAGGAG
Downstream 100 bases:
>100_bases TGTTTTGGAGTGGATTAAATGAAGGAAAACAAAGCTTTAAAAAGTTCTGTTTTTGTTATGCTATTAATAATATTAGGAAA AGTCTTTGCACTAATAAGAG
Product: glycosyl transferase, group 1 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MIKIKVLQIITGNDIGGGGKHVLSLCYYSKDLFHTVLGCIGEGPLYDKAKDLGIKTTLFSSKCFLNKEIEEYIKNNNIDI ANFHGAKAFFTHYFINKKLNIPTVATVHSNYREDFLNNKLKYHLFTPLSIKGIKSFNNHICVSNYIKDILNKDNIKSKKF IVNNGIDLNYYKDKKTYNNLKKELSIEEKDFVYIMIARMHPIKNHNLLIEAFYKLKKEYKNVKLILLGDGVEEENLKGKV DKLNLNDNIIFLGFEENIEDYIKISDISILTSLNEGGAPPLVILESGIQKVPVIASNVGDISYTINKNTGFLIDPTSVHD IYDKMKEAYSNKNKLHTLGENLYNTVINKYSMESFCKSYYECYKNLI
Sequences:
>Translated_367_residues MIKIKVLQIITGNDIGGGGKHVLSLCYYSKDLFHTVLGCIGEGPLYDKAKDLGIKTTLFSSKCFLNKEIEEYIKNNNIDI ANFHGAKAFFTHYFINKKLNIPTVATVHSNYREDFLNNKLKYHLFTPLSIKGIKSFNNHICVSNYIKDILNKDNIKSKKF IVNNGIDLNYYKDKKTYNNLKKELSIEEKDFVYIMIARMHPIKNHNLLIEAFYKLKKEYKNVKLILLGDGVEEENLKGKV DKLNLNDNIIFLGFEENIEDYIKISDISILTSLNEGGAPPLVILESGIQKVPVIASNVGDISYTINKNTGFLIDPTSVHD IYDKMKEAYSNKNKLHTLGENLYNTVINKYSMESFCKSYYECYKNLI >Mature_367_residues MIKIKVLQIITGNDIGGGGKHVLSLCYYSKDLFHTVLGCIGEGPLYDKAKDLGIKTTLFSSKCFLNKEIEEYIKNNNIDI ANFHGAKAFFTHYFINKKLNIPTVATVHSNYREDFLNNKLKYHLFTPLSIKGIKSFNNHICVSNYIKDILNKDNIKSKKF IVNNGIDLNYYKDKKTYNNLKKELSIEEKDFVYIMIARMHPIKNHNLLIEAFYKLKKEYKNVKLILLGDGVEEENLKGKV DKLNLNDNIIFLGFEENIEDYIKISDISILTSLNEGGAPPLVILESGIQKVPVIASNVGDISYTINKNTGFLIDPTSVHD IYDKMKEAYSNKNKLHTLGENLYNTVINKYSMESFCKSYYECYKNLI
Specific function: Adds the terminal N-acetyl-D-glucosamine group on the glucose(II) group of LPS [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.56 [H]
Molecular weight: Translated: 42068; Mature: 42068
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKIKVLQIITGNDIGGGGKHVLSLCYYSKDLFHTVLGCIGEGPLYDKAKDLGIKTTLFS CEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEEEEC SKCFLNKEIEEYIKNNNIDIANFHGAKAFFTHYFINKKLNIPTVATVHSNYREDFLNNKL CCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCE KYHLFTPLSIKGIKSFNNHICVSNYIKDILNKDNIKSKKFIVNNGIDLNYYKDKKTYNNL EEEEECCCEEECHHHCCCCEEHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCHHHHHHH KKELSIEEKDFVYIMIARMHPIKNHNLLIEAFYKLKKEYKNVKLILLGDGVEEENLKGKV HHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCE DKLNLNDNIIFLGFEENIEDYIKISDISILTSLNEGGAPPLVILESGIQKVPVIASNVGD EEEECCCCEEEEEECCCCCHHEEEECEEEEEECCCCCCCCEEEEECCCCCCCEEECCCCC ISYTINKNTGFLIDPTSVHDIYDKMKEAYSNKNKLHTLGENLYNTVINKYSMESFCKSYY EEEEEECCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ECYKNLI HHHHHCC >Mature Secondary Structure MIKIKVLQIITGNDIGGGGKHVLSLCYYSKDLFHTVLGCIGEGPLYDKAKDLGIKTTLFS CEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEEEEC SKCFLNKEIEEYIKNNNIDIANFHGAKAFFTHYFINKKLNIPTVATVHSNYREDFLNNKL CCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCE KYHLFTPLSIKGIKSFNNHICVSNYIKDILNKDNIKSKKFIVNNGIDLNYYKDKKTYNNL EEEEECCCEEECHHHCCCCEEHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCHHHHHHH KKELSIEEKDFVYIMIARMHPIKNHNLLIEAFYKLKKEYKNVKLILLGDGVEEENLKGKV HHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCE DKLNLNDNIIFLGFEENIEDYIKISDISILTSLNEGGAPPLVILESGIQKVPVIASNVGD EEEECCCCEEEEEECCCCCHHEEEECEEEEEECCCCCCCCEEEEECCCCCCCEEECCCCC ISYTINKNTGFLIDPTSVHDIYDKMKEAYSNKNKLHTLGENLYNTVINKYSMESFCKSYY EEEEEECCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ECYKNLI HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1657881; 11677609 [H]